RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 INHBAP08476 426 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 MYBP10242 640 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 CCND2P30279 289 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 FMO5P49326 533 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PPP2R2AP63151 447 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 VPS72Q15906 364 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 GADL1Q6ZQY3 521 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 MMS22LQ6ZRQ5 1243 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SH3RF1Q7Z6J0 888 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SRLQ86TD4 932 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TRIM59Q8IWR1 403 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 STK33Q9BYT3 514 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 FEM1BQ9UK73 627 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 MST1RQ04912 1400 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 FAM187AA6NFU0 413 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 CCDC160A6NGH7 325 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 ANXA13P27216 316 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PSMC5P62195 406 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SARNPP82979 210 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 NFIAQ12857 509 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 ZC2HC1CQ53FD0 456 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 SLFN12LQ6IEE8 588 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 BARGINQ6ZT62 677 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 RFX6Q8HWS3 928 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SEMA6BQ9H3T3 888 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SHPRHQ149N8 1683 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TRIM66O15016 1216 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 VEGFAP15692 232 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 IRAK1P51617 712 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PMS2P54278 862 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 BASP1P80723 227 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 MDM2Q00987 491 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 TFDP1Q14186 410 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 STRIP1Q5VSL9 837 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PAPD7Q5XG87 772 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 TMEM270Q6UE05 265 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
VCAN-202ENST00000342785 PDIK1LQ8N165 341 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 FBXL13Q8NEE6 735 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 HAUS1Q96CS2 278 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TUFT1Q9NNX1 390 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 IL17RBQ9NRM6 502 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 INTS13Q9NVM9 706 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 ARHGAP20Q9P2F6 1191 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TTLL3Q9Y4R7 772 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SCINQ9Y6U3 715 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SPATA31A5Q5VU36 1347 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SPATA31A7Q8IWB4 1347 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SLC16A3O15427 465 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 TTI1O43156 1089 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 RFX1P22670 979 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 KLHDC7AQ5VTJ3 777 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TBC1D1Q86TI0 1168 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 NLRP14Q86W24 1093 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TMEM35BQ8NCS4 154 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 RNF25Q96BH1 459 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 AGPAT1Q99943 283 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 NUP85Q9BW27 656 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 MAP7D1Q3KQU3 841 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 CCDC137Q6PK04 289 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 LRP10Q7Z4F1 713 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 CATSPER3Q86XQ3 398 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 GDAP1Q8TB36 358 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 NSUN6Q8TEA1 469 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 FAM149B1Q96BN6 582 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 GABBR1Q9UBS5 961 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PFASO15067 1338 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 SRGAP2CP0DJJ0 459 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 SULF1Q8IWU6 871 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 PSD3Q9NYI0 1048 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 CYP26A1O43174 497 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 ABCD1P33897 745 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 SCARA5Q6ZMJ2 495 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 ERICH1Q86X53 443 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 TRIM50Q86XT4 487 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 SYN2Q92777 582 aaPredicted RBP7.71□□□□□ -1.17
VCAN-202ENST00000342785 KIAA1586Q9HCI6 787 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 APEX2Q9UBZ4 518 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 NAGPAQ9UK23 515 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 NWD1Q149M9 1564 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 MYO3BQ8WXR4 1341 aa7.71□□□□□ -1.17
VCAN-202ENST00000342785 RAD51CO43502 376 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 MSH2P43246 934 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 FAM47EQ6ZV65 393 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 PASD1Q8IV76 773 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SRRM1Q8IYB3 904 aaKnown RBP7.71□□□□□ -1.18
VCAN-202ENST00000342785 TRIM51Q9BSJ1 452 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 MLXIPLQ9NP71 852 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 ENTPD3O75355 529 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 SFNP31947 248 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 USP38Q8NB14 1042 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 ANKRD36BP1Q96IX9 119 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 RTFDC1Q9BY42 306 aaPredicted RBP7.71□□□□□ -1.18
VCAN-202ENST00000342785 ARHGAP23Q9P227 1491 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 CLDN3O15551 220 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 MT-ND3P03897 115 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 PSMC4P43686 418 aa7.71□□□□□ -1.18
VCAN-202ENST00000342785 HERVK_113P62684 666 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms