RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 DYDC2Q96IM9 177 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 PCIF1Q9H4Z3 704 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 CTTNBP2NLQ9P2B4 639 aa17.89■□□□□ 0.45
CDC42EP4-201ENST00000335793 EML1O00423 815 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 BUB1BO60566 1050 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 PLTPP55058 493 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 MAGOHP61326 146 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 ACCSLQ4AC99 568 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 MAGOHBQ96A72 148 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 SELENOSQ9BQE4 189 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 MEFVO15553 781 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 GH2P01242 217 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 EPHA7Q15375 998 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 SYDE2Q5VT97 1194 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 NEUROG2Q9H2A3 272 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 SLC40A1Q9NP59 571 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 TMOD4Q9NZQ9 345 aa17.88■□□□□ 0.45
CDC42EP4-201ENST00000335793 CCDC188H7C350 402 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 OPLAHO14841 1288 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 GAS7O60861 476 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 NDUFB10O96000 172 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 FOSP01100 380 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 BMP3P12645 472 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 NOVP48745 357 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 ADCY2Q08462 1091 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 SNCBQ16143 134 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 HOOK2Q96ED9 719 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 P2RX7Q99572 595 aaKnown RBP17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 PARVGQ9HBI0 331 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 MYH1P12882 1939 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 CRY2Q49AN0 593 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 RINT1Q6NUQ1 792 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 CCDC13Q8IYE1 715 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 MYCBPAPQ8TBZ2 947 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 FAM20AQ96MK3 541 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 HOXD13P35453 343 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 HSPA9P38646 679 aaKnown RBP17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 SP8Q8IXZ3 490 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 ETNPPLQ8TBG4 499 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 ACTRT1Q8TDG2 376 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 DCAF4Q8WV16 495 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 GLG1Q92896 1179 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 TATDN2Q93075 761 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 TMBIM4Q9HC24 238 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 SNX24Q9Y343 169 aa17.87■□□□□ 0.45
CDC42EP4-201ENST00000335793 PYGLP06737 847 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 USP4Q13107 963 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 MTMR3Q13615 1198 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 FOXR2Q6PJQ5 311 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 CCDC25Q86WR0 208 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 SCFD2Q8WU76 684 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 FMO2Q99518 471 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 HAUS2Q9NVX0 235 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 ASTN1O14525 1302 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 LGR5O75473 907 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 SOX5P35711 763 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 RBBP5Q15291 538 aaKnown RBP17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 ZNF746Q6NUN9 644 aaPredicted RBP17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 STXBP4Q6ZWJ1 553 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 TAX1BP1Q86VP1 789 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 SH2D3AQ9BRG2 576 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 BAIAP2L1Q9UHR4 511 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 LAMB2P55268 1798 aa17.86■□□□□ 0.45
CDC42EP4-201ENST00000335793 EYA4O95677 639 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 LMNB1P20700 586 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 DDR1Q08345 913 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 PPP1R9AQ9ULJ8 1098 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 DAAM1Q9Y4D1 1078 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 NAV1Q8NEY1 1877 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 ITFG2Q969R8 447 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 TDRD3Q9H7E2 651 aaKnown RBP17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 DNAJC18Q9H819 358 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 FMO5P49326 533 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 DR1Q01658 176 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 ZNF844Q08AG5 666 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 ITGB3BPQ13352 177 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 NT5DC3Q86UY8 548 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 MREGQ8N565 214 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 LRRC57Q8N9N7 239 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 SAAL1Q96ER3 474 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 CRAMP1Q96RY5 1269 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 UBE2TQ9NPD8 197 aaPredicted RBP17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 NR2E1Q9Y466 385 aa17.85■□□□□ 0.45
CDC42EP4-201ENST00000335793 ARHGEF35A5YM69 484 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 GMNCA6NCL1 334 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 RTN2O75298 545 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 MESDQ14696 234 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 RAB17Q9H0T7 212 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 MYL7Q01449 175 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 CETN1Q12798 172 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 MYO1EQ12965 1108 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 GRIK3Q13003 919 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 MDM1Q8TC05 714 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 THAP2Q9H0W7 228 aa17.84■□□□□ 0.45
CDC42EP4-201ENST00000335793 SUCLA2Q9P2R7 463 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms