RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SCLT1Q96NL6 688 aa12.57□□□□□ -0.4
C9orf85-201ENST00000334731 GCOM2Q9BZD3 368 aaPredicted RBP12.57□□□□□ -0.4
C9orf85-201ENST00000334731 ATP6V0A4Q9HBG4 840 aa12.57□□□□□ -0.4
C9orf85-201ENST00000334731 REV3LO60673 3130 aa12.57□□□□□ -0.4
C9orf85-201ENST00000334731 BDP1A6H8Y1 2624 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 A0A087WZ62 844 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 WNT7AO00755 349 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 ZBTB39O15060 712 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 SLITRK3O94933 977 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 FGFR1P11362 822 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 DNAJB1P25685 340 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 NCAPH2Q6IBW4 605 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 RHPN2Q8IUC4 686 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 KSR1Q8IVT5 923 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 CCDC83Q8IWF9 413 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 DYDC2Q96IM9 177 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 JPH2Q9BR39 696 aaPredicted RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 FDXACB1Q9BRP7 624 aaPredicted RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 LXNQ9BS40 222 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 TYW1Q9NV66 732 aaKnown RBP12.56□□□□□ -0.4
C9orf85-201ENST00000334731 PCDHA12Q9UN75 941 aa12.56□□□□□ -0.4
C9orf85-201ENST00000334731 A0A0U1RQF3 1178 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
C9orf85-201ENST00000334731 NCK2O43639 380 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
C9orf85-201ENST00000334731 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 HYAL1Q12794 435 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 CTTNQ14247 550 aaKnown RBP12.55□□□□□ -0.4
C9orf85-201ENST00000334731 CALCRLQ16602 461 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 CTC1Q2NKJ3 1217 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 OTUD6AQ7L8S5 288 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 ZNF410Q86VK4 478 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 ECHDC2Q86YB7 292 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 EXOC8Q8IYI6 725 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
C9orf85-201ENST00000334731 CASD1Q96PB1 797 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 MTMR9Q96QG7 549 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 HSD17B14Q9BPX1 270 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 TMEM117Q9H0C3 514 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 DHX33Q9H6R0 707 aaKnown RBP12.55□□□□□ -0.4
C9orf85-201ENST00000334731 ZSWIM4Q9H7M6 989 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 CHST12Q9NRB3 414 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 RNF19AQ9NV58 838 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 PPME1Q9Y570 386 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 PCDHB12Q9Y5F1 795 aa12.55□□□□□ -0.4
C9orf85-201ENST00000334731 H3BQ06 376 aaPredicted RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 HOXA2O43364 376 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 CSPG5O95196 566 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 EOMESO95936 686 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 IRS1P35568 1242 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 LTBRP36941 435 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 TXKP42681 527 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 CYP4A11Q02928 519 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 SPOUT1Q5T280 376 aaKnown RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 LRRC55Q6ZSA7 311 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 ZNF598Q86UK7 904 aaKnown RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 TPH2Q8IWU9 490 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 POF1BQ8WVV4 589 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 PRPF31Q8WWY3 499 aaKnown RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 TMEM143Q96AN5 459 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 C8orf76Q96K31 380 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 NLRP4Q96MN2 994 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 EIF2AK1Q9BQI3 630 aaKnown RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 INO80BQ9C086 356 aaPredicted RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 CWH43Q9H720 699 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 TTC12Q9H892 705 aaPredicted RBP12.54□□□□□ -0.4
C9orf85-201ENST00000334731 IFT122Q9HBG6 1241 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 AAASQ9NRG9 546 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 MUC3AQ02505 3323 aa12.54□□□□□ -0.4
C9orf85-201ENST00000334731 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 GRXCR2A6NFK2 248 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 NEMFO60524 1076 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 LYPLA2O95372 231 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 ATP2B1P20020 1258 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 SFPQP23246 707 aaKnown RBP eCLIP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 GTF2F1P35269 517 aaKnown RBP eCLIP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 RFC5P40937 340 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 RBM25P49756 843 aaKnown RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 POLGP54098 1239 aaPredicted RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 CLLU1OSQ5K130 101 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 PTCRAQ6ISU1 281 aaPredicted RBP12.53□□□□□ -0.4
C9orf85-201ENST00000334731 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 COLGALT1Q8NBJ5 622 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 RNF169Q8NCN4 708 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
C9orf85-201ENST00000334731 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms