RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 SNX24Q9Y343 169 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 VIMP08670 466 aaKnown RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 FMO5P49326 533 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 CNTN2Q02246 1040 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 HP1BP3Q5SSJ5 553 aaPredicted RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 FAM160B1Q5W0V3 765 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 RNF149Q8NC42 400 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 CDHR1Q96JP9 859 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 HSD3B7Q9H2F3 369 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 ACP6Q9NPH0 428 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 RNF40O75150 1001 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 SLITRK3O94933 977 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 TUBB4BP68371 445 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 SMAP1Q8IYB5 467 aaPredicted RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 ANKRD42Q8N9B4 389 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 TARS2Q9BW92 718 aaKnown RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 TOPORSQ9NS56 1045 aaPredicted RBP17.31■□□□□ 0.36
SYNM-201ENST00000328642 TTLL3Q9Y4R7 772 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 LRRC37A3O60309 1634 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 PGRMC1O00264 195 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 ADCY8P40145 1251 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 GALCP54803 685 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 DDX42Q86XP3 938 aaKnown RBP eCLIP17.3■□□□□ 0.36
SYNM-201ENST00000328642 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 SPATA4Q8NEY3 305 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 PARP4Q9UKK3 1724 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 CALCAP01258 141 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 NFX1Q12986 1120 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 SYTL5Q8TDW5 730 aaPredicted RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 MAK16Q9BXY0 300 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 ATP6V0A4Q9HBG4 840 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 ANAPC7Q9UJX3 599 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 FAM237AA0A1B0GTK4 181 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 N4BP1O75113 896 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 ICAM1P05362 532 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 IFNAR2P48551 515 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 HERVK_113P62684 666 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 PRKCEQ02156 737 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 C15orf52Q6ZUT6 534 aaKnown RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 LPAR1Q92633 364 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 RPGRIP1Q96KN7 1286 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 NAP1L3Q99457 506 aaPredicted RBP17.3■□□□□ 0.36
SYNM-201ENST00000328642 ADAM33Q9BZ11 813 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 KLHL11Q9NVR0 708 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 AMACRQ9UHK6 382 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 ZNF148Q9UQR1 794 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 ADM5C9JUS6 153 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 JAK3P52333 1124 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 AGPAT3Q9NRZ7 376 aa17.3■□□□□ 0.36
SYNM-201ENST00000328642 TNNC2P02585 160 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 GNGT1P63211 74 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 APOBEC3FQ8IUX4 373 aaKnown RBP17.29■□□□□ 0.36
SYNM-201ENST00000328642 SPATA33Q96N06 139 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 PNKPQ96T60 521 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 TUFT1Q9NNX1 390 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 CNOT8Q9UFF9 292 aaKnown RBP17.29■□□□□ 0.36
SYNM-201ENST00000328642 PLAGL2Q9UPG8 496 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 IKBKGQ9Y6K9 419 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 EBAG9O00559 213 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 TBC1D8O95759 1140 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 CDO1Q16878 200 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 CTNND1O60716 968 aaKnown RBP17.29■□□□□ 0.36
SYNM-201ENST00000328642 CSPG5O95196 566 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 TAF1P21675 1872 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 STAT5BP51692 787 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 BACE1P56817 501 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 RRP1BQ14684 758 aaKnown RBP17.29■□□□□ 0.36
SYNM-201ENST00000328642 ZSCAN26Q16670 478 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 CYP4F22Q6NT55 531 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 TRIM50Q86XT4 487 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 MICALL1Q8N3F8 863 aa17.29■□□□□ 0.36
SYNM-201ENST00000328642 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 PPP1R21Q6ZMI0 780 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 PSMD1Q99460 953 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 ITIH6Q6UXX5 1313 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 TBX3O15119 743 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 ATP9AO75110 1047 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 BFSP1Q12934 665 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 SNRNP35Q16560 246 aaKnown RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 SLC18A3Q16572 532 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 ARMC9Q7Z3E5 817 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 CPA5Q8WXQ8 436 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 PARP2Q9UGN5 583 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 FOXN3O00409 490 aaPredicted RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 TXNP10599 105 aaKnown RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 TBX2Q13207 712 aaPredicted RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 RNF25Q96BH1 459 aaPredicted RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 SPON1Q9HCB6 807 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 RBM12Q9NTZ6 932 aaKnown RBP17.28■□□□□ 0.36
SYNM-201ENST00000328642 TBK1Q9UHD2 729 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 DAAM1Q9Y4D1 1078 aa17.28■□□□□ 0.36
SYNM-201ENST00000328642 PHRF1Q9P1Y6 1649 aaKnown RBP17.27■□□□□ 0.36
SYNM-201ENST00000328642 PDCD2LQ9BRP1 358 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms