RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 SYNGAP1Q96PV0 1343 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 PAPOLAP51003 745 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 ST8SIA6P61647 398 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 SATB1Q01826 763 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 DCP1BQ8IZD4 617 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 N4BP2L2Q92802 583 aaPredicted RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 CHMP6Q96FZ7 201 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 MOSPD1Q9UJG1 213 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 MAN1B1Q9UKM7 699 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 CLTCQ00610 1675 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 CEP170BQ9Y4F5 1589 aaPredicted RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 PGRMC1O00264 195 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 PLSCR1O15162 318 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 HSPA8P11142 646 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 APBA1Q02410 837 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 E2F5Q15329 346 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 KNOP1Q1ED39 458 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 SIRT2Q8IXJ6 389 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 CCDC13Q8IYE1 715 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 RIT2Q99578 217 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 EIF2AK1Q9BQI3 630 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 TMEM63CQ9P1W3 806 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 NR2E3Q9Y5X4 410 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 MYO3AQ8NEV4 1616 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 NRXN1Q9ULB1 1477 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 ECEL1O95672 775 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 SLC4A1P02730 911 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 PCSK1P29120 753 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 CASP14P31944 242 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 ZNF131P52739 623 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 ETF1P62495 437 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 RBP5P82980 135 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 ATG9AQ7Z3C6 839 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 HAUS6Q7Z4H7 955 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 NOP9Q86U38 636 aaKnown RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 CACNA2D3Q8IZS8 1091 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 PBKQ96KB5 322 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 CPVLQ9H3G5 476 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 PRMT7Q9NVM4 692 aaPredicted RBP9.61□□□□□ -0.87
CD28-201ENST00000324106 PPP2R2CQ9Y2T4 447 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 DAAM1Q9Y4D1 1078 aa9.61□□□□□ -0.87
CD28-201ENST00000324106 UBE4BO95155 1302 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 NAALADL2Q58DX5 795 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 CYFIP1Q7L576 1253 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 TEX2Q8IWB9 1127 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 PDIK1LQ8N165 341 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 GPD1LQ8N335 351 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 FAM133AQ8N9E0 248 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 MAP3K14Q99558 947 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 HAUS8Q9BT25 410 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 TMEM39BQ9GZU3 492 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 SFI1A8K8P3 1242 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 EFCAB8A8MWE9 144 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 MIF4GDA9UHW6 222 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 POTECB2RU33 542 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 SOX5P35711 763 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 STX1BP61266 288 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 SEPT6Q14141 434 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 ALKBH5Q6P6C2 394 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 SPATA2LQ8IUW3 424 aaPredicted RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 SRRM1Q8IYB3 904 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 CNPY4Q8N129 248 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 PCDHB8Q9UN66 801 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 STRCQ7RTU9 1775 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 CXCL11O14625 94 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 NMT2O60551 498 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 SRGNP10124 158 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 ITGA4P13612 1032 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 VAMP7P51809 220 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 INHBEP58166 350 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 CDK17Q00537 523 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 SFSWAPQ12872 951 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 RESTQ13127 1097 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 BRD3Q15059 726 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 CEP85LQ5SZL2 805 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 KLC3Q6P597 504 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 RPUSD2Q8IZ73 545 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 ANKRD13CQ8N6S4 541 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 STKLD1Q8NE28 680 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 ASIC4Q96FT7 647 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 AIFM3Q96NN9 605 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 TSPYL2Q9H2G4 693 aaPredicted RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 TJP2Q9UDY2 1190 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 USH1CQ9Y6N9 552 aa9.6□□□□□ -0.87
CD28-201ENST00000324106 PDS5AQ29RF7 1337 aaKnown RBP9.6□□□□□ -0.87
CD28-201ENST00000324106 CTSHP09668 335 aa9.59□□□□□ -0.87
CD28-201ENST00000324106 YWHABP31946 246 aaKnown RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 BASP1P80723 227 aaKnown RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 CYP27A1Q02318 531 aa9.59□□□□□ -0.87
CD28-201ENST00000324106 CYB5R4Q7L1T6 521 aa9.59□□□□□ -0.87
CD28-201ENST00000324106 GUF1Q8N442 669 aaKnown RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 ZFP91Q96JP5 570 aaPredicted RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 EFCC1Q9HA90 598 aa9.59□□□□□ -0.87
CD28-201ENST00000324106 FAM217BQ9NTX9 383 aaPredicted RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 FNDC3AQ9Y2H6 1198 aaKnown RBP9.59□□□□□ -0.87
CD28-201ENST00000324106 PRRG1O14668 218 aa9.59□□□□□ -0.87
CD28-201ENST00000324106 TJP3O95049 919 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms