RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 RNF149Q8NC42 400 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 FBXO22Q8NEZ5 403 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 C17orf80Q9BSJ5 609 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 DACT1Q9NYF0 836 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 KIAA1024Q9UPX6 916 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 VWA3AA6NCI4 1184 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 PHKA2P46019 1235 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 IL17AQ16552 155 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 CMTR2Q8IYT2 770 aaKnown RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 CRIPAKQ8N1N5 446 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 MCPH1Q8NEM0 835 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 ZNF689Q96CS4 500 aaPredicted RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 IFT122Q9HBG6 1241 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 CHST12Q9NRB3 414 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 RWDD3Q9Y3V2 267 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 PP2D1A8MPX8 630 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 GRB10Q13322 594 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 EPC2Q52LR7 807 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 PADI6Q6TGC4 694 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 MAEAQ7L5Y9 396 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 GDPD5Q8WTR4 605 aa16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 POLR3FQ9H1D9 316 aaPredicted RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 ELAC1Q9H777 363 aaKnown RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
TUBA3D-201ENST00000321253 STX6O43752 255 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 CDC25AP30304 524 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 CTNNB1P35222 781 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 ARL2P36404 184 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 FAM189BP81408 668 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 ZRSR1Q15695 479 aaKnown RBP16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 ECM1Q16610 540 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 PAN2Q504Q3 1202 aaKnown RBP16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 TWF2Q6IBS0 349 aaKnown RBP16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 MICALL1Q8N3F8 863 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 BHMT2Q9H2M3 363 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 DNM3Q9UQ16 869 aa16.28■□□□□ 0.2
TUBA3D-201ENST00000321253 COL4A4P53420 1690 aaPredicted RBP16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 HOXA2O43364 376 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 ERLIN2O94905 339 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 CYP11B2P19099 503 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 GLRA2P23416 452 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 RESTQ13127 1097 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 CAPSQ13938 189 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 FAM102BQ5T8I3 360 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 ABI1Q8IZP0 508 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 RNF169Q8NCN4 708 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 ASAP3Q8TDY4 903 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 CDK5RAP3Q96JB5 506 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 AK8Q96MA6 479 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 GPRC5CQ9NQ84 441 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 MTMR6Q9Y217 621 aa16.27■□□□□ 0.2
TUBA3D-201ENST00000321253 A0A0U1RQF3 1178 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 TBKBP1A7MCY6 615 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 SKIP12755 728 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 POU3F3P20264 500 aaPredicted RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 GATMP50440 423 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 PTENP60484 403 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 POU5F1BQ06416 359 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 NCBP1Q09161 790 aaKnown RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 PCBP1Q15365 356 aaKnown RBP eCLIP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 CCDC85BQ15834 202 aaPredicted RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 CLP1Q92989 425 aaKnown RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 AGPAT5Q9NUQ2 364 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 MTCH2Q9Y6C9 303 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 MRPL42Q9Y6G3 142 aaKnown RBP16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 RALGAPA2Q2PPJ7 1873 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 NLRC5Q86WI3 1866 aa16.26■□□□□ 0.19
TUBA3D-201ENST00000321253 LRRIQ4A6NIV6 560 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 LPXNO60711 386 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 EYA4O95677 639 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 EOMESO95936 686 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 FGFR1P11362 822 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 BMPR1AP36894 532 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 GPM6BQ13491 265 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 SPOUT1Q5T280 376 aaKnown RBP16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 MMTAG2Q9BU76 263 aaKnown RBP16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 C11orf84Q9BUA3 381 aaPredicted RBP16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 NT5C3AQ9H0P0 336 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 TRANK1O15050 2925 aa16.25■□□□□ 0.19
TUBA3D-201ENST00000321253 E9PMD0 336 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 H3BNC9 293 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 RB1P06400 928 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 PDIA4P13667 645 aaKnown RBP16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 UBA7P41226 1012 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 RAB27AP51159 221 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 PTPROQ16827 1216 aa16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 IFNLR1Q8IU57 520 aaPredicted RBP16.24■□□□□ 0.19
TUBA3D-201ENST00000321253 KCTD17Q8N5Z5 321 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms