RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 DNAJC7Q99615 494 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 FECHP22830 423 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 SLCO1A2P46721 670 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 CACNA2D1P54289 1103 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ARID5AQ03989 594 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ARL6IP4Q66PJ3 421 aaKnown RBP11.27□□□□□ -0.61
MSRB3-201ENST00000308259 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.61
MSRB3-201ENST00000308259 P2RX5Q93086 422 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 EBF2Q9HAK2 575 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ATP8A2Q9NTI2 1148 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 ZNF180Q9UJW8 692 aa11.27□□□□□ -0.61
MSRB3-201ENST00000308259 POTEMA6NI47 508 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 CACNB1Q02641 598 aaPredicted RBP11.26□□□□□ -0.61
MSRB3-201ENST00000308259 TRIM14Q14142 442 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 SPRED3Q2MJR0 410 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 WDR60Q8WVS4 1066 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 MCUR1Q96AQ8 359 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 COA7Q96BR5 231 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PIGSQ96S52 555 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 IWS1Q96ST2 819 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 TRIM9Q9C026 710 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
MSRB3-201ENST00000308259 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 CYP11B2P19099 503 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PDE6CP51160 858 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PSMD7P51665 324 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 C12orf60Q5U649 245 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 DTX3LQ8TDB6 740 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PRPF31Q8WWY3 499 aaKnown RBP11.26□□□□□ -0.61
MSRB3-201ENST00000308259 ATP8A1Q9Y2Q0 1164 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 DOCK2Q92608 1830 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 LRP5O75197 1615 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 TUFMP49411 452 aaKnown RBP11.26□□□□□ -0.61
MSRB3-201ENST00000308259 ADCY1Q08828 1119 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 KIAA0895Q8NCT3 520 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 TBCKQ8TEA7 893 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 DRC3Q9H069 523 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 NLRC4Q9NPP4 1024 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 KBTBD4Q9NVX7 518 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 PPP1R9AQ9ULJ8 1098 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 MYH14Q7Z406 1995 aaKnown RBP11.26□□□□□ -0.61
MSRB3-201ENST00000308259 CACNA1SQ13698 1873 aa11.26□□□□□ -0.61
MSRB3-201ENST00000308259 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 NVLO15381 856 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SRGNP10124 158 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 TROVE2P10155 538 aaKnown RBP eCLIP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 MAGEA1P43355 309 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 TMED10P49755 219 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 DNM2P50570 870 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 MYBPC3Q14896 1274 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SF3B3Q15393 1217 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SAPCD2Q86UD0 394 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 RAB3IL1Q8TBN0 382 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 AENQ8WTP8 325 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 NMD3Q96D46 503 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 NUDT12Q9BQG2 462 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 MTFR1LQ9H019 292 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SEMA6BQ9H3T3 888 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 DISP2A7MBM2 1401 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 F8W031 263 aaPredicted RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 PSMD14O00487 310 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 RHOBTB3O94955 611 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 EEF1GP26641 437 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 RASSF2P50749 326 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 DHX9Q08211 1270 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 LRRC14Q15048 493 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 RRAGAQ7L523 313 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 BARHL2Q9NY43 387 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 ANKRD36CQ5JPF3 1778 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 OR52Z1P0C646 297 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 DEFB132Q7Z7B7 95 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 THAP9Q9H5L6 903 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 STOML1Q9UBI4 398 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 ANKRD62A6NC57 917 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 DNAJC6O75061 913 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 TDP2O95551 362 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 EIF4A3P38919 411 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 ZBTB16Q05516 673 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 GRM4Q14833 912 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 SREK1Q8WXA9 508 aaKnown RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 MS4A14Q96JA4 679 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 BRD8Q9H0E9 1235 aa11.25□□□□□ -0.61
MSRB3-201ENST00000308259 ARIH1Q9Y4X5 557 aaPredicted RBP11.25□□□□□ -0.61
MSRB3-201ENST00000308259 ZNF233A6NK53 670 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 FAM153BP0C7A2 387 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 EIF4BP23588 611 aaKnown RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 MCL1Q07820 350 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 FAM153CQ494X1 144 aa11.24□□□□□ -0.61
MSRB3-201ENST00000308259 XPO6Q96QU8 1125 aaKnown RBP11.24□□□□□ -0.61
MSRB3-201ENST00000308259 CRAMP1Q96RY5 1269 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms