RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TMX4Q9H1E5 349 aaPredicted RBP26.46■■□□□ 1.83
SPTSSA-201ENST00000298130 TCP10L2B9ZVM9 353 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 ATMINO43313 823 aaPredicted RBP26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 PPP1R12BO60237 982 aaPredicted RBP26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 KAT5Q92993 513 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 CALR3Q96L12 384 aaKnown RBP26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 FRMD4BQ9Y2L6 1034 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 SNX24Q9Y343 169 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 UTP11Q9Y3A2 253 aaKnown RBP26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 H0YHG0 523 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 ECE2O60344 883 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 PSMD10O75832 226 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 NPR1P16066 1061 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 B4GALNT4Q76KP1 1039 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 HS2ST1Q7LGA3 356 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 UNC45AQ9H3U1 944 aa26.45■■□□□ 1.82
SPTSSA-201ENST00000298130 CLRN2A0PK11 232 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 MEFVO15553 781 aaPredicted RBP26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 SHBGP04278 402 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 MYL7Q01449 175 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 DACT2Q5SW24 774 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 SYCE1Q8N0S2 351 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 CCDC26Q8TAB7 109 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 RFFLQ8WZ73 363 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 KRT35Q92764 455 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 GMCL1Q96IK5 515 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 TMEM150BA6NC51 233 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 ATP2C2O75185 946 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 KRT13P13646 458 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 UBE2TQ9NPD8 197 aaPredicted RBP26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 FBXO28Q9NVF7 368 aa26.44■■□□□ 1.82
SPTSSA-201ENST00000298130 LTBP1Q14766 1721 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 CCDC188H7C350 402 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 PLTPP55058 493 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 ICE2Q659A1 982 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 GMCL1P1Q8NEA9 526 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 ATP8B4Q8TF62 1192 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 EFCC1Q9HA90 598 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 TLDC2A0PJX2 215 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 CPP00450 1065 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 GAP43P17677 238 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 GCLMP48507 274 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 STAT2P52630 851 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 IFFO1Q0D2I5 559 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 KCNV1Q6PIU1 500 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 ARHGEF19Q8IW93 802 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 ZNF577Q9BSK1 485 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 IDI2Q9BXS1 227 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 APEX2Q9UBZ4 518 aa26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 GREB1LQ9C091 1923 aaPredicted RBP26.43■■□□□ 1.82
SPTSSA-201ENST00000298130 MMP10P09238 476 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 PODNQ7Z5L7 613 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 CDAN1Q8IWY9 1227 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 C18orf8Q96DM3 657 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 BTBD6Q96KE9 485 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 SCAF8Q9UPN6 1271 aaKnown RBP26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 UBR3Q6ZT12 1888 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 SIPA1L1O43166 1804 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 LMNB1P20700 586 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 GUCY2CP25092 1073 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 MMP14P50281 582 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 POU5F1Q01860 360 aaKnown RBP26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 PPATQ06203 517 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 AOC3Q16853 763 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 SPRED3Q2MJR0 410 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 CYFIP2Q96F07 1278 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 LXNQ9BS40 222 aa26.42■■□□□ 1.82
SPTSSA-201ENST00000298130 A0A0A6YYK5 440 aaPredicted RBP26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 HIP1RO75146 1068 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 HNRNPH1P31943 449 aaKnown RBP26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 COL23A1Q86Y22 540 aaPredicted RBP26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 SLC12A6Q9UHW9 1150 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 ATAD5Q96QE3 1844 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 GTPBP10A4D1E9 387 aaKnown RBP26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 TMEM253P0C7T8 217 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 PRELPP51888 382 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 DR1Q01658 176 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 LRIG3Q6UXM1 1119 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 CTTNBP2NLQ9P2B4 639 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 EMSYQ7Z589 1322 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 PHF20L1A8MW92 1017 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 SLC26A4O43511 780 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 FMO2Q99518 471 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 SLITRK6Q9H5Y7 841 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 ALG6Q9Y672 507 aa26.41■■□□□ 1.82
SPTSSA-201ENST00000298130 K7ENM7 598 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 EIF3DO15371 548 aaKnown RBP eCLIP26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 FAM107AO95990 144 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 GTF2A1P52655 376 aaPredicted RBP26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 DAW1Q8N136 415 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 CBWD1Q9BRT8 395 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 SYT11Q9BT88 431 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 CAND2O75155 1236 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 FTLP02792 175 aaPredicted RBP26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 CYP3A4P08684 503 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 POLR2MP0CAP2 368 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 ALDH1B1P30837 517 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 PPP3CAQ08209 521 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 BFSP1Q12934 665 aa26.4■■□□□ 1.82
SPTSSA-201ENST00000298130 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms