RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 SUPT20HL1Q3ZLR7 823 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 ALKBH5Q6P6C2 394 aaKnown RBP15.25■□□□□ 0.03
NXF1-201ENST00000294172 ANO5Q75V66 913 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 VPS36Q86VN1 386 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 GPC2Q8N158 579 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 KIFC3Q9BVG8 833 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 A1CFQ9NQ94 594 aaKnown RBP15.25■□□□□ 0.03
NXF1-201ENST00000294172 NAGPAQ9UK23 515 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 TELO2Q9Y4R8 837 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 RGS20O76081 388 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 TUBBP07437 444 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 PRKCIP41743 596 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 DRAP1Q14919 205 aaPredicted RBP15.25■□□□□ 0.03
NXF1-201ENST00000294172 TERF2Q15554 542 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 ZNF746Q6NUN9 644 aaPredicted RBP15.25■□□□□ 0.03
NXF1-201ENST00000294172 ZSWIM2Q8NEG5 633 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 FBXO41Q8TF61 875 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 INPP4AQ96PE3 977 aaPredicted RBP15.25■□□□□ 0.03
NXF1-201ENST00000294172 HINFPQ9BQA5 517 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 ANKEF1Q9NU02 776 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
NXF1-201ENST00000294172 LOXHD1Q8IVV2 1947 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 F8VZ95 297 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 EVI5O60447 810 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 FERP16591 822 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 NOP2P46087 812 aaKnown RBP15.24■□□□□ 0.03
NXF1-201ENST00000294172 SOX10P56693 466 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 GTF2BQ00403 316 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 MYBPC2Q14324 1141 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 SMC1AQ14683 1233 aaKnown RBP15.24■□□□□ 0.03
NXF1-201ENST00000294172 ARHGAP44Q17R89 818 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 C10orf76Q5T2E6 689 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 SWSAP1Q6NVH7 229 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 WDR93Q6P2C0 686 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 CEP170P1Q96L14 293 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 STK33Q9BYT3 514 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 HSPBP1Q9NZL4 362 aa15.24■□□□□ 0.03
NXF1-201ENST00000294172 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
NXF1-201ENST00000294172 EMSYQ7Z589 1322 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 FAM170AA1A519 330 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 GOLGA8IPA6NC78 632 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 GOLGA8JA6NMD2 632 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 SPDYE16A6NNV3 312 aaPredicted RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 PEX10O60683 326 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 KCNA2P16389 499 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 SOX5P35711 763 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 VAMP7P51809 220 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 INTS8Q75QN2 995 aaKnown RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 HDXQ7Z353 690 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 XXYLT1Q8NBI6 393 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 SPATA4Q8NEY3 305 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 MS4A14Q96JA4 679 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 APEX2Q9UBZ4 518 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 COL11A1P12107 1806 aaPredicted RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 PHIPQ8WWQ0 1821 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 POLR3GO15318 223 aaPredicted RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 MAFGO15525 162 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 PAFAH1B1P43034 410 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 GCLMP48507 274 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 SMTNP53814 917 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.23■□□□□ 0.035e-8■□□□□ 10.3
NXF1-201ENST00000294172 U2AF1L4Q8WU68 220 aaKnown RBP15.23■□□□□ 0.03
NXF1-201ENST00000294172 TSKSQ9UJT2 592 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 L1RE1Q9UN81 338 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 PPP2R3BQ9Y5P8 575 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 SSC5DA1L4H1 1573 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
NXF1-201ENST00000294172 GRID2IPA4D2P6 1211 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.032e-12■■■□□ 16.8
NXF1-201ENST00000294172 ZNF862O60290 1169 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 USP2O75604 605 aaPredicted RBP15.22■□□□□ 0.03
NXF1-201ENST00000294172 LMNB1P20700 586 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 NPTX2P47972 431 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 NCKAP1LP55160 1127 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 MRPS25P82663 173 aaKnown RBP15.22■□□□□ 0.03
NXF1-201ENST00000294172 DMP1Q13316 513 aaPredicted RBP15.22■□□□□ 0.03
NXF1-201ENST00000294172 RDM1Q8NG50 284 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 ATP6V0A1Q93050 837 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 RLFQ13129 1914 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 TMCO5BA8MYB1 307 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 MAP2K7O14733 419 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 ATP2A1O14983 1001 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 LRRN2O75325 713 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 PSAPP07602 524 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 PPP3CAQ08209 521 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 CETN1Q12798 172 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 VGLL4Q14135 290 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 PTPROQ16827 1216 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 CCDC70Q6NSX1 233 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 GLYCTKQ8IVS8 523 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 IWS1Q96ST2 819 aa15.22■□□□□ 0.03
NXF1-201ENST00000294172 GOLPH3Q9H4A6 298 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms