RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ADHFE1Q8IWW8 467 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 RNF169Q8NCN4 708 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 NSUN7Q8NE18 718 aaKnown RBP28.31■■■□□ 2.12
U2AF1-201ENST00000291552 PPP2R3CQ969Q6 453 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 GCOM2Q9BZD3 368 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-201ENST00000291552 SUCLA2Q9P2R7 463 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-201ENST00000291552 CD207Q9UJ71 328 aa28.31■■■□□ 2.12
U2AF1-201ENST00000291552 A0A0U1RQF3 1178 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 TBX3O15119 743 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 HOXA2O43364 376 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 NDUFV1P49821 464 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 ST3GAL1Q11201 340 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 TMEM31Q5JXX7 168 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 KSR1Q8IVT5 923 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 CYP26B1Q9NR63 512 aa28.3■■■□□ 2.12
U2AF1-201ENST00000291552 RBM10P98175 930 aaKnown RBP28.29■■■□□ 2.12
U2AF1-201ENST00000291552 CSPP1Q1MSJ5 1256 aa28.29■■■□□ 2.12
U2AF1-201ENST00000291552 RHPN2Q8IUC4 686 aa28.29■■■□□ 2.12
U2AF1-201ENST00000291552 LRRC43Q8N309 656 aa28.29■■■□□ 2.12
U2AF1-201ENST00000291552 VN1R2Q8NFZ6 395 aa28.29■■■□□ 2.12
U2AF1-201ENST00000291552 HELQQ8TDG4 1101 aa28.29■■■□□ 2.12
U2AF1-201ENST00000291552 BARX2Q9UMQ3 279 aaPredicted RBP28.29■■■□□ 2.12
U2AF1-201ENST00000291552 JAK2O60674 1132 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 GPR37L1O60883 481 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 SEC24BO95487 1268 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 EYA4O95677 639 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 KRT2P35908 639 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 DNM2P50570 870 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 KCNT2Q6UVM3 1135 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 ZNF410Q86VK4 478 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 WASF1Q92558 559 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 LXNQ9BS40 222 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 RGL1Q9NZL6 768 aa28.28■■■□□ 2.12
U2AF1-201ENST00000291552 WNT7AO00755 349 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 PER2O15055 1255 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 P4HBP07237 508 aaKnown RBP28.27■■■□□ 2.12
U2AF1-201ENST00000291552 CDC42EP1Q00587 391 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 PLCB3Q01970 1234 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 EPHA7Q15375 998 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 DUSP6Q16828 381 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 SMRP1Q8NCR6 262 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 MRPS27Q92552 414 aaKnown RBP28.27■■■□□ 2.12
U2AF1-201ENST00000291552 NAP1L4Q99733 375 aaKnown RBP28.27■■■□□ 2.12
U2AF1-201ENST00000291552 DHX33Q9H6R0 707 aaKnown RBP28.27■■■□□ 2.12
U2AF1-201ENST00000291552 TLE6Q9H808 572 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 DACT1Q9NYF0 836 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 LZTS1Q9Y250 596 aa28.27■■■□□ 2.12
U2AF1-201ENST00000291552 EOMESO95936 686 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 SFPQP23246 707 aaKnown RBP eCLIP28.26■■■□□ 2.11
U2AF1-201ENST00000291552 PHKA2P46019 1235 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 COASYQ13057 564 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 NCAPH2Q6IBW4 605 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 ABI1Q8IZP0 508 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 NLRP4Q96MN2 994 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 ZNF558Q96NG5 402 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 TRAIPQ9BWF2 469 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 IFT122Q9HBG6 1241 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 CHST12Q9NRB3 414 aa28.26■■■□□ 2.11
U2AF1-201ENST00000291552 FOSBP53539 338 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 PLPP4Q5VZY2 271 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 C4orf19Q8IY42 314 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 MICAL1Q8TDZ2 1067 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 DYDC2Q96IM9 177 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 CEP170P1Q96L14 293 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 JPH2Q9BR39 696 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-201ENST00000291552 BMP2KQ9NSY1 1161 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-201ENST00000291552 PIN4Q9Y237 131 aaKnown RBP28.25■■■□□ 2.11
U2AF1-201ENST00000291552 COL4A3BPQ9Y5P4 624 aa28.25■■■□□ 2.11
U2AF1-201ENST00000291552 MEIS3P2A8K0S8 358 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 ZBTB39O15060 712 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 NEK4P51957 841 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 SLC39A11Q8N1S5 342 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 LPPQ93052 612 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 TMEM143Q96AN5 459 aa28.24■■■□□ 2.11
U2AF1-201ENST00000291552 BTBD18B2RXH4 712 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 PPM1AP35813 382 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 CYP4A11Q02928 519 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 KCNC3Q14003 757 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 CTTNQ14247 550 aaKnown RBP28.23■■■□□ 2.11
U2AF1-201ENST00000291552 SLFN12Q8IYM2 578 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 PRPF31Q8WWY3 499 aaKnown RBP28.23■■■□□ 2.11
U2AF1-201ENST00000291552 MINDY3Q9H8M7 445 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 PPME1Q9Y570 386 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 TECTAO75443 2155 aa28.23■■■□□ 2.11
U2AF1-201ENST00000291552 HIDE1A8MVS5 230 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 DCXO43602 365 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 DKC1O60832 514 aaKnown RBP eCLIP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 YWHABP31946 246 aaKnown RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 POLGP54098 1239 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 LONRF3Q496Y0 759 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 TWF2Q6IBS0 349 aaKnown RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 PDE12Q6L8Q7 609 aaKnown RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 CATSPER4Q7RTX7 472 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 DIS3L2Q8IYB7 885 aaKnown RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 SLC7A3Q8WY07 619 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 TCF25Q9BQ70 676 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 INO80BQ9C086 356 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-201ENST00000291552 BRMS1Q9HCU9 246 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 SPG21Q9NZD8 308 aa28.22■■■□□ 2.11
U2AF1-201ENST00000291552 USP15Q9Y4E8 981 aaPredicted RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms