RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CCDC169A6NNP5 214 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 LMNB1P20700 586 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 SFNP31947 248 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 OAZ1P54368 228 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 MRPS25P82663 173 aaKnown RBP21.02■□□□□ 0.96
BRAF-201ENST00000288602 BRD3Q15059 726 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.02■□□□□ 0.96
BRAF-201ENST00000288602 ACCSQ96QU6 501 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 DNAJC12Q9UKB3 198 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 GOLGA5Q8TBA6 731 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 GPRASP2Q96D09 838 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 TMEM206Q9H813 350 aa21.02■□□□□ 0.96
BRAF-201ENST00000288602 ADM5C9JUS6 153 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 MATR3P43243 847 aaKnown RBP eCLIP21.01■□□□□ 0.954e-7■■■■■ 30.2
BRAF-201ENST00000288602 MYL7Q01449 175 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 PTPROQ16827 1216 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 SUPT20HL1Q3ZLR7 823 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 INTS2Q9H0H0 1204 aaKnown RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 GOLPH3Q9H4A6 298 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 HSPBP1Q9NZL4 362 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 NAGPAQ9UK23 515 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 POTEB2H3BUK9 544 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 EVI5O60447 810 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 GTF2BQ00403 316 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 CNTN2Q02246 1040 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 CKAP4Q07065 602 aaKnown RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 DRAP1Q14919 205 aaPredicted RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 ARHGAP44Q17R89 818 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 BEND6Q5SZJ8 279 aaPredicted RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 SLC9A9Q8IVB4 645 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 RNF10Q8N5U6 811 aaKnown RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 BSNDQ8WZ55 320 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 MS4A14Q96JA4 679 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 CEP170P1Q96L14 293 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 LUC7LQ9NQ29 371 aaKnown RBP21.01■□□□□ 0.95
BRAF-201ENST00000288602 HOXC10Q9NYD6 342 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 FBXL5Q9UKA1 691 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 SNCAIPQ9Y6H5 919 aa21.01■□□□□ 0.95
BRAF-201ENST00000288602 EMSYQ7Z589 1322 aa21■□□□□ 0.95
BRAF-201ENST00000288602 SP2Q02086 613 aa21■□□□□ 0.95
BRAF-201ENST00000288602 PPP3CAQ08209 521 aa21■□□□□ 0.95
BRAF-201ENST00000288602 ZNF746Q6NUN9 644 aaPredicted RBP21■□□□□ 0.95
BRAF-201ENST00000288602 ALKBH5Q6P6C2 394 aaKnown RBP21■□□□□ 0.95
BRAF-201ENST00000288602 CCDC60Q8IWA6 550 aaPredicted RBP21■□□□□ 0.95
BRAF-201ENST00000288602 ZHX1Q9UKY1 873 aaPredicted RBP21■□□□□ 0.95
BRAF-201ENST00000288602 WDR81Q562E7 1941 aa21■□□□□ 0.95
BRAF-201ENST00000288602 F8VZ95 297 aa21■□□□□ 0.95
BRAF-201ENST00000288602 GCLMP48507 274 aa21■□□□□ 0.95
BRAF-201ENST00000288602 TUBB4BP68371 445 aa21■□□□□ 0.95
BRAF-201ENST00000288602 PPP2R5AQ15172 486 aa21■□□□□ 0.95
BRAF-201ENST00000288602 PHLDB3Q6NSJ2 640 aa21■□□□□ 0.95
BRAF-201ENST00000288602 TXLNBQ8N3L3 684 aa21■□□□□ 0.95
BRAF-201ENST00000288602 PLEKHO2Q8TD55 490 aa21■□□□□ 0.95
BRAF-201ENST00000288602 JPH1Q9HDC5 661 aaPredicted RBP21■□□□□ 0.95
BRAF-201ENST00000288602 HYOU1Q9Y4L1 999 aa21■□□□□ 0.95
BRAF-201ENST00000288602 BZW2Q9Y6E2 419 aaKnown RBP21■□□□□ 0.95
BRAF-201ENST00000288602 ANKRD63C9JTQ0 380 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 KRT13P13646 458 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 PRKCIP41743 596 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 NPTX2P47972 431 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 GPR88Q9GZN0 384 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 ANKEF1Q9NU02 776 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 MAPTP10636 758 aaKnown RBP20.99■□□□□ 0.95
BRAF-201ENST00000288602 STAT1P42224 750 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 VAMP7P51809 220 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 NCKAP1LP55160 1127 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 NOL9Q5SY16 702 aaKnown RBP20.99■□□□□ 0.95
BRAF-201ENST00000288602 XRRA1Q6P2D8 792 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 SAAL1Q96ER3 474 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 SLC9A2Q9UBY0 812 aa20.99■□□□□ 0.95
BRAF-201ENST00000288602 TMCO5BA8MYB1 307 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 DDX3XO00571 662 aaKnown RBP eCLIP20.98■□□□□ 0.95
BRAF-201ENST00000288602 ATP2A1O14983 1001 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 SOX5P35711 763 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 XXYLT1Q8NBI6 393 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 APEX2Q9UBZ4 518 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 SEPT9Q9UHD8 586 aaPredicted RBP20.98■□□□□ 0.95
BRAF-201ENST00000288602 PPP2R3BQ9Y5P8 575 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 PCNTO95613 3336 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 STBD1O95210 358 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 ADSSP30520 456 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 ACTR2P61160 394 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 DMTNQ08495 405 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 C1orf220Q5T0J3 134 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 ANKRD35Q8N283 1001 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 TMEM161BQ8NDZ6 487 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 LMO3Q8TAP4 145 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 ZNF526Q8TF50 670 aaPredicted RBP20.98■□□□□ 0.95
BRAF-201ENST00000288602 U2AF1L4Q8WU68 220 aaKnown RBP20.98■□□□□ 0.95
BRAF-201ENST00000288602 STK33Q9BYT3 514 aa20.98■□□□□ 0.95
BRAF-201ENST00000288602 PFASO15067 1338 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 DENND3A2RUS2 1198 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 GRID2IPA4D2P6 1211 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 MAFGO15525 162 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 ADRB2P07550 413 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 NOP2P46087 812 aaKnown RBP20.97■□□□□ 0.95
BRAF-201ENST00000288602 ALCAMQ13740 583 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 INTS8Q75QN2 995 aaKnown RBP20.97■□□□□ 0.95
BRAF-201ENST00000288602 CYFIP1Q7L576 1253 aa20.97■□□□□ 0.95
BRAF-201ENST00000288602 GLYCTKQ8IVS8 523 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms