RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 TBKBP1A7MCY6 615 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 LPXNO60711 386 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 CSPG5O95196 566 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 FGFR1P11362 822 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 PRPHP41219 470 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 ATP2C1P98194 919 aaPredicted RBP15.14■□□□□ 0.01
CT55-201ENST00000276241 IL17AQ16552 155 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 ECM1Q16610 540 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 FAM102BQ5T8I3 360 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 DTHD1Q6ZMT9 781 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
CT55-201ENST00000276241 CMTR2Q8IYT2 770 aaKnown RBP15.14■□□□□ 0.01
CT55-201ENST00000276241 CRIPAKQ8N1N5 446 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 IGSF22Q8N9C0 903 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 SAMD11Q96NU1 681 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 IFT122Q9HBG6 1241 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 MRPL42Q9Y6G3 142 aaKnown RBP15.14■□□□□ 0.01
CT55-201ENST00000276241 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
CT55-201ENST00000276241 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 CDC25AP30304 524 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 PHKA2P46019 1235 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 CAPSQ13938 189 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 TFDP1Q14186 410 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 SKIV2LQ15477 1246 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 ZRSR1Q15695 479 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 KRT79Q5XKE5 535 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 INTS4Q96HW7 963 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 MINDY3Q9H8M7 445 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 GPRC5CQ9NQ84 441 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 PRDM6Q9NQX0 595 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 DDX19AQ9NUU7 478 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 DBR1Q9UK59 544 aaKnown RBP15.13■□□□□ 0.01
CT55-201ENST00000276241 KIAA1024Q9UPX6 916 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 KIAA1671Q9BY89 1806 aa15.13■□□□□ 0.01
CT55-201ENST00000276241 COL6A3P12111 3177 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 ASAP2O43150 1006 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 LINC00271P0C7V0 271 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
CT55-201ENST00000276241 SYT1P21579 422 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 GPM6BQ13491 265 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 PDIA5Q14554 519 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 MXD4Q14582 209 aaPredicted RBP15.12■□□□□ 0.01
CT55-201ENST00000276241 SPOUT1Q5T280 376 aaKnown RBP15.12■□□□□ 0.01
CT55-201ENST00000276241 FAM43BQ6ZT52 329 aaPredicted RBP15.12■□□□□ 0.01
CT55-201ENST00000276241 SRGAP1Q7Z6B7 1085 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 ECHDC2Q86YB7 292 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 SNX21Q969T3 373 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 BHMT2Q9H2M3 363 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 ELAC1Q9H777 363 aaKnown RBP15.12■□□□□ 0.01
CT55-201ENST00000276241 DACT1Q9NYF0 836 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 HCSTQ9UBK5 93 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 RWDD3Q9Y3V2 267 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 STK24Q9Y6E0 443 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 EYSQ5T1H1 3165 aa15.12■□□□□ 0.01
CT55-201ENST00000276241 TTC3P53804 2025 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 ERLIN2O94905 339 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
CT55-201ENST00000276241 MUTP22033 750 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 GLRA2P23416 452 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 LONRF3Q496Y0 759 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 PADI6Q6TGC4 694 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 ABI1Q8IZP0 508 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 C11orf84Q9BUA3 381 aaPredicted RBP15.11■□□□□ 0.01
CT55-201ENST00000276241 AGPAT5Q9NUQ2 364 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 CHD7Q9P2D1 2997 aa15.11■□□□□ 0.01
CT55-201ENST00000276241 LRRIQ4A6NIV6 560 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 E9PMD0 336 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 H3BNC9 293 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 INO80B-WBP1J3KQ70 363 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 ARL2P36404 184 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 BMPR1AP36894 532 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 FAM189BP81408 668 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 RESTQ13127 1097 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 SF3A1Q15459 793 aaKnown RBP15.1■□□□□ 0.01
CT55-201ENST00000276241 CLP1Q92989 425 aaKnown RBP15.1■□□□□ 0.01
CT55-201ENST00000276241 CHST12Q9NRB3 414 aa15.1■□□□□ 0.01
CT55-201ENST00000276241 A0A0U1RQF3 1178 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 HOXA2O43364 376 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 ATF7P17544 494 aaPredicted RBP15.09■□□□□ 0.01
CT55-201ENST00000276241 POU3F3P20264 500 aaPredicted RBP15.09■□□□□ 0.01
CT55-201ENST00000276241 PTENP60484 403 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 MBTD1Q05BQ5 628 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 PTPROQ16827 1216 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 CLLU1OSQ5K130 101 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 ARL6IP4Q66PJ3 421 aaKnown RBP15.09■□□□□ 0.01
CT55-201ENST00000276241 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 HELQQ8TDG4 1101 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 LPPQ93052 612 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 CPB2Q96IY4 423 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 PLIN2Q99541 437 aa15.09■□□□□ 0.01
CT55-201ENST00000276241 MMTAG2Q9BU76 263 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms