RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GRIN2DO15399 1336 aa10.75□□□□□ -0.69
SNRNP40-201ENST00000263694 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 K7ENM7 598 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 TREHO43280 583 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 MSCO60682 206 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 SRGAP2CP0DJJ0 459 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 IER5Q5VY09 327 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 NFRKBQ6P4R8 1299 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 EPM2AIP1Q7L775 607 aaPredicted RBP10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 RHPN2Q8IUC4 686 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 MYOCDQ8IZQ8 938 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 LINC01465Q8N7H1 131 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 C7orf31Q8N865 590 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 PCSK9Q8NBP7 692 aaKnown RBP10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 FAM200AQ8TCP9 573 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 EEF2KMTQ96G04 330 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 TIPINQ9BVW5 301 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 FAM49AQ9H0Q0 323 aaPredicted RBP10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 KMT5AQ9NQR1 393 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 OLFML3Q9NRN5 406 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 LARSQ9P2J5 1176 aaKnown RBP10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 SEL1LQ9UBV2 794 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 USP20Q9Y2K6 914 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 ADGRA3Q8IWK6 1321 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 COL1A2P08123 1366 aa10.74□□□□□ -0.69
SNRNP40-201ENST00000263694 C17orf102A2RUQ5 167 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 RRN3P2A6NIE6 340 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 LRRIQ4A6NIV6 560 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 VTNP04004 478 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 ADAM17P78536 824 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 PAK1Q13153 545 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 CAPSQ13938 189 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 NCAPHQ15003 741 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 ANKRD40Q6AI12 368 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 GDF6Q6KF10 455 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 HAUS6Q7Z4H7 955 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 KIAA0319LQ8IZA0 1049 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 GUF1Q8N442 669 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 NRCAMQ92823 1304 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 ZNF333Q96JL9 665 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 IFT74Q96LB3 600 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 KATNAL1Q9BW62 490 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 NAT10Q9H0A0 1025 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DACH1Q9UI36 760 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 AKT3Q9Y243 479 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 KIAA0100Q14667 2235 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 A0A1W2PQ45 241 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 A0A1W2PQY0 241 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TISP43B9A030 160 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 MAGEB2O15479 319 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 CSDE1O75534 798 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 PPP1R37O75864 691 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 CYP2C9P11712 490 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 CCNE1P24864 410 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TIE1P35590 1138 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DNM2P50570 870 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 NCKAP1LP55160 1127 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DMP1Q13316 513 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 STIM1Q13586 685 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TAS1R3Q7RTX0 852 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 ARRDC4Q8NCT1 418 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TMEM161BQ8NDZ6 487 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 ZNF507Q8TCN5 953 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DNAJB3Q8WWF6 145 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 TCP11Q8WWU5 503 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 P2RX5Q93086 422 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DHTKD1Q96HY7 919 aaPredicted RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DUSP9Q99956 384 aaKnown RBP10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 BPIFA3Q9BQP9 254 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 STRA6Q9BX79 667 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 HSD3B7Q9H2F3 369 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 FANCLQ9NW38 375 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 RWDD2AQ9UIY3 292 aa10.73□□□□□ -0.69
SNRNP40-201ENST00000263694 DNAH12Q6ZR08 3092 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 ZMYM2Q9UBW7 1377 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 DENND3A2RUS2 1198 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 MBLAC1A4D2B0 266 aaPredicted RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 BECN2A8MW95 431 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 KBTBD13C9JR72 458 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 PSMA7O14818 248 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 EDN1P05305 212 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 ERCC5P28715 1186 aaPredicted RBP10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 HOXC8P31273 242 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 SMTNP53814 917 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 RTP1P59025 263 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 MYL5Q02045 173 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 ITGA7Q13683 1181 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 COBLL1Q53SF7 1204 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 CENPPQ6IPU0 288 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 TTI2Q6NXR4 508 aa10.72□□□□□ -0.69
SNRNP40-201ENST00000263694 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms