RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ASNSP08243 561 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 PAMP19021 973 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 TAC1P20366 129 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ALS2CLQ60I27 953 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 DHX38Q92620 1227 aaKnown RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 INTS2Q9H0H0 1204 aaKnown RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 LY9Q9HBG7 655 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 RNF14Q9UBS8 474 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 ADCY2Q08462 1091 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 FAM47EQ6ZV65 393 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 TBC1D1Q86TI0 1168 aaPredicted RBP12.93□□□□□ -0.34
COL8A1-201ENST00000261037 TTC25Q96NG3 672 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 VPS11Q9H270 941 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 SMYD3Q9H7B4 428 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 COL15A1P39059 1388 aa12.93□□□□□ -0.34
COL8A1-201ENST00000261037 SNX2O60749 519 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 KCNA1Q09470 495 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 AP1B1Q10567 949 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 MAPK6Q16659 721 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 KRT80Q6KB66 452 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 CRLF3Q8IUI8 442 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 EFHD1Q9BUP0 239 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 MOCS2O96007 188 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 MMEP08473 750 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 PHKA2P46019 1235 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 SNX19Q92543 992 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 ASNSD1Q9NWL6 643 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 SLC13A4Q9UKG4 626 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 H3BRJ5 948 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 ATP8B1O43520 1251 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 HUS1O60921 280 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 GNL1P36915 607 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 ARL4CP56559 192 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 CUL1Q13616 776 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 NFRKBQ6P4R8 1299 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 FBXO38Q6PIJ6 1188 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 TRIM59Q8IWR1 403 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 MMP19Q99542 508 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 IGKV5-2P06315 115 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 TNFAIP2Q03169 654 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 KCNH2Q12809 1159 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 ZNF564Q8TBZ8 553 aaPredicted RBP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 RNF146Q9NTX7 359 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 PPARGC1AQ9UBK2 798 aaKnown RBP12.92□□□□□ -0.34
COL8A1-201ENST00000261037 CEP152O94986 1710 aa12.92□□□□□ -0.34
COL8A1-201ENST00000261037 ZBTB7AO95365 584 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 GPC5P78333 572 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 TXNRD1Q16881 649 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 C1orf228Q6PIY5 440 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 ANGPTL2Q9UKU9 493 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 CACNB2Q08289 660 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 GRAMD1BQ3KR37 738 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 DCAF4L1Q3SXM0 396 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 SMIM5Q71RC9 77 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 XXYLT1Q8NBI6 393 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 ABTB1Q969K4 478 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 CD209Q9NNX6 404 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 VAMP7P51809 220 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 CAPRIN1Q14444 709 aaKnown RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 MXD4Q14582 209 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 UTYO14607 1347 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 RASA4BC9J798 803 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 MAPK13O15264 365 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 CYP27B1O15528 508 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 RASA4O43374 803 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 GNA15P30679 374 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 TSPY1Q01534 308 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 KIAA1755Q5JYT7 1200 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 RCSD1Q6JBY9 416 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 ELMOD1Q8N336 334 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 OTUD5Q96G74 571 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 PITPNM3Q9BZ71 974 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 FAM217BQ9NTX9 383 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 HDAC6Q9UBN7 1215 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 SUGT1Q9Y2Z0 365 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 PDCLQ13371 301 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 GRM4Q14833 912 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 HIBCHQ6NVY1 386 aaPredicted RBP12.91□□□□□ -0.34
COL8A1-201ENST00000261037 SPATA33Q96N06 139 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 DRC3Q9H069 523 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 THEGQ9P2T0 379 aa12.91□□□□□ -0.34
COL8A1-201ENST00000261037 TDP2O95551 362 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 ARHGDIAP52565 204 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 BZW1Q7L1Q6 419 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 BEST2Q8NFU1 509 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms