RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TAB3Q8N5C8 712 aaPredicted RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ATP11CQ8NB49 1132 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 RNF139Q8WU17 664 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 ELAC2Q9BQ52 826 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DHX36Q9H2U1 1008 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 EMILIN3Q9NT22 766 aa5.12□□□□□ -1.59
RC3H1-201ENST00000258349 DBNLQ9UJU6 430 aaKnown RBP5.12□□□□□ -1.59
RC3H1-201ENST00000258349 KDM1AO60341 852 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 APOA1P02647 267 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 NR3C1P04150 777 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GPS1Q13098 491 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 RBBP7Q16576 425 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 MCUQ8NE86 351 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 SNX19Q92543 992 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TRIM62Q9BVG3 475 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ZWILCHQ9H900 591 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ATP6V0A4Q9HBG4 840 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KIAA1586Q9HCI6 787 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ASNSD1Q9NWL6 643 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 A1BGP04217 495 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 IL10P22301 178 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 SERPINB4P48594 390 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 HSPA2P54652 639 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GPC5P78333 572 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 CCNA1P78396 465 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 LRIG3Q6UXM1 1119 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KCTD1Q719H9 257 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KIRREL3Q8IZU9 778 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 MTRQ99707 1265 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 LRRC4Q9HBW1 653 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ANAPC7Q9UJX3 599 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 FIS1Q9Y3D6 152 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 FAM187AA6NFU0 413 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 HMGB3O15347 200 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ESRRBO95718 433 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TBC1D1Q86TI0 1168 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ANKRD13CQ8N6S4 541 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF555Q8NEP9 628 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 HINFPQ9BQA5 517 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 MSTO1Q9BUK6 570 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 CCDC159P0C7I6 412 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 SOX5P35711 763 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KCNJ6P48051 423 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GTF2IP78347 998 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ROR1Q01973 937 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 CAPRIN1Q14444 709 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 INPP5AQ14642 412 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 BBS9Q3SYG4 887 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 POTEAQ6S8J7 498 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 IP6K2Q9UHH9 426 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TMEM2Q9UHN6 1383 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GOLGA8TH3BQL2 631 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GOLGA8HP0CJ92 632 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KIF22Q14807 665 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TERB1Q8NA31 727 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PBXIP1Q96AQ6 731 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 OTUB1Q96FW1 271 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 EPAS1Q99814 870 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 BRIP1Q9BX63 1249 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 HPCAL4Q9UM19 191 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TULP4Q9NRJ4 1543 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 AARSP49588 968 aaKnown RBP eCLIP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 HNRNPH2P55795 449 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KIAA1755Q5JYT7 1200 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PARD3BQ8TEW8 1205 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 NAF1Q96HR8 494 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PIK3C2BO00750 1634 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 SORBS3O60504 671 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PDCLQ13371 301 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 MYLK4Q86YV6 388 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 LZICQ8WZA0 190 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PPP1R2P1Q96PQ5 205 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GPBP1L1Q9HC44 474 aaPredicted RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.11□□□□□ -1.598e-7■■□□□ 13.1
RC3H1-201ENST00000258349 MPP6Q9NZW5 540 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 KIF13AQ9H1H9 1805 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 SERPINI2O75830 405 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 CD2BP2O95400 341 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 LDHAP00338 332 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 PHKG2P15735 406 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TNFAIP2Q03169 654 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 GRIN1Q05586 938 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ZNF699Q32M78 642 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ITPRIPL1Q6GPH6 555 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ERICH1Q86X53 443 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 EDC3Q96F86 508 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 TBC1D23Q9NUY8 699 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 ADA2Q9NZK5 511 aa5.11□□□□□ -1.59
RC3H1-201ENST00000258349 WARS2Q9UGM6 360 aaKnown RBP5.11□□□□□ -1.59
RC3H1-201ENST00000258349 EIF3DO15371 548 aaKnown RBP eCLIP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TBC1D4O60343 1298 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PHKA1P46020 1223 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 GFPT1Q06210 699 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 KYAT1Q16773 422 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 SPDYE1Q8NFV5 336 aaPredicted RBP5.1□□□□□ -1.59
RC3H1-201ENST00000258349 TTC17Q96AE7 1141 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 BTBD6Q96KE9 485 aa5.1□□□□□ -1.59
RC3H1-201ENST00000258349 PKD2L2Q9NZM6 624 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 211 ms