RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 LRP3O75074 770 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 CXCL14O95715 111 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 RETP07949 1114 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 EPCAMP16422 314 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 KLRC1P26715 233 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 RBM25P49756 843 aaKnown RBP9.49□□□□□ -0.89
IFT43-201ENST00000238628 ANTXR2P58335 489 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 ACTR2P61160 394 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 UBE2SQ16763 222 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 TSSK4Q6SA08 328 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 SLC24A5Q71RS6 500 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 GPR149Q86SP6 731 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 ZNF654Q8IZM8 581 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
IFT43-201ENST00000238628 SRBD1Q8N5C6 995 aaKnown RBP9.49□□□□□ -0.89
IFT43-201ENST00000238628 FEZF2Q8TBJ5 459 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 RUFY2Q8WXA3 655 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 ADAM2Q99965 735 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 MXRA8Q9BRK3 442 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 SDF4Q9BRK5 362 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 CWH43Q9H720 699 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 CDHR5Q9HBB8 845 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 KCNH7Q9NS40 1196 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 IGSF5Q9NSI5 407 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 ANKFY1Q9P2R3 1169 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 NOC2LQ9Y3T9 749 aaKnown RBP9.49□□□□□ -0.89
IFT43-201ENST00000238628 MYH9P35579 1960 aaKnown RBP9.49□□□□□ -0.89
IFT43-201ENST00000238628 IGF2RP11717 2491 aa9.49□□□□□ -0.89
IFT43-201ENST00000238628 CCDC69A6NI79 296 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 C9IYK1 514 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 GPR182O15218 404 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 DDAH1O94760 285 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 PLEKHA8P1O95397 391 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 PDE4AP27815 886 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 PPM1AP35813 382 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 STARD6P59095 220 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 CSRP2Q16527 193 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 LETM2Q2VYF4 491 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 SOWAHCQ53LP3 525 aaPredicted RBP9.48□□□□□ -0.89
IFT43-201ENST00000238628 CASC1Q6TDU7 716 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 KCNT2Q6UVM3 1135 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 NFXL1Q6ZNB6 911 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 PRR23BQ6ZRT6 265 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 TMTC2Q8N394 836 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 NELL1Q92832 810 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 NXPE3Q969Y0 559 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 ZNF558Q96NG5 402 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 SFXN1Q9H9B4 322 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 ATP6V0A4Q9HBG4 840 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 LY9Q9HBG7 655 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 ASH1LQ9NR48 2969 aaKnown RBP9.48□□□□□ -0.89
IFT43-201ENST00000238628 SPG21Q9NZD8 308 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 ST3GAL5Q9UNP4 418 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 TAF6LQ9Y6J9 622 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 NFASCO94856 1347 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 FRYQ5TBA9 3013 aa9.48□□□□□ -0.89
IFT43-201ENST00000238628 hCG_1642624A0A1W2PR95 340 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 KANSL1LA0AUZ9 987 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 FAM170BA6NMN3 283 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 HBP1O60381 514 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 FOXD2O60548 495 aaPredicted RBP9.47□□□□□ -0.89
IFT43-201ENST00000238628 ATG7O95352 703 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 RXRAP19793 462 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 PBX3P40426 434 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 SLC26A2P50443 739 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 UBXN2BQ14CS0 331 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 MB21D2Q8IYB1 491 aaPredicted RBP9.47□□□□□ -0.89
IFT43-201ENST00000238628 KIAA0319LQ8IZA0 1049 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
IFT43-201ENST00000238628 TMEM40Q8WWA1 233 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 ELAC1Q9H777 363 aaKnown RBP9.47□□□□□ -0.89
IFT43-201ENST00000238628 TMEM161AQ9NX61 479 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 RALGAPA1Q6GYQ0 2036 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 UNC79Q9P2D8 2635 aa9.47□□□□□ -0.89
IFT43-201ENST00000238628 MIA3Q5JRA6 1907 aa9.46□□□□□ -0.89
IFT43-201ENST00000238628 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 EIF4E1BA6NMX2 242 aaKnown RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 CYSRT1A8MQ03 144 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 BACH1O14867 736 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 PRC1O43663 620 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 N4BP1O75113 896 aaKnown RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 CALM1P0DP23 149 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 CALM2P0DP24 149 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 CALM3P0DP25 149 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 FGFR1P11362 822 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 NCLP19338 710 aaKnown RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 CHMLP26374 656 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 MAGEA9P43362 315 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 CRYBB1P53674 252 aaPredicted RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 FAM189BP81408 668 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 FOXC1Q12948 553 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 AASDHQ4L235 1098 aaPredicted RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 ZNF484Q5JVG2 852 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 TTC22Q5TAA0 569 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 FAM160B1Q5W0V3 765 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 LRRC55Q6ZSA7 311 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 SLC22A17Q8WUG5 538 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 ZCCHC14Q8WYQ9 949 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms