RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MYH3P11055 1940 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 GBP1P32455 592 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 PMS2P54278 862 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 RNASELQ05823 741 aaKnown RBP15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 PLS1Q14651 629 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 MUM1Q2TAK8 710 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 AGBL2Q5U5Z8 902 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 AIPL1Q9NZN9 384 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 USH1CQ9Y6N9 552 aa15.27■□□□□ 0.04
PCDHB3-201ENST00000231130 SLIT2O94813 1529 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 MAP3K13O43283 966 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 BAG3O95817 575 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 AFPP02771 609 aaKnown RBP15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 PON1P27169 355 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 DBN1Q16643 649 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 KIAA0825Q8IV33 1275 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 PROM2Q8N271 834 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 SLC35G2Q8TBE7 412 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 NEK9Q8TD19 979 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 C18orf8Q96DM3 657 aa15.27■□□□□ 0.03
PCDHB3-201ENST00000231130 CNGA1P29973 690 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 KCNJ1P48048 391 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 PSMC6P62333 389 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 CCDC6Q16204 474 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 ZCWPW2Q504Y3 356 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 RASIP1Q5U651 963 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 NUGGCQ68CJ6 796 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 KCTD1Q719H9 257 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 HOOK3Q86VS8 718 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 LRRC57Q8N9N7 239 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 PNMA3Q9UL41 463 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 COL18A1P39060 1754 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 RSPH10B2B2RC85 870 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 GCNT3O95395 438 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 ACSL3O95573 720 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 RSPH10BP0C881 870 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 MYBP10242 640 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 RIPK1Q13546 671 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 SFR1Q86XK3 245 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 FAM129AQ9BZQ8 928 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 FGFR1OP2Q9NVK5 253 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 TBK1Q9UHD2 729 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 MYH1P12882 1939 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 MYH4Q9Y623 1939 aa15.26■□□□□ 0.03
PCDHB3-201ENST00000231130 CCDC188H7C350 402 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 DDX3XO00571 662 aaKnown RBP eCLIP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 NCALDP61601 193 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 CTNNBL1Q8WYA6 563 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 RNF25Q96BH1 459 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 FGD4Q96M96 766 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 ETNK1Q9HBU6 452 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 AKAP3O75969 853 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 CREB1P16220 341 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 SNAP25P60880 206 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 LONRF1Q17RB8 773 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 EMC10Q5UCC4 262 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 MYLK4Q86YV6 388 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 HAS1Q92839 578 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 LRRC27Q9C0I9 530 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 VCXQ9H320 206 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 C5orf60A6NFR6 353 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 CREB3O43889 395 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 RFC4P35249 363 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 GCLCP48506 637 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 VPS41P49754 854 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 KLC1Q07866 573 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 ZNF746Q6NUN9 644 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 GALNT15Q8N3T1 639 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 RBM41Q96IZ5 413 aaKnown RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 SPZ1Q9BXG8 430 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 ADAM22Q9P0K1 906 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 ZNF652Q9Y2D9 606 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 COL4A1P02462 1669 aa15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 PARP4Q9UKK3 1724 aaKnown RBP15.25■□□□□ 0.03
PCDHB3-201ENST00000231130 A6NHS1 94 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 STAT1P42224 750 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 BTDP43251 543 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 FXR2P51116 673 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 TSNAXIP1Q2TAA8 658 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 ANO7Q6IWH7 933 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 RAB17Q9H0T7 212 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 CNOT10Q9H9A5 744 aaKnown RBP15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 TAS2R14Q9NYV8 317 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 IGSF9BQ9UPX0 1349 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 SRRM3A6NNA2 597 aaPredicted RBP15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 GSTA1P08263 222 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 ALDH3A1P30838 453 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 SEPT14Q6ZU15 432 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 NUP98P52948 1817 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 TCP11X1B4DZS4 312 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 EDIL3O43854 480 aa15.24■□□□□ 0.03
PCDHB3-201ENST00000231130 PPFIA2O75334 1257 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms