RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Exoc4O35382 975 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Tut1Q8R3F9 869 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Cep152A2AUM9 1736 aaKnown RBP19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Arap1Q4LDD4 1452 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Bbs1Q3V3N7 593 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Armc12Q80X86 340 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Lrpap1P55302 360 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Oxr1Q4KMM3 866 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Pla2g4cQ64GA5 597 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Mpp3O88910 568 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ccnd1P25322 295 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Ushbp1Q8R370 680 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Wdr12Q9JJA4 423 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Gm5580A0A0N4SVP8 411 aa19.46■□□□□ 0.71
Trim71-201ENSMUST00000111816 Tada2bD3Z4Z0 420 aaKnown RBP19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 RnaselQ05921 735 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Olfml2bQ3V1G4 746 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Itga6Q61739 1091 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Abraxas1Q8BPZ8 407 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Vps50Q8CI71 964 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 OoepQ9CWE6 164 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Scgb2b11A0A087WR49 112 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 R3hdm1E9Q9Q2 1135 aaKnown RBP19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Heatr9Q5QNV8 569 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Tas2r124Q7M718 309 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Nlrp4bQ8C6J9 863 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 AacsQ9D2R0 672 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Gap43P06837 227 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Fam83gQ5SWY7 812 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Slc13a5Q67BT3 572 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Aggf1Q7TN31 711 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Znf618Q80YY7 953 aaKnown RBP19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Gimap5Q8BWF2 308 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 GmipQ6PGG2 971 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pde10aQ8CA95 790 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Kcnj14Q8JZN3 434 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Creb3l3Q91XE9 479 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Eya3P97480 510 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Mrpl47Q8K2Y7 252 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Lrrc17Q9CXD9 443 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Snf8Q9CZ28 258 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Krt16Q9Z2K1 469 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Cep44Q5HZK1 386 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Q922C1 641 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Teddm1aQ810U2 305 aa19.45■□□□□ 0.7
Trim71-201ENSMUST00000111816 Gm17333C6EQI3 125 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Copb2O55029 905 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pou5f1P20263 352 aaKnown RBP19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Tlr7P58681 1050 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 PhkbQ7TSH2 1085 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Idh3bQ91VA7 384 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Dpp7Q9ET22 506 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Habp4Q9JKS5 411 aaKnown RBP19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 4930444G20RikD3Z741 495 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Ccdc149F6V035 524 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pcdha4O88689 947 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rprd2Q6NXI6 1469 aaKnown RBP19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Gm5814J3QP80 125 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Klrb1fQ8VD98 217 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Retreg1dQ8VE91 480 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Scgb2b18A0A087WPA9 112 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 GclcP97494 637 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pomgnt2Q8BW41 605 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Dync1li1Q8R1Q8 523 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Atg16l2Q6KAU8 623 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pole2O54956 527 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Cyfip2Q5SQX6 1253 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 H6pdQ8CFX1 789 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rgs10Q9CQE5 181 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Pla2g4aP47713 748 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Igflr1Q3U4N7 345 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 RimklbQ80WS1 387 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Teddm1bQ8CC62 306 aa19.44■□□□□ 0.7
Trim71-201ENSMUST00000111816 Akap10O88845 662 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Atp1a3Q6PIC6 1013 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Kirrel3Q8BR86 778 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Snip1Q8BIZ6 383 aaKnown RBP19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Trim33Q99PP7 1142 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Eif2ak4Q9QZ05 1648 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Mlh3A0A1Y7VMP7 1443 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Nutm2Q3V0C3 733 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Prpf38aQ4FK66 312 aaKnown RBP19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rbm46P86049 533 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 SpdyaQ5IBH7 310 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Cog5Q8C0L8 829 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 PtsQ9R1Z7 144 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 MntO08789 591 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Polr1bP70700 1135 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Ccdc51Q3URS9 406 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Slc20a2Q80UP8 656 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 TufmQ8BFR5 452 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rprd1bQ9CSU0 326 aaKnown RBP19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rpap3Q9D706 660 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Lrriq1Q0P5X1 1673 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Zfp277E9Q6D6 583 aaKnown RBP19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Irf5P56477 497 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Btbd6Q8K2J9 488 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Unc45aQ99KD5 944 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Rnf103Q9R1W3 683 aa19.43■□□□□ 0.7
Trim71-201ENSMUST00000111816 Sult6b1P0CC03 303 aa19.43■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms