RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Usp20Q8C6M1 916 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Rell1Q8K2J7 272 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Atp2a1Q8R429 994 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ccdc65Q8VHI7 493 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Coa7Q921H9 231 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Fam111aQ9D2L9 613 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Cfap53Q9D439 514 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ccdc91Q9D8L5 442 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 XdhQ00519 1335 aa17.41■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ifi207E9Q3L4 978 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Samd15F6XZJ7 620 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Nrg3O35181 713 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Gjc1P28229 396 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Epha3P29319 983 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Abi2P62484 446 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Swap70Q6A028 585 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Mxd3Q80US8 206 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Btbd9Q8C726 612 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Nemp2Q8CB65 421 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Trpm8Q8R4D5 1104 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Serpina9Q9D7D2 418 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Extl2Q9ES89 330 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 PlekQ9JHK5 350 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Hyou1Q9JKR6 999 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Net1Q9Z206 595 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Lrrc74aA0A1Y7VMD6 494 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Fbf1A2A870 1173 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Zfp266E9Q2S7 604 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Zc3h7bF8VPP8 982 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Vmn2r77L7N2B7 854 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Il13ra2O88786 383 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Slc3a2P10852 526 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Tmod1P49813 359 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Hoxc13P50207 328 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Fam207aP58468 219 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Siah1bQ06985 282 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ttc39dQ0VF76 604 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Wdr70Q3TWF6 657 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Kiaa0319Q5SZV5 1081 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Map3k12Q60700 888 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 AlcamQ61490 583 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Fam196bQ6GQV1 535 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Fsd1lQ8BYN5 507 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Dnm1lQ8K1M6 742 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 ItpkaQ8R071 459 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Pagr1aQ99L02 253 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Q9D5Q8 446 aa17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Ddx20Q9JJY4 825 aaKnown RBP17.4■□□□□ 0.38
Ttc39b-202ENSMUST00000048274 Astn1Q61137 1302 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Myh10Q61879 1976 aaKnown RBP17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Gm45261A0A1B0GSP6 197 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Apol8A2VDH7 339 aaKnown RBP17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Mmrn1B2RPV6 1210 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Pex5O09012 639 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Ces1cP23953 554 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Akr1b8P45377 316 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 SpertQ32MG2 446 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Lrrc4cQ8C031 640 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 PaoxQ8C0L6 504 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Apol9bQ8C7I4 310 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Rtp1Q8C8C1 263 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Apol9aQ8VDU3 310 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Vps36Q91XD6 386 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Pcdha5Q91Y15 934 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Ranbp17Q99NF8 1088 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Mettl16Q9CQG2 553 aaKnown RBP17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Dph5Q9CWQ0 281 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Grk1Q9WVL4 564 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Psme4Q5SSW2 1843 aa17.39■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Col4a5Q63ZW6 1691 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Patl2A2ARM1 529 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 CraddO88843 199 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Tatdn3Q3U1C6 294 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Q3UTZ3 580 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Peg10Q7TN75 958 aaKnown RBP17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 C2cd2lQ80X80 706 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Cyp26b1Q811W2 512 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Iffo1Q8BXL9 562 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Ago4Q8CJF8 861 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Pkn3Q8K045 878 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Enox2Q8R0Z2 598 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Slc12a8Q8VI23 705 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Satl1Q9D5N8 744 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 IkbipQ9DBZ1 373 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Mtmr2Q9Z2D1 643 aa17.38■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Klhdc7aA2APT9 773 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Flvcr1B2RXV4 560 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Flot1O08917 428 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Casq2O09161 415 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Exoc4O35382 975 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Stmn4P63042 189 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Frg1P97376 258 aaKnown RBP17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Kctd16Q5DTY9 427 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Ctc1Q5SUQ9 1212 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Reep2Q8VCD6 254 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 CactinQ9CS00 772 aaKnown RBP17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Gtf2h1Q9DBA9 547 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Cabp5Q9JLK3 173 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Entpd5Q9WUZ9 427 aa17.37■□□□□ 0.37
Ttc39b-202ENSMUST00000048274 Cyp2ab1S4R196 498 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 53.2 ms