RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Atp2b4Q6Q477 1205 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ccdc25Q78PG9 208 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Btbd9Q8C726 612 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Txnrd3Q99MD6 652 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Q9D5Q8 446 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Scgb2b20Q9JI02 112 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Usp21Q9QZL6 566 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ifi202Q9R002 445 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Hebp1Q9R257 190 aa20.57■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm382B1AXN3 1250 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Sema4dO09126 861 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Rad51bO35719 350 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Mmp14P53690 582 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Xxylt1Q3U4G3 392 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ints2Q80UK8 1198 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 C2cd2lQ80X80 706 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Epn2Q8CHU3 595 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 OtoaQ8K561 1137 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 PhykplQ8R1K4 467 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 WaslQ91YD9 501 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 SncbQ91ZZ3 133 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Q9CYI0 393 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Dgcr8Q9EQM6 773 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm3095E9Q058 166 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Serpina1aP07758 413 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Serpina1cQ00896 412 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Serpina1dQ00897 413 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Vmn1r209Q5NC97 312 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Igf2bp2Q5SF07 592 aaKnown RBP20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 NrcamQ810U4 1256 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Rint1Q8BZ36 792 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Pagr1aQ99L02 253 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Taf1dQ9D4V4 322 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Hyou1Q9JKR6 999 aaKnown RBP20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Tlr2Q9QUN7 784 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Azi2Q9QYP6 405 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Krt71Q9R0H5 524 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Lypla2Q9WTL7 231 aa20.56■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm28360A0A087WR25 190 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Parp2O88554 559 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 CraddO88843 199 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Slc1a1P51906 523 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Traf5P70191 558 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Agbl1Q09M05 972 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Tatdn3Q3U1C6 294 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm10488Q4KL05 212 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ttf2Q5NC05 1138 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Fbxo11Q7TPD1 930 aaKnown RBP20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Nop53Q8BK35 484 aaKnown RBP20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Fsd1lQ8BYN5 507 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ppp1r11Q8K1L5 131 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Havcr2Q8VIM0 281 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 F11Q91Y47 624 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Cabp5Q9JLK3 173 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm45261A0A1B0GSP6 197 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Patl2A2ARM1 529 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 DtnbO70585 659 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ubxn2bQ0KL01 331 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Dok7Q18PE0 504 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Taok1Q5F2E8 1001 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ptger2Q62053 362 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Pdzph1Q8BGR1 1238 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Depdc1aQ8CIG0 804 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Snx24Q9CRB0 169 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Arhgef7Q9ES28 862 aa20.55■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Col2a1P28481 1487 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm5936A2BG95 728 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm5640A3KG49 728 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Copb2O55029 905 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Epha3P29319 983 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Pcsk7Q61139 770 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Adgrg6Q6F3F9 1165 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 TwistnbQ78WZ7 330 aaKnown RBP20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Bicd1Q8BR07 835 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Vps36Q91XD6 386 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Mrps5Q99N87 432 aaKnown RBP20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Stk11Q9WTK7 436 aa20.54■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ace3D0G895 737 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Xrcc6P23475 608 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Mtus1Q5HZI1 1210 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ctnna2Q61301 953 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Depdc1bQ8BH88 529 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Scfd1Q8BRF7 639 aaKnown RBP20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Dnajc28Q8VCE1 385 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Grhl1Q921D9 618 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ccdc182Q9D9C6 152 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Orc3Q9JK30 715 aaKnown RBP20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gdf11Q9Z1W4 405 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 SynrgQ5SV85 1306 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Nmt1O70310 496 aaKnown RBP20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ces1cP23953 554 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Eps15P42567 897 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ptprn2P80560 1001 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Fbxl5Q8C2S5 690 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Apol9bQ8C7I4 310 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Enox2Q8R0Z2 598 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Apol9aQ8VDU3 310 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Oxnad1Q8VE38 311 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Atp6v1e2Q9D593 226 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gtf2h1Q9DBA9 547 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms