RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeastyeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPN1YPR133C UBP14P38237 781 aaKnown RBP6.61□□□□□ -1.35
SPN1YPR133C RGA1P39083 1007 aa6.61□□□□□ -1.35
SPN1YPR133C VHR2P40041 505 aa6.61□□□□□ -1.35
SPN1YPR133C REF2P42073 533 aaPredicted RBP6.61□□□□□ -1.35
SPN1YPR133C YLR326WQ06170 240 aaKnown RBP6.6□□□□□ -1.35
SPN1YPR133C TYS1P36421 394 aaKnown RBP6.59□□□□□ -1.35
SPN1YPR133C SLI15P38283 698 aa6.59□□□□□ -1.35
SPN1YPR133C NMA111P53920 997 aa6.59□□□□□ -1.35
SPN1YPR133C DPL1Q05567 589 aa6.59□□□□□ -1.35
SPN1YPR133C SRC1Q03707 834 aa6.58□□□□□ -1.36
SPN1YPR133C RAD54P32863 898 aa6.55□□□□□ -1.36
SPN1YPR133C YDR090CQ03193 310 aa6.55□□□□□ -1.36
SPN1YPR133C MAK21Q12176 1025 aaKnown RBP6.55□□□□□ -1.36
SPN1YPR133C PDR5P33302 1511 aaKnown RBP6.55□□□□□ -1.36
SPN1YPR133C PCS60P38137 543 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
SPN1YPR133C KIC1P38692 1080 aa6.53□□□□□ -1.36
SPN1YPR133C APP1P53933 587 aa6.53□□□□□ -1.36
SPN1YPR133C PBS2P08018 668 aa6.52□□□□□ -1.37
SPN1YPR133C COX6P00427 148 aa6.51□□□□□ -1.37
SPN1YPR133C ISU2Q12056 156 aa6.51□□□□□ -1.37
SPN1YPR133C YRF1-2P40105 1681 aa6.51□□□□□ -1.37
SPN1YPR133C BCK1Q01389 1478 aa6.5□□□□□ -1.37
SPN1YPR133C BUD21Q08492 214 aaPredicted RBP6.5□□□□□ -1.37
SPN1YPR133C RAM1P22007 431 aa6.49□□□□□ -1.37
SPN1YPR133C YPR015CQ12531 247 aa6.49□□□□□ -1.37
SPN1YPR133C GCN2P15442 1659 aa6.49□□□□□ -1.37
SPN1YPR133C SPB4P25808 606 aaPredicted RBP6.48□□□□□ -1.37
SPN1YPR133C DSF2P38213 736 aa6.47□□□□□ -1.37
SPN1YPR133C CFT1Q06632 1357 aaKnown RBP6.46□□□□□ -1.37
SPN1YPR133C RPP1BP10622 106 aaKnown RBP6.46□□□□□ -1.38
SPN1YPR133C CDC73Q06697 393 aa6.46□□□□□ -1.38
SPN1YPR133C NUP192P47054 1683 aa6.45□□□□□ -1.38
SPN1YPR133C PDR11P40550 1411 aa6.45□□□□□ -1.38
SPN1YPR133C YMR074CQ04773 145 aa6.45□□□□□ -1.38
SPN1YPR133C KRE5P22023 1365 aa6.44□□□□□ -1.38
SPN1YPR133C RAS1P01119 309 aa6.44□□□□□ -1.38
SPN1YPR133C GYP1Q08484 637 aa6.44□□□□□ -1.38
SPN1YPR133C MAM3Q12296 706 aa6.44□□□□□ -1.38
SPN1YPR133C RRP5Q05022 1729 aaKnown RBP6.44□□□□□ -1.38
SPN1YPR133C AMS1P22855 1083 aa6.42□□□□□ -1.38
SPN1YPR133C ORC6P38826 435 aa6.42□□□□□ -1.38
SPN1YPR133C SAS4Q04003 481 aa6.41□□□□□ -1.38
SPN1YPR133C LEO1P38439 464 aa6.4□□□□□ -1.38
SPN1YPR133C YNR029CP53729 429 aaKnown RBP6.4□□□□□ -1.38
SPN1YPR133C RIA1P53893 1110 aa6.4□□□□□ -1.38
SPN1YPR133C GAP1P19145 602 aaPredicted RBP6.39□□□□□ -1.39
SPN1YPR133C IES2P40154 320 aa6.39□□□□□ -1.39
SPN1YPR133C CSC1Q06538 782 aa6.39□□□□□ -1.39
SPN1YPR133C TRK1P12685 1235 aa6.38□□□□□ -1.39
SPN1YPR133C ENT1Q12518 454 aa6.38□□□□□ -1.39
SPN1YPR133C PDR1P12383 1068 aa6.37□□□□□ -1.39
SPN1YPR133C MRX12P47084 519 aa6.37□□□□□ -1.39
SPN1YPR133C PEX21P50091 288 aa6.37□□□□□ -1.39
SPN1YPR133C TFB4Q12004 338 aa6.37□□□□□ -1.39
SPN1YPR133C ENV9Q08651 330 aa6.36□□□□□ -1.39
SPN1YPR133C TY4B-HP0C2J7 1802 aa6.36□□□□□ -1.39
SPN1YPR133C TY4B-JP47024 1803 aa6.36□□□□□ -1.39
SPN1YPR133C TY3B-IQ7LHG5 1498 aaKnown RBP6.35□□□□□ -1.39
SPN1YPR133C NUP42P49686 430 aaKnown RBP6.35□□□□□ -1.39
SPN1YPR133C YEL077CQ3E7X8 1277 aa6.35□□□□□ -1.39
SPN1YPR133C SDH2P21801 266 aa6.34□□□□□ -1.39
SPN1YPR133C PSE1P32337 1089 aaKnown RBP6.34□□□□□ -1.39
SPN1YPR133C MVP1P40959 511 aaKnown RBP6.34□□□□□ -1.39
SPN1YPR133C IMH1Q06704 911 aaKnown RBP6.34□□□□□ -1.39
SPN1YPR133C URB1P34241 1764 aaKnown RBP6.34□□□□□ -1.4
SPN1YPR133C RGR1P19263 1082 aa6.32□□□□□ -1.4
SPN1YPR133C MRF1P30775 413 aaPredicted RBP6.32□□□□□ -1.4
SPN1YPR133C YRR1Q12172 810 aa6.32□□□□□ -1.4
SPN1YPR133C FKS3Q04952 1785 aa6.31□□□□□ -1.4
SPN1YPR133C DIT2P21595 489 aa6.31□□□□□ -1.4
SPN1YPR133C TUM1Q08686 304 aaKnown RBP6.31□□□□□ -1.4
SPN1YPR133C LEU3P08638 886 aa6.3□□□□□ -1.4
SPN1YPR133C YPR109WQ06104 294 aa6.28□□□□□ -1.4
SPN1YPR133C CLB5P30283 435 aa6.27□□□□□ -1.41
SPN1YPR133C YNR021WP53723 404 aaKnown RBP6.27□□□□□ -1.41
SPN1YPR133C PRT1P06103 763 aaKnown RBP6.26□□□□□ -1.41
SPN1YPR133C CAB1Q04430 367 aa6.26□□□□□ -1.41
SPN1YPR133C BUD20Q08004 166 aaPredicted RBP6.26□□□□□ -1.41
SPN1YPR133C RAD9P14737 1309 aa6.25□□□□□ -1.41
SPN1YPR133C RAV1P47104 1357 aa6.25□□□□□ -1.41
SPN1YPR133C YRF1-3P0CX14 1859 aa6.24□□□□□ -1.41
SPN1YPR133C YRF1-7P0CX15 1859 aa6.24□□□□□ -1.41
SPN1YPR133C YRF1-6P53819 1859 aa6.24□□□□□ -1.41
SPN1YPR133C NUD1P32336 851 aa6.24□□□□□ -1.41
SPN1YPR133C STR2P47164 639 aa6.24□□□□□ -1.41
SPN1YPR133C IKI3Q06706 1349 aaKnown RBP6.24□□□□□ -1.41
SPN1YPR133C UBP1P25037 809 aa6.23□□□□□ -1.41
SPN1YPR133C ALD4P46367 519 aaKnown RBP6.23□□□□□ -1.41
SPN1YPR133C SSA1P10591 642 aaKnown RBP6.22□□□□□ -1.41
SPN1YPR133C GLC3P32775 704 aa6.22□□□□□ -1.41
SPN1YPR133C NPL4P33755 580 aa6.22□□□□□ -1.41
SPN1YPR133C YBL086CP38177 466 aa6.22□□□□□ -1.41
SPN1YPR133C TEA1P47988 759 aa6.22□□□□□ -1.41
SPN1YPR133C ATF2P53296 535 aa6.22□□□□□ -1.41
SPN1YPR133C SSM4P40318 1319 aa6.22□□□□□ -1.41
SPN1YPR133C ERG12P07277 443 aa6.21□□□□□ -1.42
SPN1YPR133C PRP45P28004 379 aaPredicted RBP6.21□□□□□ -1.42
SPN1YPR133C ISM1P48526 1002 aa6.21□□□□□ -1.42
SPN1YPR133C RPN11P43588 306 aaKnown RBP6.2□□□□□ -1.42
SPN1YPR133C AIM7Q12156 149 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms