RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	ATG13	Q06628	738 aa		12.43	□□□□□ -0.42
TIF6	YPR016C	SUI2	P20459	304 aa	Known RBP	12.42	□□□□□ -0.42
TIF6	YPR016C	OSM1	P21375	501 aa	Known RBP	12.42	□□□□□ -0.42
TIF6	YPR016C	RTT109	Q07794	436 aa		12.42	□□□□□ -0.42
TIF6	YPR016C	CDC45	Q08032	650 aa		12.42	□□□□□ -0.42
TIF6	YPR016C	YNL050C	P53952	270 aa		12.41	□□□□□ -0.42
TIF6	YPR016C	YKR075C	P36155	307 aa		12.4	□□□□□ -0.42
TIF6	YPR016C	LAM6	Q08001	693 aa		12.4	□□□□□ -0.42
TIF6	YPR016C	YJL181W	P46987	611 aa		12.38	□□□□□ -0.43
TIF6	YPR016C	HEF3	P53978	1044 aa	Known RBP	12.38	□□□□□ -0.43
TIF6	YPR016C	RVB2	Q12464	471 aa	Known RBP	12.38	□□□□□ -0.43
TIF6	YPR016C	BUD31	P25337	157 aa	Predicted RBP	12.37	□□□□□ -0.43
TIF6	YPR016C	KCC4	P25389	1037 aa		12.37	□□□□□ -0.43
TIF6	YPR016C	ZDS1	P50111	915 aa	Known RBP	12.37	□□□□□ -0.43
TIF6	YPR016C	PRP40	P33203	583 aa	Known RBP	12.36	□□□□□ -0.43
TIF6	YPR016C	RRT14	P40470	206 aa		12.36	□□□□□ -0.43
TIF6	YPR016C	YBP2	P53169	641 aa		12.35	□□□□□ -0.43
TIF6	YPR016C	UBP1	P25037	809 aa		12.34	□□□□□ -0.43
TIF6	YPR016C	YBR287W	P38355	427 aa		12.34	□□□□□ -0.43
TIF6	YPR016C	NPR2	P39923	615 aa		12.34	□□□□□ -0.43
TIF6	YPR016C	RIM15	P43565	1770 aa		12.33	□□□□□ -0.44
TIF6	YPR016C	UGA3	P26370	528 aa		12.33	□□□□□ -0.44
TIF6	YPR016C	MAM1	P40065	302 aa		12.33	□□□□□ -0.44
TIF6	YPR016C	ALE1	Q08548	619 aa		12.33	□□□□□ -0.44
TIF6	YPR016C	GYP7	P48365	746 aa		12.32	□□□□□ -0.44
TIF6	YPR016C	NSE3	Q05541	303 aa		12.32	□□□□□ -0.44
TIF6	YPR016C	FUN12	P39730	1002 aa	Known RBP	12.31	□□□□□ -0.44
TIF6	YPR016C	BMS1	Q08965	1183 aa	Known RBP	12.31	□□□□□ -0.44
TIF6	YPR016C	COQ4	O13525	335 aa		12.29	□□□□□ -0.44
TIF6	YPR016C	EDE1	P34216	1381 aa		12.29	□□□□□ -0.44
TIF6	YPR016C	GRX1	P25373	110 aa	Known RBP	12.28	□□□□□ -0.44
TIF6	YPR016C	LYS4	P49367	693 aa	Predicted RBP	12.28	□□□□□ -0.44
TIF6	YPR016C	RMT2	Q03305	412 aa		12.28	□□□□□ -0.44
TIF6	YPR016C	TUM1	Q08686	304 aa	Known RBP	12.28	□□□□□ -0.44
TIF6	YPR016C	YRB30	P53107	440 aa	Predicted RBP	12.26	□□□□□ -0.45
TIF6	YPR016C	PRI1	P10363	409 aa		12.25	□□□□□ -0.45
TIF6	YPR016C	SRT1	Q03175	343 aa		12.25	□□□□□ -0.45
TIF6	YPR016C	MSB4	Q12317	492 aa		12.25	□□□□□ -0.45
TIF6	YPR016C	RAD4	P14736	754 aa		12.24	□□□□□ -0.45
TIF6	YPR016C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	12.24	□□□□□ -0.45	not detected
TIF6	YPR016C	NOP53	Q12080	455 aa	Known RBP	12.24	□□□□□ -0.45
TIF6	YPR016C	LYS2	P07702	1392 aa		12.23	□□□□□ -0.45
TIF6	YPR016C	GRE2	Q12068	342 aa	Known RBP	12.22	□□□□□ -0.45
TIF6	YPR016C	DAL5	P15365	543 aa		12.21	□□□□□ -0.45
TIF6	YPR016C	ZDS2	P54786	942 aa		12.21	□□□□□ -0.45
TIF6	YPR016C	MAK21	Q12176	1025 aa	Known RBP	12.21	□□□□□ -0.45
TIF6	YPR016C	YOL057W	Q08225	711 aa		12.2	□□□□□ -0.46
TIF6	YPR016C	YIL092W	P40497	633 aa		12.19	□□□□□ -0.46
TIF6	YPR016C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	12.18	□□□□□ -0.46	not detected
TIF6	YPR016C	RAD2	P07276	1031 aa		12.17	□□□□□ -0.46
TIF6	YPR016C	YBL086C	P38177	466 aa		12.17	□□□□□ -0.46
TIF6	YPR016C	CTH1	P47976	325 aa		12.17	□□□□□ -0.46
TIF6	YPR016C	VPS64	Q03944	604 aa		12.17	□□□□□ -0.46
TIF6	YPR016C	SSP2	Q08646	371 aa		12.17	□□□□□ -0.46
TIF6	YPR016C	TEA1	P47988	759 aa		12.16	□□□□□ -0.46
TIF6	YPR016C	APL2	P36000	726 aa	Predicted RBP	12.15	□□□□□ -0.46
TIF6	YPR016C	ALD2	P47771	506 aa		12.15	□□□□□ -0.46
TIF6	YPR016C	MDG1	P53885	366 aa		12.15	□□□□□ -0.46
TIF6	YPR016C	BUG1	Q12191	341 aa		12.15	□□□□□ -0.46
TIF6	YPR016C	PHM7	Q12252	991 aa		12.15	□□□□□ -0.46
TIF6	YPR016C	YFR016C	P43597	1233 aa	Known RBP	12.14	□□□□□ -0.47
TIF6	YPR016C	MRP7	P12687	371 aa		12.13	□□□□□ -0.47
TIF6	YPR016C	SER1	P33330	395 aa	Known RBP	12.13	□□□□□ -0.47
TIF6	YPR016C	BDF1	P35817	686 aa		12.13	□□□□□ -0.47
TIF6	YPR016C	YPP1	P46951	817 aa		12.13	□□□□□ -0.47
TIF6	YPR016C	YGR122W	P53272	402 aa		12.13	□□□□□ -0.47
TIF6	YPR016C	NYV1	Q12255	253 aa		12.13	□□□□□ -0.47
TIF6	YPR016C	SSA2	P10592	639 aa	Known RBP	12.12	□□□□□ -0.47
TIF6	YPR016C	RPG1	P38249	964 aa	Known RBP	12.12	□□□□□ -0.47
TIF6	YPR016C	YGL082W	P53155	381 aa		12.12	□□□□□ -0.47
TIF6	YPR016C	YDR306C	Q06640	478 aa		12.12	□□□□□ -0.47
TIF6	YPR016C	NOP8	Q08287	484 aa	Predicted RBP	12.12	□□□□□ -0.47
TIF6	YPR016C	ARG8	P18544	423 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	TFA1	P36100	482 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	UGA2	P38067	497 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	DNM1	P54861	757 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	CSI1	Q04368	295 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	YPR204W	Q08995	1032 aa		12.11	□□□□□ -0.47
TIF6	YPR016C	RAD24	P32641	659 aa		12.1	□□□□□ -0.47
TIF6	YPR016C	NUP133	P36161	1157 aa		12.1	□□□□□ -0.47
TIF6	YPR016C	GTT3	P39996	337 aa		12.1	□□□□□ -0.47
TIF6	YPR016C	SWI1	P09547	1314 aa		12.1	□□□□□ -0.47
TIF6	YPR016C	CST6	P40535	587 aa		12.09	□□□□□ -0.47
TIF6	YPR016C	TRP5	P00931	707 aa	Known RBP	12.08	□□□□□ -0.48
TIF6	YPR016C	DCD1	P06773	312 aa		12.08	□□□□□ -0.48
TIF6	YPR016C	UTP22	P53254	1237 aa	Predicted RBP	12.08	□□□□□ -0.48
TIF6	YPR016C	ALD3	P54114	506 aa		12.08	□□□□□ -0.48
TIF6	YPR016C	SWC3	P31376	625 aa		12.07	□□□□□ -0.48
TIF6	YPR016C	UTP10	P42945	1769 aa	Known RBP	12.07	□□□□□ -0.48
TIF6	YPR016C	POL32	P47110	350 aa		12.06	□□□□□ -0.48
TIF6	YPR016C	CTI6	Q08923	506 aa		12.06	□□□□□ -0.48
TIF6	YPR016C	PKH1	Q03407	766 aa		12.05	□□□□□ -0.48
TIF6	YPR016C	FPR3	P38911	411 aa	Known RBP	12.04	□□□□□ -0.48
TIF6	YPR016C	YJR008W	P47085	338 aa		12.04	□□□□□ -0.48
TIF6	YPR016C	HPC2	Q01448	625 aa		12.04	□□□□□ -0.48
TIF6	YPR016C	PUF6	Q04373	656 aa	Known RBP	12.04	□□□□□ -0.48
TIF6	YPR016C	RPS19A	P07280	144 aa	Known RBP	12.03	□□□□□ -0.48
TIF6	YPR016C	RPS19B	P07281	144 aa	Predicted RBP	12.03	□□□□□ -0.48
TIF6	YPR016C	TOS1	P38288	455 aa		12.03	□□□□□ -0.48
TIF6	YPR016C	YNG2	P38806	282 aa	Known RBP	12.03	□□□□□ -0.48

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms