RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W PDS5Q04264 1277 aa7.1□□□□□ -1.27
PDH1YPR002W IML1P47170 1584 aa7.09□□□□□ -1.27
PDH1YPR002W DRS2P39524 1355 aa7.09□□□□□ -1.28
PDH1YPR002W MLP1Q02455 1875 aaKnown RBP7.08□□□□□ -1.28
PDH1YPR002W GLC3P32775 704 aa7.08□□□□□ -1.28
PDH1YPR002W BMT6Q12291 365 aa7.08□□□□□ -1.28
PDH1YPR002W DNF2Q12675 1612 aa7.07□□□□□ -1.28
PDH1YPR002W TFG1P41895 735 aaPredicted RBP7.07□□□□□ -1.28
PDH1YPR002W PML39Q03760 334 aa7.07□□□□□ -1.28
PDH1YPR002W AIM7Q12156 149 aa7.07□□□□□ -1.28
PDH1YPR002W SAP30P38429 201 aa7.05□□□□□ -1.28
PDH1YPR002W YDL129WQ07555 291 aa7.05□□□□□ -1.28
PDH1YPR002W KIN1P13185 1064 aa7.04□□□□□ -1.28
PDH1YPR002W TAF5P38129 798 aa7.03□□□□□ -1.28
PDH1YPR002W MID1P41821 548 aa7.03□□□□□ -1.28
PDH1YPR002W ATF2P53296 535 aa7.03□□□□□ -1.28
PDH1YPR002W PSE1P32337 1089 aaKnown RBP7.02□□□□□ -1.29
PDH1YPR002W ESL2P36168 1195 aa7.02□□□□□ -1.29
PDH1YPR002W SLI15P38283 698 aa7.02□□□□□ -1.29
PDH1YPR002W KIP3P53086 805 aaKnown RBP7.02□□□□□ -1.29
PDH1YPR002W ORC6P38826 435 aa7.01□□□□□ -1.29
PDH1YPR002W YDR344CQ05510 147 aa7.01□□□□□ -1.29
PDH1YPR002W TRM3Q07527 1436 aa7□□□□□ -1.29
PDH1YPR002W RPP0P05317 312 aaKnown RBP7□□□□□ -1.29
PDH1YPR002W RPP1BP10622 106 aaKnown RBP7□□□□□ -1.29
PDH1YPR002W IOC4Q04213 475 aa6.99□□□□□ -1.29
PDH1YPR002W SNF2P22082 1703 aa6.98□□□□□ -1.29
PDH1YPR002W IME2P32581 645 aa6.97□□□□□ -1.29
PDH1YPR002W VPS27P40343 622 aaKnown RBP6.97□□□□□ -1.29
PDH1YPR002W CDC45Q08032 650 aa6.97□□□□□ -1.29
PDH1YPR002W OPY1P38271 328 aa6.96□□□□□ -1.29
PDH1YPR002W FUN12P39730 1002 aaKnown RBP6.95□□□□□ -1.3
PDH1YPR002W RVB2Q12464 471 aaKnown RBP6.95□□□□□ -1.3
PDH1YPR002W BCK1Q01389 1478 aa6.95□□□□□ -1.3
PDH1YPR002W SPE2P21182 396 aa6.95□□□□□ -1.3
PDH1YPR002W DMA2P53924 522 aa6.95□□□□□ -1.3
PDH1YPR002W CSC1Q06538 782 aa6.95□□□□□ -1.3
PDH1YPR002W RPC31P17890 251 aa6.94□□□□□ -1.3
PDH1YPR002W PEX29Q03370 554 aa6.94□□□□□ -1.3
PDH1YPR002W RGR1P19263 1082 aa6.93□□□□□ -1.3
PDH1YPR002W YAP3P38749 330 aa6.93□□□□□ -1.3
PDH1YPR002W CDC73Q06697 393 aa6.93□□□□□ -1.3
PDH1YPR002W MPC54Q08550 464 aa6.93□□□□□ -1.3
PDH1YPR002W YEF3P16521 1044 aaKnown RBP6.92□□□□□ -1.3
PDH1YPR002W GAP1P19145 602 aaPredicted RBP6.92□□□□□ -1.3
PDH1YPR002W SCT1P32784 759 aa6.92□□□□□ -1.3
PDH1YPR002W MVP1P40959 511 aaKnown RBP6.92□□□□□ -1.3
PDH1YPR002W DNF3Q12674 1656 aa6.92□□□□□ -1.3
PDH1YPR002W CLB5P30283 435 aa6.91□□□□□ -1.3
PDH1YPR002W TEA1P47988 759 aa6.91□□□□□ -1.3
PDH1YPR002W YRB30P53107 440 aaPredicted RBP6.91□□□□□ -1.3
PDH1YPR002W YML133CQ03099 1374 aa6.91□□□□□ -1.3
PDH1YPR002W YLL067CQ07888 1374 aa6.91□□□□□ -1.3
PDH1YPR002W YLL066CQ99208 1374 aa6.91□□□□□ -1.3
PDH1YPR002W PEX21P50091 288 aa6.91□□□□□ -1.3
PDH1YPR002W DPL1Q05567 589 aa6.91□□□□□ -1.3
PDH1YPR002W HAP1P0CE41 1502 aa6.9□□□□□ -1.3
PDH1YPR002W TRK1P12685 1235 aa6.9□□□□□ -1.31
PDH1YPR002W PRE3P38624 215 aa6.9□□□□□ -1.31
PDH1YPR002W YDL144CQ07589 356 aa6.9□□□□□ -1.31
PDH1YPR002W TFB4Q12004 338 aa6.9□□□□□ -1.31
PDH1YPR002W SUI2P20459 304 aaKnown RBP6.89□□□□□ -1.31
PDH1YPR002W ARH1P48360 493 aa6.89□□□□□ -1.31
PDH1YPR002W GUA1P38625 525 aaKnown RBP6.88□□□□□ -1.31
PDH1YPR002W YIR014WP40570 242 aa6.88□□□□□ -1.31
PDH1YPR002W ELP4Q02884 456 aaKnown RBP6.88□□□□□ -1.31
PDH1YPR002W CHL1P22516 861 aaPredicted RBP6.87□□□□□ -1.31
PDH1YPR002W HGH1P48362 394 aaKnown RBP6.87□□□□□ -1.31
PDH1YPR002W RAD9P14737 1309 aa6.87□□□□□ -1.31
PDH1YPR002W TYS1P36421 394 aaKnown RBP6.86□□□□□ -1.31
PDH1YPR002W ALD4P46367 519 aaKnown RBP6.86□□□□□ -1.31
PDH1YPR002W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
PDH1YPR002W YPR109WQ06104 294 aa6.86□□□□□ -1.31
PDH1YPR002W NMA111P53920 997 aa6.86□□□□□ -1.31
PDH1YPR002W HAP5Q02516 242 aa6.86□□□□□ -1.31
PDH1YPR002W TAF8Q03750 510 aa6.86□□□□□ -1.31
PDH1YPR002W IPL1P38991 367 aa6.85□□□□□ -1.31
PDH1YPR002W CHZ1P40019 153 aaPredicted RBP6.85□□□□□ -1.31
PDH1YPR002W RRP46P53256 223 aaPredicted RBP6.85□□□□□ -1.31
PDH1YPR002W TUM1Q08686 304 aaKnown RBP6.85□□□□□ -1.31
PDH1YPR002W ISU2Q12056 156 aa6.85□□□□□ -1.31
PDH1YPR002W BNI1P41832 1953 aa6.84□□□□□ -1.31
PDH1YPR002W CLC1P17891 233 aa6.84□□□□□ -1.31
PDH1YPR002W CSN12P47130 423 aa6.84□□□□□ -1.31
PDH1YPR002W SSA2P10592 639 aaKnown RBP6.83□□□□□ -1.32
PDH1YPR002W FPR3P38911 411 aaKnown RBP6.83□□□□□ -1.32
PDH1YPR002W YFR016CP43597 1233 aaKnown RBP6.83□□□□□ -1.32
PDH1YPR002W MPP10P47083 593 aaKnown RBP6.83□□□□□ -1.32
PDH1YPR002W HPC2Q01448 625 aa6.83□□□□□ -1.32
PDH1YPR002W TY1B-NL2Q99337 1749 aaKnown RBP6.81□□□□□ -1.32
PDH1YPR002W NIS1P53939 407 aa6.81□□□□□ -1.32
PDH1YPR002W YMR196WQ04336 1088 aa6.81□□□□□ -1.32
PDH1YPR002W YRR1Q12172 810 aa6.81□□□□□ -1.32
PDH1YPR002W KRE5P22023 1365 aa6.8□□□□□ -1.32
PDH1YPR002W SPT23P35210 1082 aa6.79□□□□□ -1.32
PDH1YPR002W SNF7P39929 240 aaKnown RBP6.79□□□□□ -1.32
PDH1YPR002W BNI4P53858 892 aa6.79□□□□□ -1.32
PDH1YPR002W USO1P25386 1790 aa6.79□□□□□ -1.32
PDH1YPR002W BRL1P38770 471 aa6.78□□□□□ -1.32
PDH1YPR002W SAP155P43612 1002 aa6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms