RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	HPF1	Q05164	967 aa		7.18	□□□□□ -1.26
RUD3	YOR216C	GLN1	P32288	370 aa	Known RBP	7.17	□□□□□ -1.26
RUD3	YOR216C	VAC17	P25591	423 aa		7.17	□□□□□ -1.26
RUD3	YOR216C	ATF2	P53296	535 aa		7.17	□□□□□ -1.26
RUD3	YOR216C	YBL086C	P38177	466 aa		7.16	□□□□□ -1.26
RUD3	YOR216C	ARG82	P07250	355 aa		7.15	□□□□□ -1.27
RUD3	YOR216C	AAD14	P42884	376 aa		7.15	□□□□□ -1.27
RUD3	YOR216C	YJU3	P28321	313 aa		7.14	□□□□□ -1.27
RUD3	YOR216C	LSC2	P53312	427 aa		7.14	□□□□□ -1.27
RUD3	YOR216C	UBP2	Q01476	1272 aa		7.14	□□□□□ -1.27
RUD3	YOR216C	RSC30	P38781	883 aa		7.11	□□□□□ -1.27
RUD3	YOR216C	YJR098C	P47139	656 aa		7.11	□□□□□ -1.27
RUD3	YOR216C	GLC3	P32775	704 aa		7.1	□□□□□ -1.27
RUD3	YOR216C	YNR021W	P53723	404 aa	Known RBP	7.1	□□□□□ -1.27
RUD3	YOR216C	EMW1	P42842	904 aa	Known RBP	7.09	□□□□□ -1.27
RUD3	YOR216C	ITT1	Q04638	464 aa		7.09	□□□□□ -1.27
RUD3	YOR216C	YPR204W	Q08995	1032 aa		7.09	□□□□□ -1.27
RUD3	YOR216C	KTR1	P27810	393 aa	Known RBP	7.07	□□□□□ -1.28
RUD3	YOR216C	DPH6	Q12429	685 aa		7.07	□□□□□ -1.28
RUD3	YOR216C	TY1A-MR1	Q04215	440 aa		7.06	□□□□□ -1.28
RUD3	YOR216C	ICP55	P40051	511 aa		7.05	□□□□□ -1.28
RUD3	YOR216C	ROG3	P43602	733 aa		7.05	□□□□□ -1.28
RUD3	YOR216C	APP1	P53933	587 aa		7.05	□□□□□ -1.28
RUD3	YOR216C	OSH7	P38755	437 aa		7.04	□□□□□ -1.28
RUD3	YOR216C	PKH3	Q03306	898 aa	Predicted RBP	7.04	□□□□□ -1.28
RUD3	YOR216C	TCB1	Q12466	1186 aa		7.04	□□□□□ -1.28
RUD3	YOR216C	CCP1	P00431	361 aa		7.04	□□□□□ -1.28
RUD3	YOR216C	DLD1	P32891	587 aa		7.04	□□□□□ -1.28
RUD3	YOR216C	FIG4	P42837	879 aa		7.01	□□□□□ -1.29
RUD3	YOR216C	LYS5	P50113	272 aa		7.01	□□□□□ -1.29
RUD3	YOR216C	ARG8	P18544	423 aa		7	□□□□□ -1.29
RUD3	YOR216C	JJJ3	P47138	172 aa		6.98	□□□□□ -1.29
RUD3	YOR216C	PUS1	Q12211	544 aa	Known RBP	6.98	□□□□□ -1.29
RUD3	YOR216C	PHM7	Q12252	991 aa		6.98	□□□□□ -1.29
RUD3	YOR216C	CSN12	P47130	423 aa		6.97	□□□□□ -1.29
RUD3	YOR216C	AIM7	Q12156	149 aa		6.97	□□□□□ -1.29
RUD3	YOR216C	MKS1	P34072	584 aa		6.95	□□□□□ -1.3
RUD3	YOR216C	VTC4	P47075	721 aa		6.95	□□□□□ -1.3
RUD3	YOR216C	DFG5	Q05031	458 aa		6.95	□□□□□ -1.3
RUD3	YOR216C	CDC19	P00549	500 aa	Known RBP	6.93	□□□□□ -1.3
RUD3	YOR216C	LSB3	P43603	459 aa	Known RBP	6.93	□□□□□ -1.3
RUD3	YOR216C	RAD59	Q12223	238 aa		6.93	□□□□□ -1.3
RUD3	YOR216C	STE6	P12866	1290 aa		6.92	□□□□□ -1.3
RUD3	YOR216C	NAM8	Q00539	523 aa	Known RBP	6.92	□□□□□ -1.3
RUD3	YOR216C	YPR084W	Q06821	456 aa		6.92	□□□□□ -1.3
RUD3	YOR216C	FBP26	P32604	452 aa		6.91	□□□□□ -1.3
RUD3	YOR216C	TEC1	P18412	486 aa		6.9	□□□□□ -1.31
RUD3	YOR216C	BDS1	Q08347	646 aa		6.9	□□□□□ -1.31
RUD3	YOR216C	MDJ1	P35191	511 aa		6.87	□□□□□ -1.31
RUD3	YOR216C	YFL066C	P43538	392 aa		6.85	□□□□□ -1.31
RUD3	YOR216C	DAL1	P32375	460 aa		6.85	□□□□□ -1.31
RUD3	YOR216C	NSG2	P53898	299 aa		6.83	□□□□□ -1.32
RUD3	YOR216C	AI1	P03875	834 aa		6.82	□□□□□ -1.32
RUD3	YOR216C	MAK16	P10962	306 aa	Predicted RBP	6.82	□□□□□ -1.32
RUD3	YOR216C	GUT2	P32191	649 aa		6.82	□□□□□ -1.32
RUD3	YOR216C	CUZ1	P53899	274 aa		6.82	□□□□□ -1.32
RUD3	YOR216C	ISU1	Q03020	165 aa		6.81	□□□□□ -1.32
RUD3	YOR216C	CCT8	P47079	568 aa	Known RBP	6.8	□□□□□ -1.32
RUD3	YOR216C	ATG20	Q07528	640 aa		6.79	□□□□□ -1.32
RUD3	YOR216C	THI72	Q08579	599 aa		6.78	□□□□□ -1.32
RUD3	YOR216C	RPP2B	P02400	110 aa	Known RBP	6.77	□□□□□ -1.33
RUD3	YOR216C	SSA2	P10592	639 aa	Known RBP	6.77	□□□□□ -1.33
RUD3	YOR216C	CEM1	P39525	442 aa		6.77	□□□□□ -1.33
RUD3	YOR216C	NAF1	P53919	492 aa	Known RBP	6.77	□□□□□ -1.33
RUD3	YOR216C	FRA1	Q07825	749 aa		6.76	□□□□□ -1.33
RUD3	YOR216C	KIN1	P13185	1064 aa		6.75	□□□□□ -1.33
RUD3	YOR216C	UBP15	P50101	1230 aa		6.75	□□□□□ -1.33
RUD3	YOR216C	STE20	Q03497	939 aa	Known RBP	6.75	□□□□□ -1.33
RUD3	YOR216C	SYT1	Q06836	1226 aa		6.75	□□□□□ -1.33
RUD3	YOR216C	MSN5	P52918	1224 aa		6.74	□□□□□ -1.33
RUD3	YOR216C	DIT1	P21623	536 aa		6.73	□□□□□ -1.33
RUD3	YOR216C	DLD3	P39976	496 aa	Known RBP	6.73	□□□□□ -1.33
RUD3	YOR216C	YDR461C-A	Q2V2P7	80 aa		6.73	□□□□□ -1.33
RUD3	YOR216C	SLA1	P32790	1244 aa		6.73	□□□□□ -1.33
RUD3	YOR216C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.73	□□□□□ -1.33	not detected
RUD3	YOR216C	ADE12	P80210	433 aa	Known RBP	6.72	□□□□□ -1.33
RUD3	YOR216C	YPR053C	Q6Q5F3	151 aa		6.72	□□□□□ -1.33
RUD3	YOR216C	SKN7	P38889	622 aa		6.71	□□□□□ -1.34
RUD3	YOR216C	SSN3	P39073	555 aa		6.71	□□□□□ -1.34
RUD3	YOR216C	YMR265C	Q03508	461 aa	Known RBP	6.7	□□□□□ -1.34
RUD3	YOR216C	SPT2	P06843	333 aa	Predicted RBP	6.69	□□□□□ -1.34
RUD3	YOR216C	WTM2	Q12206	467 aa		6.69	□□□□□ -1.34
RUD3	YOR216C	APL6	P46682	809 aa		6.68	□□□□□ -1.34
RUD3	YOR216C	MRX12	P47084	519 aa		6.68	□□□□□ -1.34
RUD3	YOR216C	ISR1	Q06098	443 aa	Known RBP	6.67	□□□□□ -1.34
RUD3	YOR216C	TY1A-DR3	Q12441	440 aa		6.67	□□□□□ -1.34
RUD3	YOR216C	ISF1	P32488	338 aa		6.66	□□□□□ -1.34
RUD3	YOR216C	EMP47	P43555	445 aa		6.66	□□□□□ -1.34
RUD3	YOR216C	CSE4	P36012	229 aa		6.66	□□□□□ -1.34
RUD3	YOR216C	GUA1	P38625	525 aa	Known RBP	6.66	□□□□□ -1.34
RUD3	YOR216C	KRE33	P53914	1056 aa	Known RBP	6.66	□□□□□ -1.34
RUD3	YOR216C	DAT1	P13483	248 aa	Known RBP	6.65	□□□□□ -1.35
RUD3	YOR216C	TDA6	Q06466	467 aa		6.65	□□□□□ -1.35
RUD3	YOR216C	SBE2	P42223	864 aa	Known RBP	6.64	□□□□□ -1.35
RUD3	YOR216C	MCM16	Q12262	181 aa		6.64	□□□□□ -1.35
RUD3	YOR216C	UTR2	P32623	467 aa		6.63	□□□□□ -1.35
RUD3	YOR216C	MCX1	P38323	520 aa	Predicted RBP	6.63	□□□□□ -1.35
RUD3	YOR216C	HAL5	P38970	855 aa	Known RBP	6.62	□□□□□ -1.35
RUD3	YOR216C	YMR187C	Q03236	431 aa		6.62	□□□□□ -1.35
RUD3	YOR216C	YDJ1	P25491	409 aa	Known RBP	6.6	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms