RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C GUT2P32191 649 aa7.45□□□□□ -1.22
CUS1YMR240C RRN7P40992 514 aa7.45□□□□□ -1.22
CUS1YMR240C STE20Q03497 939 aaKnown RBP7.45□□□□□ -1.22
CUS1YMR240C FRA1Q07825 749 aa7.45□□□□□ -1.22
CUS1YMR240C CHL1P22516 861 aaPredicted RBP7.44□□□□□ -1.22
CUS1YMR240C TPD3P31383 635 aa7.44□□□□□ -1.22
CUS1YMR240C ISF1P32488 338 aa7.44□□□□□ -1.22
CUS1YMR240C YML083CQ04526 418 aa7.44□□□□□ -1.22
CUS1YMR240C YPR084WQ06821 456 aa7.44□□□□□ -1.22
CUS1YMR240C ATG3P40344 310 aa7.43□□□□□ -1.22
CUS1YMR240C HXT10P43581 546 aa7.43□□□□□ -1.22
CUS1YMR240C YJL171CP46992 396 aa7.43□□□□□ -1.22
CUS1YMR240C ENV9Q08651 330 aa7.43□□□□□ -1.22
CUS1YMR240C CDC3P32457 520 aaKnown RBP7.42□□□□□ -1.22
CUS1YMR240C SPT16P32558 1035 aaKnown RBP7.42□□□□□ -1.22
CUS1YMR240C SAS4Q04003 481 aa7.41□□□□□ -1.22
CUS1YMR240C UTP13Q05946 817 aaKnown RBP7.4□□□□□ -1.22
CUS1YMR240C VAC17P25591 423 aa7.39□□□□□ -1.23
CUS1YMR240C RRD1P40454 393 aaKnown RBP7.39□□□□□ -1.23
CUS1YMR240C APL6P46682 809 aa7.39□□□□□ -1.23
CUS1YMR240C MOD5P07884 428 aa7.38□□□□□ -1.23
CUS1YMR240C SIS1P25294 352 aaKnown RBP7.38□□□□□ -1.23
CUS1YMR240C KTR7P40504 517 aa7.38□□□□□ -1.23
CUS1YMR240C GAL2P13181 574 aa7.37□□□□□ -1.23
CUS1YMR240C ECM23Q02710 187 aa7.37□□□□□ -1.23
CUS1YMR240C GYP1Q08484 637 aa7.36□□□□□ -1.23
CUS1YMR240C SOH1P38633 127 aa7.34□□□□□ -1.23
CUS1YMR240C PHO87P25360 923 aa7.33□□□□□ -1.24
CUS1YMR240C SLD2P34252 453 aa7.33□□□□□ -1.24
CUS1YMR240C HAP4P14064 554 aa7.32□□□□□ -1.24
CUS1YMR240C MRF1P30775 413 aaPredicted RBP7.32□□□□□ -1.24
CUS1YMR240C UBX7P38349 436 aa7.32□□□□□ -1.24
CUS1YMR240C SSF1P38789 453 aaPredicted RBP7.31□□□□□ -1.24
CUS1YMR240C IXR1P33417 597 aa7.29□□□□□ -1.24
CUS1YMR240C PUF6Q04373 656 aaKnown RBP7.29□□□□□ -1.24
CUS1YMR240C YEL077CQ3E7X8 1277 aa7.29□□□□□ -1.24
CUS1YMR240C TSC13Q99190 310 aa7.29□□□□□ -1.24
CUS1YMR240C ACS2P52910 683 aaKnown RBP7.28□□□□□ -1.24
CUS1YMR240C HAT1Q12341 374 aa7.28□□□□□ -1.24
CUS1YMR240C CWC15Q03772 175 aaKnown RBP7.27□□□□□ -1.24
CUS1YMR240C GAS4Q08271 471 aa7.27□□□□□ -1.24
CUS1YMR240C YFL034WP43564 1073 aa7.27□□□□□ -1.25
CUS1YMR240C ISR1Q06098 443 aaKnown RBP7.27□□□□□ -1.25
CUS1YMR240C KIP2P28743 706 aa7.26□□□□□ -1.25
CUS1YMR240C HAL5P38970 855 aaKnown RBP7.26□□□□□ -1.25
CUS1YMR240C ROM1P53046 1155 aa7.26□□□□□ -1.25
CUS1YMR240C ATG20Q07528 640 aa7.26□□□□□ -1.25
CUS1YMR240C SDH2P21801 266 aa7.25□□□□□ -1.25
CUS1YMR240C VRP1P37370 817 aa7.25□□□□□ -1.25
CUS1YMR240C EMW1P42842 904 aaKnown RBP7.25□□□□□ -1.25
CUS1YMR240C SYH1Q02875 849 aaKnown RBP7.25□□□□□ -1.25
CUS1YMR240C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
CUS1YMR240C PDI1P17967 522 aaKnown RBP7.24□□□□□ -1.25
CUS1YMR240C BDP1P46678 594 aa7.24□□□□□ -1.25
CUS1YMR240C ITT1Q04638 464 aa7.24□□□□□ -1.25
CUS1YMR240C SEN54Q02825 467 aaPredicted RBP7.23□□□□□ -1.25
CUS1YMR240C HDA3Q06623 655 aa7.23□□□□□ -1.25
CUS1YMR240C MIP1P15801 1254 aa7.22□□□□□ -1.25
CUS1YMR240C TPS3P38426 1054 aaKnown RBP7.22□□□□□ -1.25
CUS1YMR240C AIM9P40053 627 aaKnown RBP7.22□□□□□ -1.25
CUS1YMR240C PUS5Q06244 254 aa7.22□□□□□ -1.25
CUS1YMR240C SRS2P12954 1174 aa7.21□□□□□ -1.26
CUS1YMR240C VAN1P23642 535 aa7.21□□□□□ -1.26
CUS1YMR240C STM1P39015 273 aaKnown RBP7.2□□□□□ -1.26
CUS1YMR240C KAR5Q04746 504 aa7.2□□□□□ -1.26
CUS1YMR240C YBL113CQ7M4S9 792 aa7.2□□□□□ -1.26
CUS1YMR240C SPT2P06843 333 aaPredicted RBP7.19□□□□□ -1.26
CUS1YMR240C HEM3P28789 327 aa7.19□□□□□ -1.26
CUS1YMR240C CST6P40535 587 aa7.19□□□□□ -1.26
CUS1YMR240C APP1P53933 587 aa7.19□□□□□ -1.26
CUS1YMR240C FRK1Q03002 865 aaPredicted RBP7.19□□□□□ -1.26
CUS1YMR240C PNP1Q05788 311 aa7.19□□□□□ -1.26
CUS1YMR240C PUN1Q06991 263 aa7.19□□□□□ -1.26
CUS1YMR240C UBP1P25037 809 aa7.18□□□□□ -1.26
CUS1YMR240C NTH2P35172 780 aa7.18□□□□□ -1.26
CUS1YMR240C ERP5P38819 212 aa7.18□□□□□ -1.26
CUS1YMR240C ISU1Q03020 165 aa7.18□□□□□ -1.26
CUS1YMR240C TRS33Q99394 268 aa7.18□□□□□ -1.26
CUS1YMR240C FBP26P32604 452 aa7.17□□□□□ -1.26
CUS1YMR240C MRT4P33201 236 aaKnown RBP7.17□□□□□ -1.26
CUS1YMR240C TRL1P09880 827 aaKnown RBP7.16□□□□□ -1.26
CUS1YMR240C UTR2P32623 467 aa7.16□□□□□ -1.26
CUS1YMR240C BCK2P33306 851 aa7.16□□□□□ -1.26
CUS1YMR240C MKS1P34072 584 aa7.16□□□□□ -1.26
CUS1YMR240C CYT1P07143 309 aa7.15□□□□□ -1.26
CUS1YMR240C RPS6AP0CX37 236 aaKnown RBP7.15□□□□□ -1.26
CUS1YMR240C RPS6BP0CX38 236 aaPredicted RBP7.15□□□□□ -1.26
CUS1YMR240C SEC20P28791 383 aa7.15□□□□□ -1.26
CUS1YMR240C BOL3P39724 118 aa7.15□□□□□ -1.26
CUS1YMR240C ATG1P53104 897 aa7.14□□□□□ -1.27
CUS1YMR240C RPP2BP02400 110 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C FUR4P05316 633 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C SWI5P08153 709 aa7.13□□□□□ -1.27
CUS1YMR240C STE6P12866 1290 aa7.13□□□□□ -1.27
CUS1YMR240C YBL086CP38177 466 aa7.13□□□□□ -1.27
CUS1YMR240C ALD4P46367 519 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C CWH41P53008 833 aa7.13□□□□□ -1.27
CUS1YMR240C HED1Q03937 162 aa7.13□□□□□ -1.27
CUS1YMR240C SUV3P32580 737 aa7.12□□□□□ -1.27
CUS1YMR240C NGR1P32831 672 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 41.2 ms