RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W MTC5Q03897 1148 aa6.67□□□□□ -1.34
DDR48YMR173W ESS1P22696 170 aa6.66□□□□□ -1.34
DDR48YMR173W HPF1Q05164 967 aa6.66□□□□□ -1.34
DDR48YMR173W YBL086CP38177 466 aa6.64□□□□□ -1.35
DDR48YMR173W AAD14P42884 376 aa6.64□□□□□ -1.35
DDR48YMR173W ARG82P07250 355 aa6.63□□□□□ -1.35
DDR48YMR173W YJU3P28321 313 aa6.63□□□□□ -1.35
DDR48YMR173W ATF2P53296 535 aa6.63□□□□□ -1.35
DDR48YMR173W LSC2P53312 427 aa6.63□□□□□ -1.35
DDR48YMR173W RSC30P38781 883 aa6.61□□□□□ -1.35
DDR48YMR173W UBP2Q01476 1272 aa6.61□□□□□ -1.35
DDR48YMR173W YJR098CP47139 656 aa6.6□□□□□ -1.35
DDR48YMR173W ITT1Q04638 464 aa6.6□□□□□ -1.35
DDR48YMR173W DLD1P32891 587 aa6.59□□□□□ -1.35
DDR48YMR173W APP1P53933 587 aa6.59□□□□□ -1.35
DDR48YMR173W EMW1P42842 904 aaKnown RBP6.58□□□□□ -1.36
DDR48YMR173W TCB1Q12466 1186 aa6.57□□□□□ -1.36
DDR48YMR173W KTR1P27810 393 aaKnown RBP6.55□□□□□ -1.36
DDR48YMR173W GLC3P32775 704 aa6.55□□□□□ -1.36
DDR48YMR173W YNR021WP53723 404 aaKnown RBP6.55□□□□□ -1.36
DDR48YMR173W ROG3P43602 733 aa6.54□□□□□ -1.36
DDR48YMR173W OSH7P38755 437 aa6.53□□□□□ -1.36
DDR48YMR173W PKH3Q03306 898 aaPredicted RBP6.53□□□□□ -1.36
DDR48YMR173W TY1A-MR1Q04215 440 aa6.53□□□□□ -1.36
DDR48YMR173W FIG4P42837 879 aa6.51□□□□□ -1.37
DDR48YMR173W YPR204WQ08995 1032 aa6.51□□□□□ -1.37
DDR48YMR173W CCP1P00431 361 aa6.5□□□□□ -1.37
DDR48YMR173W ARG8P18544 423 aa6.5□□□□□ -1.37
DDR48YMR173W DPH6Q12429 685 aa6.5□□□□□ -1.37
DDR48YMR173W MKS1P34072 584 aa6.49□□□□□ -1.37
DDR48YMR173W ICP55P40051 511 aa6.49□□□□□ -1.37
DDR48YMR173W DFG5Q05031 458 aa6.49□□□□□ -1.37
DDR48YMR173W LYS5P50113 272 aa6.45□□□□□ -1.38
DDR48YMR173W AIM7Q12156 149 aa6.45□□□□□ -1.38
DDR48YMR173W CSN12P47130 423 aa6.44□□□□□ -1.38
DDR48YMR173W NAM8Q00539 523 aaKnown RBP6.44□□□□□ -1.38
DDR48YMR173W BDS1Q08347 646 aa6.44□□□□□ -1.38
DDR48YMR173W PUS1Q12211 544 aaKnown RBP6.44□□□□□ -1.38
DDR48YMR173W CDC19P00549 500 aaKnown RBP6.43□□□□□ -1.38
DDR48YMR173W YPR084WQ06821 456 aa6.43□□□□□ -1.38
DDR48YMR173W RQC2Q12532 1038 aaKnown RBP6.43□□□□□ -1.38
DDR48YMR173W TEC1P18412 486 aa6.42□□□□□ -1.38
DDR48YMR173W FBP26P32604 452 aa6.42□□□□□ -1.38
DDR48YMR173W JJJ3P47138 172 aa6.42□□□□□ -1.38
DDR48YMR173W RAD59Q12223 238 aa6.42□□□□□ -1.38
DDR48YMR173W STE6P12866 1290 aa6.41□□□□□ -1.38
DDR48YMR173W MDJ1P35191 511 aa6.41□□□□□ -1.38
DDR48YMR173W LSB3P43603 459 aaKnown RBP6.41□□□□□ -1.38
DDR48YMR173W PHM7Q12252 991 aa6.4□□□□□ -1.38
DDR48YMR173W VTC4P47075 721 aa6.39□□□□□ -1.39
DDR48YMR173W NSG2P53898 299 aa6.34□□□□□ -1.39
DDR48YMR173W CUZ1P53899 274 aa6.34□□□□□ -1.39
DDR48YMR173W ISU1Q03020 165 aa6.34□□□□□ -1.39
DDR48YMR173W GUT2P32191 649 aa6.33□□□□□ -1.4
DDR48YMR173W DAL1P32375 460 aa6.33□□□□□ -1.4
DDR48YMR173W YFL066CP43538 392 aa6.33□□□□□ -1.4
DDR48YMR173W MAK16P10962 306 aaPredicted RBP6.32□□□□□ -1.4
DDR48YMR173W ATG20Q07528 640 aa6.32□□□□□ -1.4
DDR48YMR173W THI72Q08579 599 aa6.31□□□□□ -1.4
DDR48YMR173W AI1P03875 834 aa6.3□□□□□ -1.4
DDR48YMR173W CEM1P39525 442 aa6.29□□□□□ -1.4
DDR48YMR173W NAF1P53919 492 aaKnown RBP6.29□□□□□ -1.4
DDR48YMR173W FRA1Q07825 749 aa6.29□□□□□ -1.4
DDR48YMR173W DLD3P39976 496 aaKnown RBP6.28□□□□□ -1.4
DDR48YMR173W STE20Q03497 939 aaKnown RBP6.27□□□□□ -1.41
DDR48YMR173W RPP2BP02400 110 aaKnown RBP6.26□□□□□ -1.41
DDR48YMR173W SSA2P10592 639 aaKnown RBP6.26□□□□□ -1.41
DDR48YMR173W CCT8P47079 568 aaKnown RBP6.25□□□□□ -1.41
DDR48YMR173W UBP15P50101 1230 aa6.25□□□□□ -1.41
DDR48YMR173W SLA1P32790 1244 aa6.24□□□□□ -1.41
DDR48YMR173W SYT1Q06836 1226 aa6.24□□□□□ -1.41
DDR48YMR173W DIT1P21623 536 aa6.23□□□□□ -1.41
DDR48YMR173W SSN3P39073 555 aa6.23□□□□□ -1.41
DDR48YMR173W MSN5P52918 1224 aa6.23□□□□□ -1.41
DDR48YMR173W YMR265CQ03508 461 aaKnown RBP6.23□□□□□ -1.41
DDR48YMR173W WTM2Q12206 467 aa6.23□□□□□ -1.41
DDR48YMR173W TY1A-DR3Q12441 440 aa6.22□□□□□ -1.41
DDR48YMR173W ADE12P80210 433 aaKnown RBP6.21□□□□□ -1.42
DDR48YMR173W SPT2P06843 333 aaPredicted RBP6.2□□□□□ -1.42
DDR48YMR173W KIN1P13185 1064 aa6.2□□□□□ -1.42
DDR48YMR173W APL6P46682 809 aa6.2□□□□□ -1.42
DDR48YMR173W NRD1P53617 575 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
DDR48YMR173W KRE33P53914 1056 aaKnown RBP6.2□□□□□ -1.42
DDR48YMR173W YDR461C-AQ2V2P7 80 aa6.2□□□□□ -1.42
DDR48YMR173W YPR053CQ6Q5F3 151 aa6.2□□□□□ -1.42
DDR48YMR173W ISR1Q06098 443 aaKnown RBP6.19□□□□□ -1.42
DDR48YMR173W EMP47P43555 445 aa6.18□□□□□ -1.42
DDR48YMR173W MRX12P47084 519 aa6.18□□□□□ -1.42
DDR48YMR173W DAT1P13483 248 aaKnown RBP6.17□□□□□ -1.42
DDR48YMR173W ISF1P32488 338 aa6.17□□□□□ -1.42
DDR48YMR173W UTR2P32623 467 aa6.17□□□□□ -1.42
DDR48YMR173W CSE4P36012 229 aa6.17□□□□□ -1.42
DDR48YMR173W SBE2P42223 864 aaKnown RBP6.17□□□□□ -1.42
DDR48YMR173W TDA6Q06466 467 aa6.17□□□□□ -1.42
DDR48YMR173W AHP1P38013 176 aaKnown RBP6.16□□□□□ -1.42
DDR48YMR173W SKN7P38889 622 aa6.16□□□□□ -1.42
DDR48YMR173W MCM16Q12262 181 aa6.16□□□□□ -1.42
DDR48YMR173W HAL5P38970 855 aaKnown RBP6.14□□□□□ -1.43
DDR48YMR173W UTP7P40055 554 aaKnown RBP6.13□□□□□ -1.43
DDR48YMR173W YMR187CQ03236 431 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms