RNA–Protein interactions for RNA: YMR026C

PEX12, Transcript of C3HC4-type RING-finger peroxin and E3 ubiquitin ligase, yeastyeast

Gene PEX12, Length 1,200 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX12YMR026C RTG2P32608 588 aaKnown RBP9.42□□□□□ -0.9
PEX12YMR026C YPR084WQ06821 456 aa9.42□□□□□ -0.9
PEX12YMR026C MCM16Q12262 181 aa9.42□□□□□ -0.9
PEX12YMR026C KIP2P28743 706 aa9.41□□□□□ -0.9
PEX12YMR026C GUT2P32191 649 aa9.41□□□□□ -0.9
PEX12YMR026C IXR1P33417 597 aa9.4□□□□□ -0.9
PEX12YMR026C SYH1Q02875 849 aaKnown RBP9.4□□□□□ -0.9
PEX12YMR026C YPP1P46951 817 aa9.39□□□□□ -0.91
PEX12YMR026C STE20Q03497 939 aaKnown RBP9.39□□□□□ -0.91
PEX12YMR026C EMP47P43555 445 aa9.38□□□□□ -0.91
PEX12YMR026C RIM21P48565 533 aa9.38□□□□□ -0.91
PEX12YMR026C HED1Q03937 162 aa9.38□□□□□ -0.91
PEX12YMR026C FRA1Q07825 749 aa9.38□□□□□ -0.91
PEX12YMR026C YPR204WQ08995 1032 aa9.38□□□□□ -0.91
PEX12YMR026C ISF1P32488 338 aa9.37□□□□□ -0.91
PEX12YMR026C CLA4P48562 842 aa9.36□□□□□ -0.91
PEX12YMR026C ITT1Q04638 464 aa9.35□□□□□ -0.91
PEX12YMR026C MRX10Q05648 414 aa9.35□□□□□ -0.91
PEX12YMR026C ENO1P00924 437 aaKnown RBP9.34□□□□□ -0.91
PEX12YMR026C MRX12P47084 519 aa9.34□□□□□ -0.91
PEX12YMR026C RDS2P19541 446 aaKnown RBP9.29□□□□□ -0.92
PEX12YMR026C AIR1P40507 360 aaKnown RBP9.29□□□□□ -0.92
PEX12YMR026C MRT4P33201 236 aaKnown RBP9.28□□□□□ -0.92
PEX12YMR026C EMW1P42842 904 aaKnown RBP9.28□□□□□ -0.92
PEX12YMR026C APL6P46682 809 aa9.28□□□□□ -0.92
PEX12YMR026C CDC4P07834 779 aa9.27□□□□□ -0.93
PEX12YMR026C TTI1P36097 1038 aa9.27□□□□□ -0.93
PEX12YMR026C APP1P53933 587 aa9.27□□□□□ -0.93
PEX12YMR026C ENV9Q08651 330 aa9.27□□□□□ -0.93
PEX12YMR026C MET32Q12041 191 aa9.27□□□□□ -0.93
PEX12YMR026C ATG3P40344 310 aa9.26□□□□□ -0.93
PEX12YMR026C SIS2P36024 562 aa9.24□□□□□ -0.93
PEX12YMR026C UTP13Q05946 817 aaKnown RBP9.24□□□□□ -0.93
PEX12YMR026C PEP12P32854 288 aa9.23□□□□□ -0.93
PEX12YMR026C ATG20Q07528 640 aa9.23□□□□□ -0.93
PEX12YMR026C CPS1P27614 576 aa9.22□□□□□ -0.93
PEX12YMR026C SOH1P38633 127 aa9.22□□□□□ -0.93
PEX12YMR026C ISR1Q06098 443 aaKnown RBP9.2□□□□□ -0.94
PEX12YMR026C SSA4P22202 642 aaKnown RBP9.19□□□□□ -0.94
PEX12YMR026C MKS1P34072 584 aa9.19□□□□□ -0.94
PEX12YMR026C ASH1P34233 588 aa9.19□□□□□ -0.94
PEX12YMR026C YBL086CP38177 466 aa9.19□□□□□ -0.94
PEX12YMR026C AFT1P22149 690 aa9.18□□□□□ -0.94
PEX12YMR026C HST3P53687 447 aa9.18□□□□□ -0.94
PEX12YMR026C SRC1Q03707 834 aa9.18□□□□□ -0.94
PEX12YMR026C TRK1P12685 1235 aa9.17□□□□□ -0.94
PEX12YMR026C FBP26P32604 452 aa9.16□□□□□ -0.94
PEX12YMR026C HAL5P38970 855 aaKnown RBP9.16□□□□□ -0.94
PEX12YMR026C RTT106P40161 455 aa9.16□□□□□ -0.94
PEX12YMR026C KTR7P40504 517 aa9.15□□□□□ -0.94
PEX12YMR026C ISU1Q03020 165 aa9.15□□□□□ -0.94
PEX12YMR026C SUB2Q07478 446 aaKnown RBP9.15□□□□□ -0.94
PEX12YMR026C TGL4P36165 910 aa9.14□□□□□ -0.95
PEX12YMR026C MSB3P48566 633 aaPredicted RBP9.14□□□□□ -0.95
PEX12YMR026C UGA3P26370 528 aa9.13□□□□□ -0.95
PEX12YMR026C DFG5Q05031 458 aa9.13□□□□□ -0.95
PEX12YMR026C STE6P12866 1290 aa9.12□□□□□ -0.95
PEX12YMR026C HDA3Q06623 655 aa9.11□□□□□ -0.95
PEX12YMR026C PUP1P25043 261 aa9.1□□□□□ -0.95
PEX12YMR026C BDS1Q08347 646 aa9.1□□□□□ -0.95
PEX12YMR026C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.1□□□□□ -0.95not detected
PEX12YMR026C SPT2P06843 333 aaPredicted RBP9.09□□□□□ -0.95
PEX12YMR026C MIP1P15801 1254 aa9.09□□□□□ -0.95
PEX12YMR026C GAL2P13181 574 aa9.08□□□□□ -0.96
PEX12YMR026C NOB1Q08444 459 aaKnown RBP9.08□□□□□ -0.96
PEX12YMR026C YJR115WP47152 169 aa9.07□□□□□ -0.96
PEX12YMR026C TSC13Q99190 310 aa9.07□□□□□ -0.96
PEX12YMR026C PHO87P25360 923 aa9.06□□□□□ -0.96
PEX12YMR026C UTR2P32623 467 aa9.06□□□□□ -0.96
PEX12YMR026C ECM23Q02710 187 aa9.06□□□□□ -0.96
PEX12YMR026C RPP2BP02400 110 aaKnown RBP9.05□□□□□ -0.96
PEX12YMR026C DAT1P13483 248 aaKnown RBP9.05□□□□□ -0.96
PEX12YMR026C YFL034WP43564 1073 aa9.05□□□□□ -0.96
PEX12YMR026C ARG82P07250 355 aa9.04□□□□□ -0.96
PEX12YMR026C HAP4P14064 554 aa9.04□□□□□ -0.96
PEX12YMR026C PDI1P17967 522 aaKnown RBP9.04□□□□□ -0.96
PEX12YMR026C AIM9P40053 627 aaKnown RBP9.04□□□□□ -0.96
PEX12YMR026C PTK2P47116 818 aaKnown RBP9.04□□□□□ -0.96
PEX12YMR026C ACS2P52910 683 aaKnown RBP9.04□□□□□ -0.96
PEX12YMR026C BRE2P43132 505 aa9.03□□□□□ -0.96
PEX12YMR026C GCR2Q01722 534 aa9.03□□□□□ -0.96
PEX12YMR026C YML083CQ04526 418 aa9.03□□□□□ -0.96
PEX12YMR026C WTM2Q12206 467 aa9.03□□□□□ -0.96
PEX12YMR026C TBS1P38114 1094 aa9.02□□□□□ -0.97
PEX12YMR026C SLX8P40072 274 aa9.02□□□□□ -0.97
PEX12YMR026C AAD14P42884 376 aa9.02□□□□□ -0.97
PEX12YMR026C SRF1Q12516 437 aa9.02□□□□□ -0.97
PEX12YMR026C NTH2P35172 780 aa9□□□□□ -0.97
PEX12YMR026C SSA1P10591 642 aaKnown RBP8.99□□□□□ -0.97
PEX12YMR026C UBX7P38349 436 aa8.99□□□□□ -0.97
PEX12YMR026C DLD3P39976 496 aaKnown RBP8.99□□□□□ -0.97
PEX12YMR026C SWI5P08153 709 aa8.98□□□□□ -0.97
PEX12YMR026C ROM1P53046 1155 aa8.98□□□□□ -0.97
PEX12YMR026C GAS4Q08271 471 aa8.98□□□□□ -0.97
PEX12YMR026C NUP85P46673 744 aa8.97□□□□□ -0.97
PEX12YMR026C RPS6AP0CX37 236 aaKnown RBP8.96□□□□□ -0.98
PEX12YMR026C RPS6BP0CX38 236 aaPredicted RBP8.96□□□□□ -0.98
PEX12YMR026C UTP7P40055 554 aaKnown RBP8.93□□□□□ -0.98
PEX12YMR026C DLD1P32891 587 aa8.92□□□□□ -0.98
PEX12YMR026C RPL34AP87262 121 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms