RNA–Protein interactions for RNA: YLR442C

SIR3, Transcript of Silencing protein, yeastyeast

Gene SIR3, Length 2,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR3YLR442C YPR204WQ08995 1032 aa3.6□□□□□ -1.83
SIR3YLR442C DIT2P21595 489 aa3.6□□□□□ -1.83
SIR3YLR442C YBL086CP38177 466 aa3.6□□□□□ -1.83
SIR3YLR442C LSC2P53312 427 aa3.6□□□□□ -1.83
SIR3YLR442C UBP2Q01476 1272 aa3.6□□□□□ -1.83
SIR3YLR442C VAC17P25591 423 aa3.59□□□□□ -1.83
SIR3YLR442C ARG82P07250 355 aa3.59□□□□□ -1.84
SIR3YLR442C ICP55P40051 511 aa3.59□□□□□ -1.84
SIR3YLR442C DPH6Q12429 685 aa3.58□□□□□ -1.84
SIR3YLR442C YJR098CP47139 656 aa3.58□□□□□ -1.84
SIR3YLR442C ROG3P43602 733 aa3.57□□□□□ -1.84
SIR3YLR442C TY1A-MR1Q04215 440 aa3.57□□□□□ -1.84
SIR3YLR442C SCJ1P25303 377 aa3.57□□□□□ -1.84
SIR3YLR442C CCP1P00431 361 aa3.56□□□□□ -1.84
SIR3YLR442C TCB1Q12466 1186 aa3.56□□□□□ -1.84
SIR3YLR442C OSH7P38755 437 aa3.55□□□□□ -1.84
SIR3YLR442C PUS1Q12211 544 aaKnown RBP3.55□□□□□ -1.84
SIR3YLR442C EMW1P42842 904 aaKnown RBP3.55□□□□□ -1.84
SIR3YLR442C MMP1Q12372 583 aa3.55□□□□□ -1.84
SIR3YLR442C PHM7Q12252 991 aa3.54□□□□□ -1.84
SIR3YLR442C DLD1P32891 587 aa3.54□□□□□ -1.84
SIR3YLR442C LEO1P38439 464 aa3.54□□□□□ -1.84
SIR3YLR442C LYS5P50113 272 aa3.54□□□□□ -1.84
SIR3YLR442C RSC30P38781 883 aa3.54□□□□□ -1.84
SIR3YLR442C JJJ3P47138 172 aa3.54□□□□□ -1.84
SIR3YLR442C GLN1P32288 370 aaKnown RBP3.53□□□□□ -1.84
SIR3YLR442C LSB3P43603 459 aaKnown RBP3.53□□□□□ -1.84
SIR3YLR442C YRB30P53107 440 aaPredicted RBP3.53□□□□□ -1.84
SIR3YLR442C APP1P53933 587 aa3.51□□□□□ -1.85
SIR3YLR442C ESS1P22696 170 aa3.51□□□□□ -1.85
SIR3YLR442C SPB4P25808 606 aaPredicted RBP3.5□□□□□ -1.85
SIR3YLR442C YJU3P28321 313 aa3.5□□□□□ -1.85
SIR3YLR442C MDJ1P35191 511 aa3.49□□□□□ -1.85
SIR3YLR442C CDC19P00549 500 aaKnown RBP3.49□□□□□ -1.85
SIR3YLR442C DMA1P38823 416 aa3.49□□□□□ -1.85
SIR3YLR442C VTC4P47075 721 aa3.49□□□□□ -1.85
SIR3YLR442C NAM8Q00539 523 aaKnown RBP3.49□□□□□ -1.85
SIR3YLR442C ITT1Q04638 464 aa3.49□□□□□ -1.85
SIR3YLR442C FIG4P42837 879 aa3.47□□□□□ -1.85
SIR3YLR442C YFL066CP43538 392 aa3.47□□□□□ -1.85
SIR3YLR442C MKS1P34072 584 aa3.47□□□□□ -1.85
SIR3YLR442C NSG2P53898 299 aa3.47□□□□□ -1.85
SIR3YLR442C DFG5Q05031 458 aa3.47□□□□□ -1.85
SIR3YLR442C NAP1P25293 417 aaKnown RBP3.46□□□□□ -1.86
SIR3YLR442C ATF2P53296 535 aa3.46□□□□□ -1.86
SIR3YLR442C STE6P12866 1290 aa3.46□□□□□ -1.86
SIR3YLR442C FBP26P32604 452 aa3.46□□□□□ -1.86
SIR3YLR442C CCT8P47079 568 aaKnown RBP3.46□□□□□ -1.86
SIR3YLR442C KTR1P27810 393 aaKnown RBP3.45□□□□□ -1.86
SIR3YLR442C BDS1Q08347 646 aa3.45□□□□□ -1.86
SIR3YLR442C AI1P03875 834 aa3.44□□□□□ -1.86
SIR3YLR442C NRD1P53617 575 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SIR3YLR442C CUZ1P53899 274 aa3.44□□□□□ -1.86
SIR3YLR442C YPR084WQ06821 456 aa3.44□□□□□ -1.86
SIR3YLR442C YNR021WP53723 404 aaKnown RBP3.44□□□□□ -1.86
SIR3YLR442C DAL1P32375 460 aa3.43□□□□□ -1.86
SIR3YLR442C PKH3Q03306 898 aaPredicted RBP3.43□□□□□ -1.86
SIR3YLR442C THI72Q08579 599 aa3.43□□□□□ -1.86
SIR3YLR442C TEC1P18412 486 aa3.42□□□□□ -1.86
SIR3YLR442C ARG8P18544 423 aa3.41□□□□□ -1.86
SIR3YLR442C SIS2P36024 562 aa3.41□□□□□ -1.86
SIR3YLR442C GLC3P32775 704 aa3.4□□□□□ -1.86
SIR3YLR442C SKN7P38889 622 aa3.4□□□□□ -1.86
SIR3YLR442C CEM1P39525 442 aa3.4□□□□□ -1.86
SIR3YLR442C SYT1Q06836 1226 aa3.4□□□□□ -1.86
SIR3YLR442C YPR053CQ6Q5F3 151 aa3.4□□□□□ -1.86
SIR3YLR442C ISU1Q03020 165 aa3.4□□□□□ -1.87
SIR3YLR442C MNN4P36044 1178 aa3.4□□□□□ -1.87
SIR3YLR442C AIM7Q12156 149 aa3.39□□□□□ -1.87
SIR3YLR442C DIT1P21623 536 aa3.39□□□□□ -1.87
SIR3YLR442C UBP15P50101 1230 aa3.39□□□□□ -1.87
SIR3YLR442C ADE12P80210 433 aaKnown RBP3.39□□□□□ -1.87
SIR3YLR442C RAD59Q12223 238 aa3.38□□□□□ -1.87
SIR3YLR442C YDR461C-AQ2V2P7 80 aa3.38□□□□□ -1.87
SIR3YLR442C SLA1P32790 1244 aa3.37□□□□□ -1.87
SIR3YLR442C CSN12P47130 423 aa3.37□□□□□ -1.87
SIR3YLR442C MSN5P52918 1224 aa3.37□□□□□ -1.87
SIR3YLR442C ATG20Q07528 640 aa3.37□□□□□ -1.87
SIR3YLR442C GUT2P32191 649 aa3.37□□□□□ -1.87
SIR3YLR442C SSN3P39073 555 aa3.37□□□□□ -1.87
SIR3YLR442C RPP2BP02400 110 aaKnown RBP3.36□□□□□ -1.87
SIR3YLR442C MAK16P10962 306 aaPredicted RBP3.36□□□□□ -1.87
SIR3YLR442C TDA6Q06466 467 aa3.36□□□□□ -1.87
SIR3YLR442C DLD3P39976 496 aaKnown RBP3.36□□□□□ -1.87
SIR3YLR442C SBE2P42223 864 aaKnown RBP3.36□□□□□ -1.87
SIR3YLR442C YMR265CQ03508 461 aaKnown RBP3.36□□□□□ -1.87
SIR3YLR442C IOC4Q04213 475 aa3.36□□□□□ -1.87
SIR3YLR442C FRA1Q07825 749 aa3.36□□□□□ -1.87
SIR3YLR442C EBP2P36049 427 aaKnown RBP3.35□□□□□ -1.87
SIR3YLR442C NAF1P53919 492 aaKnown RBP3.35□□□□□ -1.87
SIR3YLR442C TY1A-DR3Q12441 440 aa3.35□□□□□ -1.87
SIR3YLR442C YMR187CQ03236 431 aa3.35□□□□□ -1.87
SIR3YLR442C MCX1P38323 520 aaPredicted RBP3.34□□□□□ -1.87
SIR3YLR442C RPS0BP46654 252 aaKnown RBP3.34□□□□□ -1.87
SIR3YLR442C KRE33P53914 1056 aaKnown RBP3.34□□□□□ -1.87
SIR3YLR442C SBP1P10080 294 aaKnown RBP3.33□□□□□ -1.88
SIR3YLR442C CAB3P36076 571 aa3.33□□□□□ -1.88
SIR3YLR442C WTM2Q12206 467 aa3.33□□□□□ -1.88
SIR3YLR442C SPT2P06843 333 aaPredicted RBP3.33□□□□□ -1.88
SIR3YLR442C APL6P46682 809 aa3.33□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms