RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C UBP2Q01476 1272 aa7.86□□□□□ -1.15
CMS1YLR003C AAD14P42884 376 aa7.85□□□□□ -1.15
CMS1YLR003C MMP1Q12372 583 aa7.85□□□□□ -1.15
CMS1YLR003C VAC17P25591 423 aa7.83□□□□□ -1.16
CMS1YLR003C YBL086CP38177 466 aa7.82□□□□□ -1.16
CMS1YLR003C YPR204WQ08995 1032 aa7.82□□□□□ -1.16
CMS1YLR003C GLN1P32288 370 aaKnown RBP7.8□□□□□ -1.16
CMS1YLR003C YJR098CP47139 656 aa7.8□□□□□ -1.16
CMS1YLR003C ICP55P40051 511 aa7.78□□□□□ -1.16
CMS1YLR003C TCB1Q12466 1186 aa7.78□□□□□ -1.16
CMS1YLR003C ESS1P22696 170 aa7.77□□□□□ -1.17
CMS1YLR003C DLD1P32891 587 aa7.77□□□□□ -1.17
CMS1YLR003C DPH6Q12429 685 aa7.77□□□□□ -1.17
CMS1YLR003C ROG3P43602 733 aa7.76□□□□□ -1.17
CMS1YLR003C EMW1P42842 904 aaKnown RBP7.75□□□□□ -1.17
CMS1YLR003C OSH7P38755 437 aa7.74□□□□□ -1.17
CMS1YLR003C ATF2P53296 535 aa7.74□□□□□ -1.17
CMS1YLR003C APP1P53933 587 aa7.74□□□□□ -1.17
CMS1YLR003C TY1A-MR1Q04215 440 aa7.74□□□□□ -1.17
CMS1YLR003C PUS1Q12211 544 aaKnown RBP7.74□□□□□ -1.17
CMS1YLR003C YJU3P28321 313 aa7.72□□□□□ -1.17
CMS1YLR003C RSC30P38781 883 aa7.7□□□□□ -1.18
CMS1YLR003C ITT1Q04638 464 aa7.7□□□□□ -1.18
CMS1YLR003C LYS5P50113 272 aa7.69□□□□□ -1.18
CMS1YLR003C CCP1P00431 361 aa7.68□□□□□ -1.18
CMS1YLR003C LSB3P43603 459 aaKnown RBP7.68□□□□□ -1.18
CMS1YLR003C PHM7Q12252 991 aa7.67□□□□□ -1.18
CMS1YLR003C DMA1P38823 416 aa7.66□□□□□ -1.18
CMS1YLR003C MKS1P34072 584 aa7.64□□□□□ -1.19
CMS1YLR003C DFG5Q05031 458 aa7.64□□□□□ -1.19
CMS1YLR003C JJJ3P47138 172 aa7.63□□□□□ -1.19
CMS1YLR003C PKH3Q03306 898 aaPredicted RBP7.63□□□□□ -1.19
CMS1YLR003C FIG4P42837 879 aa7.62□□□□□ -1.19
CMS1YLR003C MDJ1P35191 511 aa7.61□□□□□ -1.19
CMS1YLR003C ARG8P18544 423 aa7.6□□□□□ -1.19
CMS1YLR003C YNR021WP53723 404 aaKnown RBP7.6□□□□□ -1.19
CMS1YLR003C BDS1Q08347 646 aa7.6□□□□□ -1.19
CMS1YLR003C CDC19P00549 500 aaKnown RBP7.58□□□□□ -1.2
CMS1YLR003C GLC3P32775 704 aa7.58□□□□□ -1.2
CMS1YLR003C KTR1P27810 393 aaKnown RBP7.57□□□□□ -1.2
CMS1YLR003C NAM8Q00539 523 aaKnown RBP7.57□□□□□ -1.2
CMS1YLR003C FBP26P32604 452 aa7.56□□□□□ -1.2
CMS1YLR003C NSG2P53898 299 aa7.56□□□□□ -1.2
CMS1YLR003C STE6P12866 1290 aa7.54□□□□□ -1.2
CMS1YLR003C VTC4P47075 721 aa7.54□□□□□ -1.2
CMS1YLR003C TEC1P18412 486 aa7.53□□□□□ -1.2
CMS1YLR003C THI72Q08579 599 aa7.52□□□□□ -1.21
CMS1YLR003C AI1P03875 834 aa7.51□□□□□ -1.21
CMS1YLR003C CSN12P47130 423 aa7.5□□□□□ -1.21
CMS1YLR003C CUZ1P53899 274 aa7.5□□□□□ -1.21
CMS1YLR003C YPR084WQ06821 456 aa7.49□□□□□ -1.21
CMS1YLR003C YFL066CP43538 392 aa7.48□□□□□ -1.21
CMS1YLR003C AIM7Q12156 149 aa7.48□□□□□ -1.21
CMS1YLR003C RAD59Q12223 238 aa7.48□□□□□ -1.21
CMS1YLR003C DAL1P32375 460 aa7.47□□□□□ -1.21
CMS1YLR003C CEM1P39525 442 aa7.47□□□□□ -1.21
CMS1YLR003C CCT8P47079 568 aaKnown RBP7.46□□□□□ -1.22
CMS1YLR003C ISU1Q03020 165 aa7.46□□□□□ -1.22
CMS1YLR003C NRD1P53617 575 aaKnown RBP RIP-Chip data7.45□□□□□ -1.22 RIP-Chip
CMS1YLR003C GUT2P32191 649 aa7.43□□□□□ -1.22
CMS1YLR003C ATG20Q07528 640 aa7.43□□□□□ -1.22
CMS1YLR003C RPP2BP02400 110 aaKnown RBP7.42□□□□□ -1.22
CMS1YLR003C DLD3P39976 496 aaKnown RBP7.42□□□□□ -1.22
CMS1YLR003C ADE12P80210 433 aaKnown RBP7.4□□□□□ -1.22
CMS1YLR003C YPR053CQ6Q5F3 151 aa7.4□□□□□ -1.22
CMS1YLR003C DIT1P21623 536 aa7.38□□□□□ -1.23
CMS1YLR003C UBP15P50101 1230 aa7.38□□□□□ -1.23
CMS1YLR003C YMR265CQ03508 461 aaKnown RBP7.38□□□□□ -1.23
CMS1YLR003C SYT1Q06836 1226 aa7.38□□□□□ -1.23
CMS1YLR003C MAK16P10962 306 aaPredicted RBP7.37□□□□□ -1.23
CMS1YLR003C MSN5P52918 1224 aa7.35□□□□□ -1.23
CMS1YLR003C NAF1P53919 492 aaKnown RBP7.35□□□□□ -1.23
CMS1YLR003C STE20Q03497 939 aaKnown RBP7.35□□□□□ -1.23
CMS1YLR003C FRA1Q07825 749 aa7.35□□□□□ -1.23
CMS1YLR003C KRE33P53914 1056 aaKnown RBP7.34□□□□□ -1.23
CMS1YLR003C YDR461C-AQ2V2P7 80 aa7.34□□□□□ -1.23
CMS1YLR003C SBP1P10080 294 aaKnown RBP7.33□□□□□ -1.24
CMS1YLR003C SKN7P38889 622 aa7.33□□□□□ -1.24
CMS1YLR003C SLA1P32790 1244 aa7.32□□□□□ -1.24
CMS1YLR003C SSN3P39073 555 aa7.32□□□□□ -1.24
CMS1YLR003C SBE2P42223 864 aaKnown RBP7.32□□□□□ -1.24
CMS1YLR003C TDA6Q06466 467 aa7.32□□□□□ -1.24
CMS1YLR003C SSA2P10592 639 aaKnown RBP7.31□□□□□ -1.24
CMS1YLR003C YMR187CQ03236 431 aa7.31□□□□□ -1.24
CMS1YLR003C WTM2Q12206 467 aa7.31□□□□□ -1.24
CMS1YLR003C TY1A-DR3Q12441 440 aa7.28□□□□□ -1.24
CMS1YLR003C AHP1P38013 176 aaKnown RBP7.27□□□□□ -1.25
CMS1YLR003C SPT2P06843 333 aaPredicted RBP7.26□□□□□ -1.25
CMS1YLR003C DAT1P13483 248 aaKnown RBP7.26□□□□□ -1.25
CMS1YLR003C ISR1Q06098 443 aaKnown RBP7.26□□□□□ -1.25
CMS1YLR003C MRX12P47084 519 aa7.25□□□□□ -1.25
CMS1YLR003C YNR014WP53719 212 aa7.25□□□□□ -1.25
CMS1YLR003C UTR2P32623 467 aa7.24□□□□□ -1.25
CMS1YLR003C MCX1P38323 520 aaPredicted RBP7.23□□□□□ -1.25
CMS1YLR003C TBS1P38114 1094 aa7.22□□□□□ -1.25
CMS1YLR003C EMP47P43555 445 aa7.21□□□□□ -1.26
CMS1YLR003C APL6P46682 809 aa7.21□□□□□ -1.26
CMS1YLR003C GPM1P00950 247 aaKnown RBP7.2□□□□□ -1.26
CMS1YLR003C FPS1P23900 669 aa7.19□□□□□ -1.26
CMS1YLR003C CSE4P36012 229 aa7.19□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms