RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C DLD1P32891 587 aa4.46□□□□□ -1.7
VPS55YJR044C BUB1P41695 1021 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
VPS55YJR044C AAD14P42884 376 aa4.46□□□□□ -1.7
VPS55YJR044C APP1P53933 587 aa4.46□□□□□ -1.7
VPS55YJR044C VAC17P25591 423 aa4.45□□□□□ -1.7
VPS55YJR044C DMA1P38823 416 aa4.45□□□□□ -1.7
VPS55YJR044C YBL086CP38177 466 aa4.44□□□□□ -1.7
VPS55YJR044C LSC2P53312 427 aa4.44□□□□□ -1.7
VPS55YJR044C ARG82P07250 355 aa4.43□□□□□ -1.7
VPS55YJR044C GLN1P32288 370 aaKnown RBP4.43□□□□□ -1.7
VPS55YJR044C TCB1Q12466 1186 aa4.43□□□□□ -1.7
VPS55YJR044C YJR098CP47139 656 aa4.42□□□□□ -1.7
VPS55YJR044C UBP2Q01476 1272 aa4.41□□□□□ -1.7
VPS55YJR044C RTT106P40161 455 aa4.4□□□□□ -1.71
VPS55YJR044C ROG3P43602 733 aa4.4□□□□□ -1.71
VPS55YJR044C ATF2P53296 535 aa4.4□□□□□ -1.71
VPS55YJR044C RSC30P38781 883 aa4.39□□□□□ -1.71
VPS55YJR044C CCP1P00431 361 aa4.38□□□□□ -1.71
VPS55YJR044C KTR1P27810 393 aaKnown RBP4.38□□□□□ -1.71
VPS55YJR044C GLC3P32775 704 aa4.38□□□□□ -1.71
VPS55YJR044C EMW1P42842 904 aaKnown RBP4.38□□□□□ -1.71
VPS55YJR044C PKH3Q03306 898 aaPredicted RBP4.38□□□□□ -1.71
VPS55YJR044C TY1A-MR1Q04215 440 aa4.38□□□□□ -1.71
VPS55YJR044C OSH7P38755 437 aa4.37□□□□□ -1.71
VPS55YJR044C DFG5Q05031 458 aa4.37□□□□□ -1.71
VPS55YJR044C YPR204WQ08995 1032 aa4.36□□□□□ -1.71
VPS55YJR044C ARG8P18544 423 aa4.35□□□□□ -1.71
VPS55YJR044C MKS1P34072 584 aa4.35□□□□□ -1.71
VPS55YJR044C MDJ1P35191 511 aa4.35□□□□□ -1.71
VPS55YJR044C FIG4P42837 879 aa4.35□□□□□ -1.71
VPS55YJR044C ICP55P40051 511 aa4.34□□□□□ -1.71
VPS55YJR044C LSB3P43603 459 aaKnown RBP4.34□□□□□ -1.71
VPS55YJR044C NAM8Q00539 523 aaKnown RBP4.33□□□□□ -1.72
VPS55YJR044C PUS1Q12211 544 aaKnown RBP4.33□□□□□ -1.72
VPS55YJR044C DPH6Q12429 685 aa4.33□□□□□ -1.72
VPS55YJR044C YNR021WP53723 404 aaKnown RBP4.31□□□□□ -1.72
VPS55YJR044C CDC19P00549 500 aaKnown RBP4.3□□□□□ -1.72
VPS55YJR044C JJJ3P47138 172 aa4.3□□□□□ -1.72
VPS55YJR044C LYS5P50113 272 aa4.3□□□□□ -1.72
VPS55YJR044C BDS1Q08347 646 aa4.3□□□□□ -1.72
VPS55YJR044C TEC1P18412 486 aa4.28□□□□□ -1.72
VPS55YJR044C FBP26P32604 452 aa4.28□□□□□ -1.72
VPS55YJR044C NSG2P53898 299 aa4.28□□□□□ -1.72
VPS55YJR044C YPR084WQ06821 456 aa4.28□□□□□ -1.72
VPS55YJR044C RAD59Q12223 238 aa4.28□□□□□ -1.72
VPS55YJR044C PHM7Q12252 991 aa4.28□□□□□ -1.72
VPS55YJR044C CSN12P47130 423 aa4.27□□□□□ -1.73
VPS55YJR044C STE6P12866 1290 aa4.26□□□□□ -1.73
VPS55YJR044C CUZ1P53899 274 aa4.26□□□□□ -1.73
VPS55YJR044C THI72Q08579 599 aa4.26□□□□□ -1.73
VPS55YJR044C YFL066CP43538 392 aa4.24□□□□□ -1.73
VPS55YJR044C CEM1P39525 442 aa4.22□□□□□ -1.73
VPS55YJR044C ISU1Q03020 165 aa4.22□□□□□ -1.73
VPS55YJR044C ATG20Q07528 640 aa4.22□□□□□ -1.73
VPS55YJR044C AIM7Q12156 149 aa4.22□□□□□ -1.73
VPS55YJR044C AI1P03875 834 aa4.21□□□□□ -1.74
VPS55YJR044C VTC4P47075 721 aa4.21□□□□□ -1.74
VPS55YJR044C GUT2P32191 649 aa4.2□□□□□ -1.74
VPS55YJR044C DAL1P32375 460 aa4.2□□□□□ -1.74
VPS55YJR044C CCT8P47079 568 aaKnown RBP4.2□□□□□ -1.74
VPS55YJR044C NRD1P53617 575 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74 RIP-Chip
VPS55YJR044C MAK16P10962 306 aaPredicted RBP4.19□□□□□ -1.74
VPS55YJR044C DLD3P39976 496 aaKnown RBP4.19□□□□□ -1.74
VPS55YJR044C SBE2P42223 864 aaKnown RBP4.19□□□□□ -1.74
VPS55YJR044C YMR265CQ03508 461 aaKnown RBP4.18□□□□□ -1.74
VPS55YJR044C SYT1Q06836 1226 aa4.17□□□□□ -1.74
VPS55YJR044C TY1A-DR3Q12441 440 aa4.17□□□□□ -1.74
VPS55YJR044C YPR053CQ6Q5F3 151 aa4.17□□□□□ -1.74
VPS55YJR044C SSN3P39073 555 aa4.16□□□□□ -1.74
VPS55YJR044C UBP15P50101 1230 aa4.16□□□□□ -1.74
VPS55YJR044C STE20Q03497 939 aaKnown RBP4.16□□□□□ -1.74
VPS55YJR044C TDA6Q06466 467 aa4.16□□□□□ -1.74
VPS55YJR044C FRA1Q07825 749 aa4.16□□□□□ -1.74
VPS55YJR044C WTM2Q12206 467 aa4.16□□□□□ -1.74
VPS55YJR044C DIT1P21623 536 aa4.15□□□□□ -1.75
VPS55YJR044C ISF1P32488 338 aa4.15□□□□□ -1.75
VPS55YJR044C SLA1P32790 1244 aa4.15□□□□□ -1.75
VPS55YJR044C KRE33P53914 1056 aaKnown RBP4.15□□□□□ -1.75
VPS55YJR044C ADE12P80210 433 aaKnown RBP4.15□□□□□ -1.75
VPS55YJR044C DAT1P13483 248 aaKnown RBP4.14□□□□□ -1.75
VPS55YJR044C ISR1Q06098 443 aaKnown RBP4.14□□□□□ -1.75
VPS55YJR044C UTP7P40055 554 aaKnown RBP4.13□□□□□ -1.75
VPS55YJR044C SBP1P10080 294 aaKnown RBP4.12□□□□□ -1.75
VPS55YJR044C UTR2P32623 467 aa4.12□□□□□ -1.75
VPS55YJR044C EMP47P43555 445 aa4.12□□□□□ -1.75
VPS55YJR044C MSN5P52918 1224 aa4.12□□□□□ -1.75
VPS55YJR044C NAF1P53919 492 aaKnown RBP4.12□□□□□ -1.75
VPS55YJR044C RPP2BP02400 110 aaKnown RBP4.11□□□□□ -1.75
VPS55YJR044C SSA2P10592 639 aaKnown RBP4.11□□□□□ -1.75
VPS55YJR044C AHP1P38013 176 aaKnown RBP4.11□□□□□ -1.75
VPS55YJR044C SKN7P38889 622 aa4.11□□□□□ -1.75
VPS55YJR044C HAL5P38970 855 aaKnown RBP4.11□□□□□ -1.75
VPS55YJR044C YMR187CQ03236 431 aa4.11□□□□□ -1.75
VPS55YJR044C YDR461C-AQ2V2P7 80 aa4.11□□□□□ -1.75
VPS55YJR044C YNR014WP53719 212 aa4.1□□□□□ -1.75
VPS55YJR044C SPT2P06843 333 aaPredicted RBP4.09□□□□□ -1.75
VPS55YJR044C KIN1P13185 1064 aa4.09□□□□□ -1.75
VPS55YJR044C APL6P46682 809 aa4.09□□□□□ -1.75
VPS55YJR044C MCM16Q12262 181 aa4.09□□□□□ -1.75
VPS55YJR044C YCK2P23292 546 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms