RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W MEC3Q02574 474 aa7.75□□□□□ -1.17
GEF1YJR040W AKL1P38080 1108 aaKnown RBP7.74□□□□□ -1.17
GEF1YJR040W RRP46P53256 223 aaPredicted RBP7.74□□□□□ -1.17
GEF1YJR040W DIP2Q12220 943 aaPredicted RBP7.74□□□□□ -1.17
GEF1YJR040W DSD1P53095 428 aa7.74□□□□□ -1.17
GEF1YJR040W YRB30P53107 440 aaPredicted RBP7.74□□□□□ -1.17
GEF1YJR040W YGR130CP53278 816 aa7.73□□□□□ -1.17
GEF1YJR040W PRD1P25375 712 aa7.72□□□□□ -1.17
GEF1YJR040W SLN1P39928 1220 aaPredicted RBP7.72□□□□□ -1.17
GEF1YJR040W DJP1P40564 432 aa7.72□□□□□ -1.17
GEF1YJR040W RCR1P38212 213 aa7.72□□□□□ -1.17
GEF1YJR040W YIR014WP40570 242 aa7.72□□□□□ -1.17
GEF1YJR040W DAL5P15365 543 aa7.71□□□□□ -1.18
GEF1YJR040W CWC22P53333 577 aaKnown RBP7.71□□□□□ -1.18
GEF1YJR040W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
GEF1YJR040W RAD2P07276 1031 aa7.7□□□□□ -1.18
GEF1YJR040W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
GEF1YJR040W SAP155P43612 1002 aa7.7□□□□□ -1.18
GEF1YJR040W YRF1-3P0CX14 1859 aa7.7□□□□□ -1.18
GEF1YJR040W YRF1-7P0CX15 1859 aa7.7□□□□□ -1.18
GEF1YJR040W YRF1-6P53819 1859 aa7.7□□□□□ -1.18
GEF1YJR040W YNL050CP53952 270 aa7.7□□□□□ -1.18
GEF1YJR040W AOS1Q06624 347 aa7.7□□□□□ -1.18
GEF1YJR040W YKL133CP36066 463 aa7.69□□□□□ -1.18
GEF1YJR040W TPD3P31383 635 aa7.69□□□□□ -1.18
GEF1YJR040W SPT21P35209 758 aa7.69□□□□□ -1.18
GEF1YJR040W MAM1P40065 302 aa7.68□□□□□ -1.18
GEF1YJR040W CTR9P89105 1077 aa7.68□□□□□ -1.18
GEF1YJR040W LYS2P07702 1392 aa7.68□□□□□ -1.18
GEF1YJR040W HSP104P31539 908 aaKnown RBP7.68□□□□□ -1.18
GEF1YJR040W NTH2P35172 780 aa7.68□□□□□ -1.18
GEF1YJR040W YMR074CQ04773 145 aa7.67□□□□□ -1.18
GEF1YJR040W THI22Q06490 572 aa7.67□□□□□ -1.18
GEF1YJR040W INP54Q08227 384 aaKnown RBP7.67□□□□□ -1.18
GEF1YJR040W RPS0BP46654 252 aaKnown RBP7.67□□□□□ -1.18
GEF1YJR040W PCT1P13259 424 aa7.66□□□□□ -1.18
GEF1YJR040W UGA3P26370 528 aa7.66□□□□□ -1.18
GEF1YJR040W YIL092WP40497 633 aa7.66□□□□□ -1.18
GEF1YJR040W NUP145P49687 1317 aa7.65□□□□□ -1.18
GEF1YJR040W DOT5P40553 215 aa7.65□□□□□ -1.18
GEF1YJR040W POL32P47110 350 aa7.65□□□□□ -1.18
GEF1YJR040W KCC4P25389 1037 aa7.64□□□□□ -1.19
GEF1YJR040W ZDS1P50111 915 aaKnown RBP7.64□□□□□ -1.19
GEF1YJR040W HEF3P53978 1044 aaKnown RBP7.64□□□□□ -1.19
GEF1YJR040W ADE16P54113 591 aaKnown RBP7.64□□□□□ -1.19
GEF1YJR040W FOX2Q02207 900 aaKnown RBP7.64□□□□□ -1.19
GEF1YJR040W NSE3Q05541 303 aa7.64□□□□□ -1.19
GEF1YJR040W ATG13Q06628 738 aa7.64□□□□□ -1.19
GEF1YJR040W GLN1P32288 370 aaKnown RBP7.63□□□□□ -1.19
GEF1YJR040W YPP1P46951 817 aa7.63□□□□□ -1.19
GEF1YJR040W LAM6Q08001 693 aa7.63□□□□□ -1.19
GEF1YJR040W GYP7P48365 746 aa7.63□□□□□ -1.19
GEF1YJR040W PRP40P33203 583 aaKnown RBP7.62□□□□□ -1.19
GEF1YJR040W PUF6Q04373 656 aaKnown RBP7.62□□□□□ -1.19
GEF1YJR040W RLF2Q12495 606 aa7.62□□□□□ -1.19
GEF1YJR040W OSM1P21375 501 aaKnown RBP7.62□□□□□ -1.19
GEF1YJR040W UBP1P25037 809 aa7.62□□□□□ -1.19
GEF1YJR040W FRK1Q03002 865 aaPredicted RBP7.62□□□□□ -1.19
GEF1YJR040W RTT109Q07794 436 aa7.62□□□□□ -1.19
GEF1YJR040W NOP58Q12499 511 aaKnown RBP7.62□□□□□ -1.19
GEF1YJR040W NOP53Q12080 455 aaKnown RBP7.61□□□□□ -1.19
GEF1YJR040W MAK21Q12176 1025 aaKnown RBP7.61□□□□□ -1.19
GEF1YJR040W COBP00163 385 aa7.61□□□□□ -1.19
GEF1YJR040W BUD27P43573 796 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
GEF1YJR040W NOT3P06102 836 aaKnown RBP7.6□□□□□ -1.19
GEF1YJR040W GRX1P25373 110 aaKnown RBP7.6□□□□□ -1.19
GEF1YJR040W YKR075CP36155 307 aa7.6□□□□□ -1.19
GEF1YJR040W MSP1P28737 362 aa7.6□□□□□ -1.19
GEF1YJR040W KNS1P32350 737 aaPredicted RBP7.6□□□□□ -1.19
GEF1YJR040W YJL181WP46987 611 aa7.6□□□□□ -1.19
GEF1YJR040W MDG1P53885 366 aa7.59□□□□□ -1.19
GEF1YJR040W VPS24P36095 224 aaKnown RBP7.58□□□□□ -1.2
GEF1YJR040W YBP2P53169 641 aa7.58□□□□□ -1.2
GEF1YJR040W RMT2Q03305 412 aa7.58□□□□□ -1.2
GEF1YJR040W ENV11P53246 860 aa7.58□□□□□ -1.2
GEF1YJR040W ARL1P38116 183 aaKnown RBP7.57□□□□□ -1.2
GEF1YJR040W RAD26P40352 1085 aa7.57□□□□□ -1.2
GEF1YJR040W RRT14P40470 206 aa7.57□□□□□ -1.2
GEF1YJR040W RPN11P43588 306 aaKnown RBP7.57□□□□□ -1.2
GEF1YJR040W RIM15P43565 1770 aa7.57□□□□□ -1.2
GEF1YJR040W BUD31P25337 157 aaPredicted RBP7.56□□□□□ -1.2
GEF1YJR040W BMS1Q08965 1183 aaKnown RBP7.56□□□□□ -1.2
GEF1YJR040W RNA1P11745 407 aaKnown RBP7.56□□□□□ -1.2
GEF1YJR040W NUG1P40010 520 aaKnown RBP7.56□□□□□ -1.2
GEF1YJR040W COQ4O13525 335 aa7.55□□□□□ -1.2
GEF1YJR040W MSB4Q12317 492 aa7.55□□□□□ -1.2
GEF1YJR040W RAD4P14736 754 aa7.55□□□□□ -1.2
GEF1YJR040W GTT3P39996 337 aa7.55□□□□□ -1.2
GEF1YJR040W SRT1Q03175 343 aa7.55□□□□□ -1.2
GEF1YJR040W YOL057WQ08225 711 aa7.55□□□□□ -1.2
GEF1YJR040W SSP2Q08646 371 aa7.55□□□□□ -1.2
GEF1YJR040W ALE1Q08548 619 aa7.54□□□□□ -1.2
GEF1YJR040W TRP5P00931 707 aaKnown RBP7.53□□□□□ -1.2
GEF1YJR040W FPR4Q06205 392 aaPredicted RBP7.53□□□□□ -1.2
GEF1YJR040W NPR2P39923 615 aa7.53□□□□□ -1.2
GEF1YJR040W PHM7Q12252 991 aa7.53□□□□□ -1.2
GEF1YJR040W PRI1P10363 409 aa7.51□□□□□ -1.21
GEF1YJR040W ILV3P39522 585 aaKnown RBP7.51□□□□□ -1.21
GEF1YJR040W DNM1P54861 757 aa7.51□□□□□ -1.21
GEF1YJR040W BDF1P35817 686 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms