RNA–Protein interactions for RNA: YIR028W

DAL4, Transcript of Allantoin permease, yeast

Gene DAL4, Length 1,908 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DAL4	YIR028W	RUD3	Q12234	484 aa	Known RBP	7.51	□□□□□ -1.21
DAL4	YIR028W	MPH3	P0CE00	602 aa		7.5	□□□□□ -1.21
DAL4	YIR028W	AVO1	Q08236	1176 aa		7.5	□□□□□ -1.21
DAL4	YIR028W	RPL17A	P05740	184 aa	Known RBP	7.5	□□□□□ -1.21
DAL4	YIR028W	UBP1	P25037	809 aa		7.5	□□□□□ -1.21
DAL4	YIR028W	TFG1	P41895	735 aa	Predicted RBP	7.5	□□□□□ -1.21
DAL4	YIR028W	CCM1	P48237	864 aa	Predicted RBP	7.5	□□□□□ -1.21
DAL4	YIR028W	NSE3	Q05541	303 aa		7.5	□□□□□ -1.21
DAL4	YIR028W	NOP14	Q99207	810 aa	Known RBP	7.5	□□□□□ -1.21
DAL4	YIR028W	SAS3	P34218	831 aa		7.49	□□□□□ -1.21
DAL4	YIR028W	PCL8	Q08966	492 aa		7.49	□□□□□ -1.21
DAL4	YIR028W	ALD2	P47771	506 aa		7.48	□□□□□ -1.21
DAL4	YIR028W	GYP7	P48365	746 aa		7.48	□□□□□ -1.21
DAL4	YIR028W	TIM11	P81449	96 aa	Predicted RBP	7.48	□□□□□ -1.21
DAL4	YIR028W	ERV41	Q04651	352 aa		7.48	□□□□□ -1.21
DAL4	YIR028W	LSP1	Q12230	341 aa	Known RBP	7.48	□□□□□ -1.21
DAL4	YIR028W	CTR9	P89105	1077 aa		7.48	□□□□□ -1.21
DAL4	YIR028W	COG8	Q04632	607 aa		7.48	□□□□□ -1.21
DAL4	YIR028W	ARC19	P33204	171 aa	Known RBP	7.47	□□□□□ -1.21
DAL4	YIR028W	RPC37	P36121	282 aa		7.47	□□□□□ -1.21
DAL4	YIR028W	OPY1	P38271	328 aa		7.47	□□□□□ -1.21
DAL4	YIR028W	HUL5	P53119	910 aa		7.47	□□□□□ -1.21
DAL4	YIR028W	OYE2	Q03558	400 aa	Known RBP	7.47	□□□□□ -1.21
DAL4	YIR028W	RTG2	P32608	588 aa	Known RBP	7.46	□□□□□ -1.21
DAL4	YIR028W	STM1	P39015	273 aa	Known RBP	7.46	□□□□□ -1.21
DAL4	YIR028W	PUF6	Q04373	656 aa	Known RBP	7.46	□□□□□ -1.21
DAL4	YIR028W	ITT1	Q04638	464 aa		7.46	□□□□□ -1.21
DAL4	YIR028W	RRP9	Q06506	573 aa	Known RBP	7.46	□□□□□ -1.21
DAL4	YIR028W	APC2	Q12440	853 aa		7.46	□□□□□ -1.21
DAL4	YIR028W	MAK16	P10962	306 aa	Predicted RBP	7.46	□□□□□ -1.22
DAL4	YIR028W	YEF3	P16521	1044 aa	Known RBP	7.46	□□□□□ -1.22
DAL4	YIR028W	PPG1	P32838	368 aa		7.46	□□□□□ -1.22
DAL4	YIR028W	KDX1	P36005	433 aa		7.46	□□□□□ -1.22
DAL4	YIR028W	VTI1	Q04338	217 aa		7.46	□□□□□ -1.22
DAL4	YIR028W	CLP1	Q08685	445 aa	Predicted RBP	7.46	□□□□□ -1.22
DAL4	YIR028W	SVL3	Q03088	825 aa	Known RBP	7.45	□□□□□ -1.22
DAL4	YIR028W	SIT4	P20604	311 aa		7.44	□□□□□ -1.22
DAL4	YIR028W	RTT106	P40161	455 aa		7.44	□□□□□ -1.22
DAL4	YIR028W	OCA1	P50946	238 aa	Predicted RBP	7.44	□□□□□ -1.22
DAL4	YIR028W	SEN54	Q02825	467 aa	Predicted RBP	7.44	□□□□□ -1.22
DAL4	YIR028W	TRX2	P22803	104 aa	Known RBP	7.43	□□□□□ -1.22
DAL4	YIR028W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.43	□□□□□ -1.22	not detected
DAL4	YIR028W	NPL4	P33755	580 aa		7.43	□□□□□ -1.22
DAL4	YIR028W	RPL17B	P46990	184 aa	Known RBP	7.43	□□□□□ -1.22
DAL4	YIR028W	TIM54	P47045	478 aa		7.43	□□□□□ -1.22
DAL4	YIR028W	JJJ1	P53863	590 aa		7.43	□□□□□ -1.22
DAL4	YIR028W	DBP10	Q12389	995 aa	Known RBP	7.43	□□□□□ -1.22
DAL4	YIR028W	UGA3	P26370	528 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	GCD6	P32501	712 aa	Known RBP	7.42	□□□□□ -1.22
DAL4	YIR028W	SPO71	Q03868	1245 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	ARR1	Q06596	294 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	THR4	P16120	514 aa	Known RBP	7.42	□□□□□ -1.22
DAL4	YIR028W	NIP100	P33420	868 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	ESL2	P36168	1195 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	MTC5	Q03897	1148 aa		7.42	□□□□□ -1.22
DAL4	YIR028W	SWI6	P09959	803 aa		7.41	□□□□□ -1.22
DAL4	YIR028W	VMA1	P17255	1071 aa	Known RBP	7.41	□□□□□ -1.22
DAL4	YIR028W	PHO87	P25360	923 aa		7.41	□□□□□ -1.22
DAL4	YIR028W	VPS24	P36095	224 aa	Known RBP	7.41	□□□□□ -1.22
DAL4	YIR028W	FUI1	P38196	639 aa		7.41	□□□□□ -1.22
DAL4	YIR028W	SXM1	Q04175	944 aa	Known RBP	7.41	□□□□□ -1.22
DAL4	YIR028W	SRP54	P20424	541 aa	Known RBP	7.4	□□□□□ -1.22
DAL4	YIR028W	ANP1	P32629	500 aa		7.4	□□□□□ -1.22
DAL4	YIR028W	PAF1	P38351	445 aa		7.4	□□□□□ -1.22
DAL4	YIR028W	BDP1	P46678	594 aa		7.4	□□□□□ -1.22
DAL4	YIR028W	SMC3	P47037	1230 aa		7.4	□□□□□ -1.22
DAL4	YIR028W	REX2	P54964	269 aa	Known RBP	7.4	□□□□□ -1.22
DAL4	YIR028W	TRS33	Q99394	268 aa		7.4	□□□□□ -1.22
DAL4	YIR028W	UBP12	P39538	1254 aa		7.4	□□□□□ -1.23
DAL4	YIR028W	IRC3	Q06683	689 aa		7.4	□□□□□ -1.23
DAL4	YIR028W	THS1	P04801	734 aa	Known RBP	7.39	□□□□□ -1.23
DAL4	YIR028W	DPB3	P27344	201 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	PEX21	P50091	288 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	NDL1	Q06568	189 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	GRC3	Q07845	632 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	HMI1	Q12039	706 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	SEC23	P15303	768 aa	Known RBP	7.39	□□□□□ -1.23
DAL4	YIR028W	PHO84	P25297	587 aa	Known RBP	7.39	□□□□□ -1.23
DAL4	YIR028W	EFB1	P32471	206 aa	Known RBP	7.39	□□□□□ -1.23
DAL4	YIR028W	GRX4	P32642	244 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	7.39	□□□□□ -1.23	not detected
DAL4	YIR028W	TAP42	Q04372	366 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.39	□□□□□ -1.23	not detected
DAL4	YIR028W	YOL098C	Q12496	1037 aa		7.39	□□□□□ -1.23
DAL4	YIR028W	APN1	P22936	367 aa		7.38	□□□□□ -1.23
DAL4	YIR028W	GRX7	P38068	203 aa		7.38	□□□□□ -1.23
DAL4	YIR028W	ETP1	P38748	585 aa	Known RBP	7.38	□□□□□ -1.23
DAL4	YIR028W	LAM1	P38851	1228 aa		7.38	□□□□□ -1.23
DAL4	YIR028W	YTA6	P40328	754 aa		7.38	□□□□□ -1.23
DAL4	YIR028W	ATG26	Q06321	1198 aa		7.38	□□□□□ -1.23
DAL4	YIR028W	NAT1	P12945	854 aa	Known RBP	7.37	□□□□□ -1.23
DAL4	YIR028W	YKR023W	P36119	530 aa	Known RBP	7.37	□□□□□ -1.23
DAL4	YIR028W	ABZ1	P37254	787 aa	Predicted RBP	7.37	□□□□□ -1.23
DAL4	YIR028W	RXT2	P38255	430 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	VPS29	P38759	282 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	HST2	P53686	357 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	DSL1	P53847	754 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	ARV1	Q06541	321 aa		7.37	□□□□□ -1.23
DAL4	YIR028W	ISA1	Q07821	250 aa	Predicted RBP	7.37	□□□□□ -1.23
DAL4	YIR028W	YRM1	Q12340	786 aa		7.37	□□□□□ -1.23

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms