RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C ENV9Q08651 330 aa5.65□□□□□ -1.5
MSM1YGR171C GUT2P32191 649 aa5.65□□□□□ -1.51
MSM1YGR171C RPL34AP87262 121 aaPredicted RBP5.65□□□□□ -1.51
MSM1YGR171C NOB1Q08444 459 aaKnown RBP5.65□□□□□ -1.51
MSM1YGR171C FRA1Q07825 749 aa5.64□□□□□ -1.51
MSM1YGR171C RDS2P19541 446 aaKnown RBP5.63□□□□□ -1.51
MSM1YGR171C PUP1P25043 261 aa5.63□□□□□ -1.51
MSM1YGR171C MRF1P30775 413 aaPredicted RBP5.63□□□□□ -1.51
MSM1YGR171C TPD3P31383 635 aa5.63□□□□□ -1.51
MSM1YGR171C TGL4P36165 910 aa5.63□□□□□ -1.51
MSM1YGR171C RRD1P40454 393 aaKnown RBP5.63□□□□□ -1.51
MSM1YGR171C MRX12P47084 519 aa5.63□□□□□ -1.51
MSM1YGR171C PEP12P32854 288 aa5.62□□□□□ -1.51
MSM1YGR171C ATG3P40344 310 aa5.62□□□□□ -1.51
MSM1YGR171C YPR084WQ06821 456 aa5.62□□□□□ -1.51
MSM1YGR171C MOD5P07884 428 aa5.62□□□□□ -1.51
MSM1YGR171C VAC17P25591 423 aa5.62□□□□□ -1.51
MSM1YGR171C VRP1P37370 817 aa5.61□□□□□ -1.51
MSM1YGR171C KTR7P40504 517 aa5.61□□□□□ -1.51
MSM1YGR171C SLX8P40072 274 aa5.6□□□□□ -1.51
MSM1YGR171C YML083CQ04526 418 aa5.6□□□□□ -1.51
MSM1YGR171C ECM23Q02710 187 aa5.6□□□□□ -1.51
MSM1YGR171C KIP2P28743 706 aa5.58□□□□□ -1.52
MSM1YGR171C UTP13Q05946 817 aaKnown RBP5.58□□□□□ -1.52
MSM1YGR171C SOH1P38633 127 aa5.57□□□□□ -1.52
MSM1YGR171C APL6P46682 809 aa5.57□□□□□ -1.52
MSM1YGR171C GAL2P13181 574 aa5.57□□□□□ -1.52
MSM1YGR171C YML020WQ03722 664 aa5.57□□□□□ -1.52
MSM1YGR171C CDC3P32457 520 aaKnown RBP5.56□□□□□ -1.52
MSM1YGR171C BDP1P46678 594 aa5.56□□□□□ -1.52
MSM1YGR171C IXR1P33417 597 aa5.55□□□□□ -1.52
MSM1YGR171C SDH2P21801 266 aa5.54□□□□□ -1.52
MSM1YGR171C UBX7P38349 436 aa5.54□□□□□ -1.52
MSM1YGR171C SYH1Q02875 849 aaKnown RBP5.54□□□□□ -1.52
MSM1YGR171C PUS5Q06244 254 aa5.54□□□□□ -1.52
MSM1YGR171C PHO87P25360 923 aa5.54□□□□□ -1.52
MSM1YGR171C BCK2P33306 851 aa5.54□□□□□ -1.52
MSM1YGR171C FRK1Q03002 865 aaPredicted RBP5.54□□□□□ -1.52
MSM1YGR171C ITT1Q04638 464 aa5.54□□□□□ -1.52
MSM1YGR171C ISR1Q06098 443 aaKnown RBP5.54□□□□□ -1.52
MSM1YGR171C HAP4P14064 554 aa5.53□□□□□ -1.52
MSM1YGR171C ATG20Q07528 640 aa5.53□□□□□ -1.52
MSM1YGR171C YEL077CQ3E7X8 1277 aa5.53□□□□□ -1.52
MSM1YGR171C CST6P40535 587 aa5.52□□□□□ -1.53
MSM1YGR171C TSC13Q99190 310 aa5.52□□□□□ -1.53
MSM1YGR171C RGA2Q06407 1009 aa5.51□□□□□ -1.53
MSM1YGR171C NOP8Q08287 484 aaPredicted RBP5.51□□□□□ -1.53
MSM1YGR171C HAL5P38970 855 aaKnown RBP5.51□□□□□ -1.53
MSM1YGR171C ACS2P52910 683 aaKnown RBP5.51□□□□□ -1.53
MSM1YGR171C APP1P53933 587 aa5.51□□□□□ -1.53
MSM1YGR171C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
MSM1YGR171C MIP1P15801 1254 aa5.5□□□□□ -1.53
MSM1YGR171C EMW1P42842 904 aaKnown RBP5.5□□□□□ -1.53
MSM1YGR171C PDI1P17967 522 aaKnown RBP5.49□□□□□ -1.53
MSM1YGR171C XDJ1P39102 459 aa5.49□□□□□ -1.53
MSM1YGR171C YFL034WP43564 1073 aa5.49□□□□□ -1.53
MSM1YGR171C AIM9P40053 627 aaKnown RBP5.48□□□□□ -1.53
MSM1YGR171C ROM1P53046 1155 aa5.48□□□□□ -1.53
MSM1YGR171C HDA3Q06623 655 aa5.48□□□□□ -1.53
MSM1YGR171C GAS4Q08271 471 aa5.48□□□□□ -1.53
MSM1YGR171C HAT1Q12341 374 aa5.48□□□□□ -1.53
MSM1YGR171C PUF6Q04373 656 aaKnown RBP5.48□□□□□ -1.53
MSM1YGR171C SLD2P34252 453 aa5.47□□□□□ -1.53
MSM1YGR171C ISU1Q03020 165 aa5.46□□□□□ -1.54
MSM1YGR171C AMS1P22855 1083 aa5.45□□□□□ -1.54
MSM1YGR171C FBP26P32604 452 aa5.45□□□□□ -1.54
MSM1YGR171C MKS1P34072 584 aa5.45□□□□□ -1.54
MSM1YGR171C SSF1P38789 453 aaPredicted RBP5.45□□□□□ -1.54
MSM1YGR171C CWC15Q03772 175 aaKnown RBP5.45□□□□□ -1.54
MSM1YGR171C HED1Q03937 162 aa5.45□□□□□ -1.54
MSM1YGR171C VAN1P23642 535 aa5.45□□□□□ -1.54
MSM1YGR171C MRT4P33201 236 aaKnown RBP5.45□□□□□ -1.54
MSM1YGR171C UTR2P32623 467 aa5.44□□□□□ -1.54
MSM1YGR171C NTH2P35172 780 aa5.44□□□□□ -1.54
MSM1YGR171C TPS3P38426 1054 aaKnown RBP5.43□□□□□ -1.54
MSM1YGR171C PUN1Q06991 263 aa5.43□□□□□ -1.54
MSM1YGR171C TRS33Q99394 268 aa5.43□□□□□ -1.54
MSM1YGR171C RPP2BP02400 110 aaKnown RBP5.43□□□□□ -1.54
MSM1YGR171C SPT2P06843 333 aaPredicted RBP5.43□□□□□ -1.54
MSM1YGR171C TBS1P38114 1094 aa5.43□□□□□ -1.54
MSM1YGR171C KAR5Q04746 504 aa5.43□□□□□ -1.54
MSM1YGR171C PNP1Q05788 311 aa5.43□□□□□ -1.54
MSM1YGR171C RPS6AP0CX37 236 aaKnown RBP5.42□□□□□ -1.54
MSM1YGR171C RPS6BP0CX38 236 aaPredicted RBP5.42□□□□□ -1.54
MSM1YGR171C SRS2P12954 1174 aa5.42□□□□□ -1.54
MSM1YGR171C DAT1P13483 248 aaKnown RBP5.42□□□□□ -1.54
MSM1YGR171C YBL086CP38177 466 aa5.42□□□□□ -1.54
MSM1YGR171C CYT1P07143 309 aa5.41□□□□□ -1.54
MSM1YGR171C SWI5P08153 709 aa5.41□□□□□ -1.54
MSM1YGR171C BDS1Q08347 646 aa5.41□□□□□ -1.54
MSM1YGR171C YBL113CQ7M4S9 792 aa5.41□□□□□ -1.54
MSM1YGR171C STE6P12866 1290 aa5.4□□□□□ -1.54
MSM1YGR171C UBP1P25037 809 aa5.4□□□□□ -1.54
MSM1YGR171C CWH41P53008 833 aa5.4□□□□□ -1.54
MSM1YGR171C DFG5Q05031 458 aa5.4□□□□□ -1.54
MSM1YGR171C FUR4P05316 633 aaKnown RBP5.4□□□□□ -1.55
MSM1YGR171C RTT106P40161 455 aa5.39□□□□□ -1.55
MSM1YGR171C ALD4P46367 519 aaKnown RBP5.39□□□□□ -1.55
MSM1YGR171C RAS1P01119 309 aa5.38□□□□□ -1.55
MSM1YGR171C ERP5P38819 212 aa5.38□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 41.1 ms