RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W NAP1P25293 417 aaKnown RBP6.91□□□□□ -1.3
CDC43YGL155W ELP4Q02884 456 aaKnown RBP6.91□□□□□ -1.3
CDC43YGL155W MLP1Q02455 1875 aaKnown RBP6.9□□□□□ -1.3
CDC43YGL155W NUP192P47054 1683 aa6.89□□□□□ -1.31
CDC43YGL155W IPL1P38991 367 aa6.88□□□□□ -1.31
CDC43YGL155W IOC4Q04213 475 aa6.88□□□□□ -1.31
CDC43YGL155W CDC45Q08032 650 aa6.88□□□□□ -1.31
CDC43YGL155W MPH3P0CE00 602 aa6.87□□□□□ -1.31
CDC43YGL155W VPS27P40343 622 aaKnown RBP6.87□□□□□ -1.31
CDC43YGL155W ALD4P46367 519 aaKnown RBP6.87□□□□□ -1.31
CDC43YGL155W AI4P03878 556 aa6.86□□□□□ -1.31
CDC43YGL155W FPR3P38911 411 aaKnown RBP6.85□□□□□ -1.31
CDC43YGL155W CHZ1P40019 153 aaPredicted RBP6.85□□□□□ -1.31
CDC43YGL155W VPS70P47161 811 aa6.85□□□□□ -1.31
CDC43YGL155W YRB30P53107 440 aaPredicted RBP6.85□□□□□ -1.31
CDC43YGL155W TAF8Q03750 510 aa6.85□□□□□ -1.31
CDC43YGL155W PML39Q03760 334 aa6.85□□□□□ -1.31
CDC43YGL155W TYS1P36421 394 aaKnown RBP6.83□□□□□ -1.32
CDC43YGL155W UBP14P38237 781 aaKnown RBP6.83□□□□□ -1.32
CDC43YGL155W YLR326WQ06170 240 aaKnown RBP6.83□□□□□ -1.32
CDC43YGL155W BCK1Q01389 1478 aa6.82□□□□□ -1.32
CDC43YGL155W KEX1P09620 729 aa6.82□□□□□ -1.32
CDC43YGL155W YAP3P38749 330 aa6.82□□□□□ -1.32
CDC43YGL155W VHR2P40041 505 aa6.82□□□□□ -1.32
CDC43YGL155W MID1P41821 548 aa6.82□□□□□ -1.32
CDC43YGL155W ARH1P48360 493 aa6.82□□□□□ -1.32
CDC43YGL155W RAD9P14737 1309 aa6.79□□□□□ -1.32
CDC43YGL155W YDL144CQ07589 356 aa6.79□□□□□ -1.32
CDC43YGL155W RVB2Q12464 471 aaKnown RBP6.79□□□□□ -1.32
CDC43YGL155W HAP1P0CE41 1502 aa6.79□□□□□ -1.32
CDC43YGL155W YDR090CQ03193 310 aa6.78□□□□□ -1.32
CDC43YGL155W ITT1Q04638 464 aa6.78□□□□□ -1.32
CDC43YGL155W CFT1Q06632 1357 aaKnown RBP6.78□□□□□ -1.32
CDC43YGL155W SLI15P38283 698 aa6.77□□□□□ -1.33
CDC43YGL155W MRX12P47084 519 aa6.77□□□□□ -1.33
CDC43YGL155W CAB1Q04430 367 aa6.77□□□□□ -1.33
CDC43YGL155W SNF2P22082 1703 aa6.76□□□□□ -1.33
CDC43YGL155W PCS60P38137 543 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
CDC43YGL155W REF2P42073 533 aaPredicted RBP6.76□□□□□ -1.33
CDC43YGL155W RPC31P17890 251 aa6.75□□□□□ -1.33
CDC43YGL155W TRK1P12685 1235 aa6.74□□□□□ -1.33
CDC43YGL155W BNI1P41832 1953 aa6.73□□□□□ -1.33
CDC43YGL155W YEF3P16521 1044 aaKnown RBP6.73□□□□□ -1.33
CDC43YGL155W FUN12P39730 1002 aaKnown RBP6.73□□□□□ -1.33
CDC43YGL155W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
CDC43YGL155W KAR2P16474 682 aaKnown RBP6.72□□□□□ -1.33
CDC43YGL155W RAD54P32863 898 aa6.72□□□□□ -1.33
CDC43YGL155W SPT23P35210 1082 aa6.72□□□□□ -1.33
CDC43YGL155W PSK1P31374 1356 aa6.71□□□□□ -1.33
CDC43YGL155W RAD2P07276 1031 aa6.71□□□□□ -1.34
CDC43YGL155W PDI1P17967 522 aaKnown RBP6.71□□□□□ -1.34
CDC43YGL155W SUI2P20459 304 aaKnown RBP6.71□□□□□ -1.34
CDC43YGL155W RTR1P40084 226 aaPredicted RBP6.71□□□□□ -1.34
CDC43YGL155W MPP10P47083 593 aaKnown RBP6.71□□□□□ -1.34
CDC43YGL155W TAP42Q04372 366 aa6.71□□□□□ -1.34
CDC43YGL155W MPC54Q08550 464 aa6.71□□□□□ -1.34
CDC43YGL155W YML133CQ03099 1374 aa6.7□□□□□ -1.34
CDC43YGL155W YLL067CQ07888 1374 aa6.7□□□□□ -1.34
CDC43YGL155W YLL066CQ99208 1374 aa6.7□□□□□ -1.34
CDC43YGL155W BUD27P43573 796 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
CDC43YGL155W RTF1P53064 558 aa6.7□□□□□ -1.34
CDC43YGL155W PEX29Q03370 554 aa6.7□□□□□ -1.34
CDC43YGL155W GRX4P32642 244 aa6.69□□□□□ -1.34
CDC43YGL155W CDC73Q06697 393 aa6.69□□□□□ -1.34
CDC43YGL155W RAS1P01119 309 aa6.68□□□□□ -1.34
CDC43YGL155W LEU2P04173 364 aaPredicted RBP6.68□□□□□ -1.34
CDC43YGL155W PAP2P53632 584 aaKnown RBP6.68□□□□□ -1.34
CDC43YGL155W RIA1P53893 1110 aa6.68□□□□□ -1.34
CDC43YGL155W RCM1P53972 490 aa6.68□□□□□ -1.34
CDC43YGL155W DNF3Q12674 1656 aa6.68□□□□□ -1.34
CDC43YGL155W SAP155P43612 1002 aa6.67□□□□□ -1.34
CDC43YGL155W MTR4P47047 1073 aaKnown RBP6.67□□□□□ -1.34
CDC43YGL155W KRE5P22023 1365 aa6.67□□□□□ -1.34
CDC43YGL155W COX6P00427 148 aa6.66□□□□□ -1.34
CDC43YGL155W PBS2P08018 668 aa6.66□□□□□ -1.34
CDC43YGL155W PRD1P25375 712 aa6.66□□□□□ -1.34
CDC43YGL155W EAF7P53911 425 aaKnown RBP6.66□□□□□ -1.34
CDC43YGL155W MAK21Q12176 1025 aaKnown RBP6.66□□□□□ -1.34
CDC43YGL155W USO1P25386 1790 aa6.65□□□□□ -1.34
CDC43YGL155W TPD3P31383 635 aa6.65□□□□□ -1.34
CDC43YGL155W RRP46P53256 223 aaPredicted RBP6.65□□□□□ -1.34
CDC43YGL155W DPL1Q05567 589 aa6.65□□□□□ -1.34
CDC43YGL155W PPH3P32345 308 aa6.64□□□□□ -1.35
CDC43YGL155W IME2P32581 645 aa6.64□□□□□ -1.35
CDC43YGL155W YFR016CP43597 1233 aaKnown RBP6.64□□□□□ -1.35
CDC43YGL155W CPS1P27614 576 aa6.63□□□□□ -1.35
CDC43YGL155W KIC1P38692 1080 aa6.63□□□□□ -1.35
CDC43YGL155W YIR014WP40570 242 aa6.63□□□□□ -1.35
CDC43YGL155W NMA111P53920 997 aa6.63□□□□□ -1.35
CDC43YGL155W YML082WQ04533 649 aaKnown RBP6.63□□□□□ -1.35
CDC43YGL155W YRF1-4O13559 1382 aa6.62□□□□□ -1.35
CDC43YGL155W SIR4P11978 1358 aa6.62□□□□□ -1.35
CDC43YGL155W DSF2P38213 736 aa6.62□□□□□ -1.35
CDC43YGL155W OPY1P38271 328 aa6.62□□□□□ -1.35
CDC43YGL155W ORC6P38826 435 aa6.62□□□□□ -1.35
CDC43YGL155W YIL092WP40497 633 aa6.62□□□□□ -1.35
CDC43YGL155W HAP5Q02516 242 aa6.62□□□□□ -1.35
CDC43YGL155W THI22Q06490 572 aa6.62□□□□□ -1.35
CDC43YGL155W HIM1Q06674 414 aa6.62□□□□□ -1.35
CDC43YGL155W DAL5P15365 543 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms