RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	FPK1	P53739	893 aa		4.79	□□□□□ -1.64
SCW11	YGL028C	TCB1	Q12466	1186 aa		4.79	□□□□□ -1.64
SCW11	YGL028C	DLD1	P32891	587 aa		4.79	□□□□□ -1.64
SCW11	YGL028C	TY1A-MR1	Q04215	440 aa		4.79	□□□□□ -1.64
SCW11	YGL028C	MDJ1	P35191	511 aa		4.77	□□□□□ -1.65
SCW11	YGL028C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	RIP-Chip
SCW11	YGL028C	TRM1	P15565	570 aa	Known RBP	4.76	□□□□□ -1.65
SCW11	YGL028C	YBL086C	P38177	466 aa		4.76	□□□□□ -1.65
SCW11	YGL028C	OSH7	P38755	437 aa		4.75	□□□□□ -1.65
SCW11	YGL028C	LYS5	P50113	272 aa		4.75	□□□□□ -1.65
SCW11	YGL028C	CCP1	P00431	361 aa		4.75	□□□□□ -1.65
SCW11	YGL028C	NUP42	P49686	430 aa	Known RBP	4.74	□□□□□ -1.65
SCW11	YGL028C	VAC17	P25591	423 aa		4.73	□□□□□ -1.65
SCW11	YGL028C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	not detected
SCW11	YGL028C	JJJ3	P47138	172 aa		4.73	□□□□□ -1.65
SCW11	YGL028C	NSG2	P53898	299 aa		4.73	□□□□□ -1.65
SCW11	YGL028C	SCJ1	P25303	377 aa		4.72	□□□□□ -1.65
SCW11	YGL028C	DSF2	P38213	736 aa		4.72	□□□□□ -1.65
SCW11	YGL028C	APP1	P53933	587 aa		4.71	□□□□□ -1.66
SCW11	YGL028C	HST2	P53686	357 aa		4.69	□□□□□ -1.66
SCW11	YGL028C	THI72	Q08579	599 aa		4.68	□□□□□ -1.66
SCW11	YGL028C	DIT2	P21595	489 aa		4.68	□□□□□ -1.66
SCW11	YGL028C	EMW1	P42842	904 aa	Known RBP	4.68	□□□□□ -1.66
SCW11	YGL028C	CCT8	P47079	568 aa	Known RBP	4.68	□□□□□ -1.66
SCW11	YGL028C	ITT1	Q04638	464 aa		4.68	□□□□□ -1.66
SCW11	YGL028C	MMP1	Q12372	583 aa		4.68	□□□□□ -1.66
SCW11	YGL028C	AI1	P03875	834 aa		4.66	□□□□□ -1.66
SCW11	YGL028C	YFL066C	P43538	392 aa		4.65	□□□□□ -1.66
SCW11	YGL028C	NAM8	Q00539	523 aa	Known RBP	4.65	□□□□□ -1.66
SCW11	YGL028C	CDC19	P00549	500 aa	Known RBP	4.64	□□□□□ -1.67
SCW11	YGL028C	MKS1	P34072	584 aa		4.64	□□□□□ -1.67
SCW11	YGL028C	DFG5	Q05031	458 aa		4.64	□□□□□ -1.67
SCW11	YGL028C	ESS1	P22696	170 aa		4.63	□□□□□ -1.67
SCW11	YGL028C	GLN1	P32288	370 aa	Known RBP	4.63	□□□□□ -1.67
SCW11	YGL028C	YPR053C	Q6Q5F3	151 aa		4.62	□□□□□ -1.67
SCW11	YGL028C	SBP1	P10080	294 aa	Known RBP	4.61	□□□□□ -1.67
SCW11	YGL028C	CUZ1	P53899	274 aa		4.61	□□□□□ -1.67
SCW11	YGL028C	YJU3	P28321	313 aa		4.6	□□□□□ -1.67
SCW11	YGL028C	DMA1	P38823	416 aa		4.6	□□□□□ -1.67
SCW11	YGL028C	BDS1	Q08347	646 aa		4.6	□□□□□ -1.67
SCW11	YGL028C	CEM1	P39525	442 aa		4.59	□□□□□ -1.67
SCW11	YGL028C	VTC4	P47075	721 aa		4.57	□□□□□ -1.68
SCW11	YGL028C	SPB4	P25808	606 aa	Predicted RBP	4.57	□□□□□ -1.68
SCW11	YGL028C	RSC30	P38781	883 aa		4.57	□□□□□ -1.68
SCW11	YGL028C	FIG4	P42837	879 aa		4.56	□□□□□ -1.68
SCW11	YGL028C	FBP26	P32604	452 aa		4.55	□□□□□ -1.68
SCW11	YGL028C	ADE12	P80210	433 aa	Known RBP	4.55	□□□□□ -1.68
SCW11	YGL028C	SKN7	P38889	622 aa		4.54	□□□□□ -1.68
SCW11	YGL028C	SBE2	P42223	864 aa	Known RBP	4.54	□□□□□ -1.68
SCW11	YGL028C	TDA6	Q06466	467 aa		4.54	□□□□□ -1.68
SCW11	YGL028C	STE6	P12866	1290 aa		4.54	□□□□□ -1.68
SCW11	YGL028C	SAS10	Q12136	610 aa	Predicted RBP	4.54	□□□□□ -1.68
SCW11	YGL028C	YMR187C	Q03236	431 aa		4.53	□□□□□ -1.68
SCW11	YGL028C	PKH3	Q03306	898 aa	Predicted RBP	4.53	□□□□□ -1.68
SCW11	YGL028C	DAL1	P32375	460 aa		4.52	□□□□□ -1.69
SCW11	YGL028C	ATF2	P53296	535 aa		4.52	□□□□□ -1.69
SCW11	YGL028C	YMR265C	Q03508	461 aa	Known RBP	4.52	□□□□□ -1.69
SCW11	YGL028C	SYT1	Q06836	1226 aa		4.52	□□□□□ -1.69
SCW11	YGL028C	TEC1	P18412	486 aa		4.5	□□□□□ -1.69
SCW11	YGL028C	ARG8	P18544	423 aa		4.5	□□□□□ -1.69
SCW11	YGL028C	DIT1	P21623	536 aa		4.5	□□□□□ -1.69
SCW11	YGL028C	DLD3	P39976	496 aa	Known RBP	4.48	□□□□□ -1.69
SCW11	YGL028C	UBP15	P50101	1230 aa		4.48	□□□□□ -1.69
SCW11	YGL028C	YNR014W	P53719	212 aa		4.48	□□□□□ -1.69
SCW11	YGL028C	KRE33	P53914	1056 aa	Known RBP	4.48	□□□□□ -1.69
SCW11	YGL028C	ISU1	Q03020	165 aa		4.46	□□□□□ -1.69
SCW11	YGL028C	YPR084W	Q06821	456 aa		4.46	□□□□□ -1.69
SCW11	YGL028C	YDR461C-A	Q2V2P7	80 aa		4.46	□□□□□ -1.69
SCW11	YGL028C	KTR1	P27810	393 aa	Known RBP	4.46	□□□□□ -1.7
SCW11	YGL028C	MCX1	P38323	520 aa	Predicted RBP	4.46	□□□□□ -1.7
SCW11	YGL028C	RPP2B	P02400	110 aa	Known RBP	4.44	□□□□□ -1.7
SCW11	YGL028C	YCK2	P23292	546 aa	Known RBP	4.44	□□□□□ -1.7
SCW11	YGL028C	ATG20	Q07528	640 aa		4.43	□□□□□ -1.7
SCW11	YGL028C	GUT2	P32191	649 aa		4.42	□□□□□ -1.7
SCW11	YGL028C	SLA1	P32790	1244 aa		4.42	□□□□□ -1.7
SCW11	YGL028C	MSN5	P52918	1224 aa		4.42	□□□□□ -1.7
SCW11	YGL028C	YDR215C	Q12240	137 aa		4.42	□□□□□ -1.7
SCW11	YGL028C	GLT1	Q12680	2145 aa	Known RBP	4.42	□□□□□ -1.7
SCW11	YGL028C	GLC3	P32775	704 aa		4.41	□□□□□ -1.7
SCW11	YGL028C	AMN1	P38285	549 aa	Predicted RBP	4.41	□□□□□ -1.7
SCW11	YGL028C	SSN3	P39073	555 aa		4.41	□□□□□ -1.7
SCW11	YGL028C	BOI2	P39969	1040 aa		4.41	□□□□□ -1.7
SCW11	YGL028C	RAD59	Q12223	238 aa		4.41	□□□□□ -1.7
SCW11	YGL028C	TY1A-DR3	Q12441	440 aa		4.41	□□□□□ -1.7
SCW11	YGL028C	GPM1	P00950	247 aa	Known RBP	4.39	□□□□□ -1.71
SCW11	YGL028C	AHP1	P38013	176 aa	Known RBP	4.39	□□□□□ -1.71
SCW11	YGL028C	SLN1	P39928	1220 aa	Predicted RBP	4.39	□□□□□ -1.71
SCW11	YGL028C	WTM2	Q12206	467 aa		4.39	□□□□□ -1.71
SCW11	YGL028C	MAC1	P35192	417 aa		4.39	□□□□□ -1.71
SCW11	YGL028C	LSB6	P42951	607 aa		4.39	□□□□□ -1.71
SCW11	YGL028C	YNR021W	P53723	404 aa	Known RBP	4.39	□□□□□ -1.71
SCW11	YGL028C	MCA1	Q08601	432 aa		4.39	□□□□□ -1.71
SCW11	YGL028C	CSN12	P47130	423 aa		4.37	□□□□□ -1.71
SCW11	YGL028C	FPS1	P23900	669 aa		4.36	□□□□□ -1.71
SCW11	YGL028C	MET1	P36150	593 aa		4.36	□□□□□ -1.71
SCW11	YGL028C	TAT1	P38085	619 aa		4.35	□□□□□ -1.71
SCW11	YGL028C	STE20	Q03497	939 aa	Known RBP	4.35	□□□□□ -1.71
SCW11	YGL028C	DAT1	P13483	248 aa	Known RBP	4.35	□□□□□ -1.71
SCW11	YGL028C	MAK16	P10962	306 aa	Predicted RBP	4.34	□□□□□ -1.71
SCW11	YGL028C	FRA1	Q07825	749 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 278.5 ms