RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W ISU2Q12056 156 aa7.37□□□□□ -1.23
RPN12YFR052W HAP1P0CE41 1502 aa7.37□□□□□ -1.23
RPN12YFR052W PDR11P40550 1411 aa7.36□□□□□ -1.23
RPN12YFR052W RAS1P01119 309 aa7.35□□□□□ -1.23
RPN12YFR052W YLR326WQ06170 240 aaKnown RBP7.35□□□□□ -1.23
RPN12YFR052W CDC73Q06697 393 aa7.35□□□□□ -1.23
RPN12YFR052W UBP14P38237 781 aaKnown RBP7.34□□□□□ -1.23
RPN12YFR052W NUP192P47054 1683 aa7.32□□□□□ -1.24
RPN12YFR052W SET1P38827 1080 aaKnown RBP7.32□□□□□ -1.24
RPN12YFR052W PDR1P12383 1068 aa7.28□□□□□ -1.24
RPN12YFR052W PCS60P38137 543 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
RPN12YFR052W SDH2P21801 266 aa7.27□□□□□ -1.25
RPN12YFR052W RGA2Q06407 1009 aa7.27□□□□□ -1.25
RPN12YFR052W VHR2P40041 505 aa7.26□□□□□ -1.25
RPN12YFR052W THI12P42883 340 aa7.25□□□□□ -1.25
RPN12YFR052W THI5P43534 340 aa7.25□□□□□ -1.25
RPN12YFR052W THI11P47183 340 aa7.25□□□□□ -1.25
RPN12YFR052W THI13Q07748 340 aa7.25□□□□□ -1.25
RPN12YFR052W AMS1P22855 1083 aa7.24□□□□□ -1.25
RPN12YFR052W KRE5P22023 1365 aa7.23□□□□□ -1.25
RPN12YFR052W RGA1P39083 1007 aa7.23□□□□□ -1.25
RPN12YFR052W GYP1Q08484 637 aa7.23□□□□□ -1.25
RPN12YFR052W BCK1Q01389 1478 aa7.23□□□□□ -1.25
RPN12YFR052W RAD54P32863 898 aa7.22□□□□□ -1.25
RPN12YFR052W SAS4Q04003 481 aa7.21□□□□□ -1.26
RPN12YFR052W RAV1P47104 1357 aa7.2□□□□□ -1.26
RPN12YFR052W TY4B-HP0C2J7 1802 aa7.2□□□□□ -1.26
RPN12YFR052W TY4B-JP47024 1803 aa7.2□□□□□ -1.26
RPN12YFR052W YDR090CQ03193 310 aa7.2□□□□□ -1.26
RPN12YFR052W YMR196WQ04336 1088 aa7.2□□□□□ -1.26
RPN12YFR052W RIA1P53893 1110 aa7.19□□□□□ -1.26
RPN12YFR052W PAF1P38351 445 aa7.18□□□□□ -1.26
RPN12YFR052W CFT1Q06632 1357 aaKnown RBP7.18□□□□□ -1.26
RPN12YFR052W TRK1P12685 1235 aa7.17□□□□□ -1.26
RPN12YFR052W RAD9P14737 1309 aa7.17□□□□□ -1.26
RPN12YFR052W GAP1P19145 602 aaPredicted RBP7.16□□□□□ -1.26
RPN12YFR052W MRX12P47084 519 aa7.16□□□□□ -1.26
RPN12YFR052W CAB1Q04430 367 aa7.15□□□□□ -1.26
RPN12YFR052W BUD20Q08004 166 aaPredicted RBP7.15□□□□□ -1.26
RPN12YFR052W RTC1Q08281 1341 aa7.15□□□□□ -1.26
RPN12YFR052W RPP1BP10622 106 aaKnown RBP7.14□□□□□ -1.27
RPN12YFR052W NOP7P53261 605 aaKnown RBP7.14□□□□□ -1.27
RPN12YFR052W RRP5Q05022 1729 aaKnown RBP7.14□□□□□ -1.27
RPN12YFR052W YRF1-2P40105 1681 aa7.13□□□□□ -1.27
RPN12YFR052W TY3B-IQ7LHG5 1498 aaKnown RBP7.13□□□□□ -1.27
RPN12YFR052W YNR029CP53729 429 aaKnown RBP7.12□□□□□ -1.27
RPN12YFR052W STR2P47164 639 aa7.11□□□□□ -1.27
RPN12YFR052W ALD4P46367 519 aaKnown RBP7.1□□□□□ -1.27
RPN12YFR052W YRR1Q12172 810 aa7.1□□□□□ -1.27
RPN12YFR052W YEL077CQ3E7X8 1277 aa7.1□□□□□ -1.27
RPN12YFR052W PRT1P06103 763 aaKnown RBP7.08□□□□□ -1.28
RPN12YFR052W TAF5P38129 798 aa7.08□□□□□ -1.28
RPN12YFR052W ISM1P48526 1002 aa7.08□□□□□ -1.28
RPN12YFR052W YPR148CQ06523 435 aa7.08□□□□□ -1.28
RPN12YFR052W CSC1Q06538 782 aa7.07□□□□□ -1.28
RPN12YFR052W TFB4Q12004 338 aa7.07□□□□□ -1.28
RPN12YFR052W YIL177CP40434 1758 aa7.07□□□□□ -1.28
RPN12YFR052W YJL225CP40889 1758 aa7.07□□□□□ -1.28
RPN12YFR052W MRF1P30775 413 aaPredicted RBP7.06□□□□□ -1.28
RPN12YFR052W MLP1Q02455 1875 aaKnown RBP7.05□□□□□ -1.28
RPN12YFR052W KIC1P38692 1080 aa7.04□□□□□ -1.28
RPN12YFR052W ORC6P38826 435 aa7.04□□□□□ -1.28
RPN12YFR052W REF2P42073 533 aaPredicted RBP7.04□□□□□ -1.28
RPN12YFR052W PEX21P50091 288 aa7.04□□□□□ -1.28
RPN12YFR052W APP1P53933 587 aa7.04□□□□□ -1.28
RPN12YFR052W FKS3Q04952 1785 aa7.04□□□□□ -1.28
RPN12YFR052W NUD1P32336 851 aa7.03□□□□□ -1.28
RPN12YFR052W TAF8Q03750 510 aa7.03□□□□□ -1.28
RPN12YFR052W TUM1Q08686 304 aaKnown RBP7.03□□□□□ -1.28
RPN12YFR052W ESL2P36168 1195 aa7.02□□□□□ -1.29
RPN12YFR052W URB1P34241 1764 aaKnown RBP7.02□□□□□ -1.29
RPN12YFR052W DMA1P38823 416 aa7.01□□□□□ -1.29
RPN12YFR052W TY1A-DR4O74302 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-HP0C2I4 478 aaKnown RBP7□□□□□ -1.29
RPN12YFR052W TY1A-AP0CX57 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-PR1P0CX58 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-ORP0CX59 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-PR2P0CX60 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-DR5P0CX65 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-ER2P0CX66 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-GR3P0CX67 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-LR1P0CX68 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-MR2P0CX69 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-JR2P47099 440 aa7□□□□□ -1.29
RPN12YFR052W RCM1P53972 490 aa7□□□□□ -1.29
RPN12YFR052W TY1A-DR1Q03856 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-ML1Q04706 440 aaKnown RBP7□□□□□ -1.29
RPN12YFR052W TY1A-BRQ12217 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-NL2Q12470 440 aa7□□□□□ -1.29
RPN12YFR052W TY1A-GR2Q12485 440 aa7□□□□□ -1.29
RPN12YFR052W SEC2P17065 759 aa6.99□□□□□ -1.29
RPN12YFR052W CST6P40535 587 aa6.99□□□□□ -1.29
RPN12YFR052W ORC1P54784 914 aaPredicted RBP6.99□□□□□ -1.29
RPN12YFR052W YRF1-3P0CX14 1859 aa6.98□□□□□ -1.29
RPN12YFR052W YRF1-7P0CX15 1859 aa6.98□□□□□ -1.29
RPN12YFR052W YRF1-6P53819 1859 aa6.98□□□□□ -1.29
RPN12YFR052W PPH3P32345 308 aa6.98□□□□□ -1.29
RPN12YFR052W ERG12P07277 443 aa6.97□□□□□ -1.29
RPN12YFR052W NAP1P25293 417 aaKnown RBP6.97□□□□□ -1.29
RPN12YFR052W CPS1P27614 576 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms