RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W GLC3P32775 704 aa6.39□□□□□ -1.39
SEC4YFL005W TAF7Q05021 590 aa6.39□□□□□ -1.39
SEC4YFL005W YNR021WP53723 404 aaKnown RBP6.38□□□□□ -1.39
SEC4YFL005W ARG82P07250 355 aa6.37□□□□□ -1.39
SEC4YFL005W LSC2P53312 427 aa6.37□□□□□ -1.39
SEC4YFL005W UBP2Q01476 1272 aa6.37□□□□□ -1.39
SEC4YFL005W TRM1P15565 570 aaKnown RBP6.36□□□□□ -1.39
SEC4YFL005W HST2P53686 357 aa6.36□□□□□ -1.39
SEC4YFL005W SCJ1P25303 377 aa6.35□□□□□ -1.39
SEC4YFL005W ICP55P40051 511 aa6.33□□□□□ -1.4
SEC4YFL005W AAD14P42884 376 aa6.33□□□□□ -1.4
SEC4YFL005W YPR204WQ08995 1032 aa6.33□□□□□ -1.4
SEC4YFL005W MMP1Q12372 583 aa6.33□□□□□ -1.4
SEC4YFL005W YBL086CP38177 466 aa6.32□□□□□ -1.4
SEC4YFL005W VAC17P25591 423 aa6.31□□□□□ -1.4
SEC4YFL005W GLN1P32288 370 aaKnown RBP6.29□□□□□ -1.4
SEC4YFL005W YJR098CP47139 656 aa6.29□□□□□ -1.4
SEC4YFL005W DPH6Q12429 685 aa6.29□□□□□ -1.4
SEC4YFL005W KIN1P13185 1064 aa6.28□□□□□ -1.4
SEC4YFL005W ATF2P53296 535 aa6.28□□□□□ -1.4
SEC4YFL005W AIM7Q12156 149 aa6.28□□□□□ -1.4
SEC4YFL005W OSH7P38755 437 aa6.27□□□□□ -1.41
SEC4YFL005W TCB1Q12466 1186 aa6.27□□□□□ -1.41
SEC4YFL005W ROG3P43602 733 aa6.26□□□□□ -1.41
SEC4YFL005W TY1A-MR1Q04215 440 aa6.26□□□□□ -1.41
SEC4YFL005W PUS1Q12211 544 aaKnown RBP6.26□□□□□ -1.41
SEC4YFL005W DLD1P32891 587 aa6.25□□□□□ -1.41
SEC4YFL005W EMW1P42842 904 aaKnown RBP6.25□□□□□ -1.41
SEC4YFL005W ESS1P22696 170 aa6.24□□□□□ -1.41
SEC4YFL005W LYS5P50113 272 aa6.24□□□□□ -1.41
SEC4YFL005W RSC30P38781 883 aa6.22□□□□□ -1.41
SEC4YFL005W APP1P53933 587 aa6.22□□□□□ -1.41
SEC4YFL005W PHM7Q12252 991 aa6.22□□□□□ -1.41
SEC4YFL005W LSB3P43603 459 aaKnown RBP6.21□□□□□ -1.42
SEC4YFL005W CCP1P00431 361 aa6.2□□□□□ -1.42
SEC4YFL005W YJU3P28321 313 aa6.2□□□□□ -1.42
SEC4YFL005W DMA2P53924 522 aa6.19□□□□□ -1.42
SEC4YFL005W ITT1Q04638 464 aa6.19□□□□□ -1.42
SEC4YFL005W KTR1P27810 393 aaKnown RBP6.18□□□□□ -1.42
SEC4YFL005W GUA1P38625 525 aaKnown RBP6.18□□□□□ -1.42
SEC4YFL005W JJJ3P47138 172 aa6.16□□□□□ -1.42
SEC4YFL005W MKS1P34072 584 aa6.15□□□□□ -1.42
SEC4YFL005W MDJ1P35191 511 aa6.15□□□□□ -1.42
SEC4YFL005W DFG5Q05031 458 aa6.15□□□□□ -1.42
SEC4YFL005W BDS1Q08347 646 aa6.14□□□□□ -1.43
SEC4YFL005W FIG4P42837 879 aa6.13□□□□□ -1.43
SEC4YFL005W CSN12P47130 423 aa6.13□□□□□ -1.43
SEC4YFL005W NAM8Q00539 523 aaKnown RBP6.12□□□□□ -1.43
SEC4YFL005W PKH3Q03306 898 aaPredicted RBP6.12□□□□□ -1.43
SEC4YFL005W CDC19P00549 500 aaKnown RBP6.11□□□□□ -1.43
SEC4YFL005W ARG8P18544 423 aa6.11□□□□□ -1.43
SEC4YFL005W VTC4P47075 721 aa6.1□□□□□ -1.43
SEC4YFL005W NSG2P53898 299 aa6.1□□□□□ -1.43
SEC4YFL005W STE6P12866 1290 aa6.09□□□□□ -1.43
SEC4YFL005W THI72Q08579 599 aa6.09□□□□□ -1.43
SEC4YFL005W AI1P03875 834 aa6.08□□□□□ -1.44
SEC4YFL005W FBP26P32604 452 aa6.08□□□□□ -1.44
SEC4YFL005W HGH1P48362 394 aaKnown RBP6.08□□□□□ -1.44
SEC4YFL005W TEC1P18412 486 aa6.06□□□□□ -1.44
SEC4YFL005W YFL066CP43538 392 aa6.06□□□□□ -1.44
SEC4YFL005W HPC2Q01448 625 aa6.06□□□□□ -1.44
SEC4YFL005W TFB3Q03290 321 aa6.06□□□□□ -1.44
SEC4YFL005W DAL1P32375 460 aa6.05□□□□□ -1.44
SEC4YFL005W CUZ1P53899 274 aa6.05□□□□□ -1.44
SEC4YFL005W PKC1P24583 1151 aa6.04□□□□□ -1.44
SEC4YFL005W CCT8P47079 568 aaKnown RBP6.04□□□□□ -1.44
SEC4YFL005W NRD1P53617 575 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SEC4YFL005W SSA2P10592 639 aaKnown RBP6.03□□□□□ -1.44
SEC4YFL005W CEM1P39525 442 aa6.03□□□□□ -1.44
SEC4YFL005W YPR084WQ06821 456 aa6.03□□□□□ -1.44
SEC4YFL005W RAD59Q12223 238 aa6.03□□□□□ -1.44
SEC4YFL005W ISU1Q03020 165 aa6.01□□□□□ -1.45
SEC4YFL005W RPP2BP02400 110 aaKnown RBP6□□□□□ -1.45
SEC4YFL005W GUT2P32191 649 aa5.99□□□□□ -1.45
SEC4YFL005W ATG20Q07528 640 aa5.99□□□□□ -1.45
SEC4YFL005W RLF2Q12495 606 aa5.99□□□□□ -1.45
SEC4YFL005W DLD3P39976 496 aaKnown RBP5.98□□□□□ -1.45
SEC4YFL005W ADE12P80210 433 aaKnown RBP5.98□□□□□ -1.45
SEC4YFL005W BRL1P38770 471 aa5.97□□□□□ -1.45
SEC4YFL005W YMR265CQ03508 461 aaKnown RBP5.97□□□□□ -1.45
SEC4YFL005W YPR053CQ6Q5F3 151 aa5.97□□□□□ -1.45
SEC4YFL005W DIT1P21623 536 aa5.96□□□□□ -1.46
SEC4YFL005W UBP15P50101 1230 aa5.96□□□□□ -1.46
SEC4YFL005W SYT1Q06836 1226 aa5.96□□□□□ -1.46
SEC4YFL005W SBP1P10080 294 aaKnown RBP5.94□□□□□ -1.46
SEC4YFL005W SKN7P38889 622 aa5.94□□□□□ -1.46
SEC4YFL005W MSN5P52918 1224 aa5.94□□□□□ -1.46
SEC4YFL005W MAK16P10962 306 aaPredicted RBP5.93□□□□□ -1.46
SEC4YFL005W STE20Q03497 939 aaKnown RBP5.93□□□□□ -1.46
SEC4YFL005W YDR461C-AQ2V2P7 80 aa5.93□□□□□ -1.46
SEC4YFL005W BIO2P32451 375 aa5.92□□□□□ -1.46
SEC4YFL005W YBL036CP38197 257 aa5.92□□□□□ -1.46
SEC4YFL005W KRE33P53914 1056 aaKnown RBP5.92□□□□□ -1.46
SEC4YFL005W NAF1P53919 492 aaKnown RBP5.92□□□□□ -1.46
SEC4YFL005W YMR187CQ03236 431 aa5.92□□□□□ -1.46
SEC4YFL005W SLA1P32790 1244 aa5.91□□□□□ -1.46
SEC4YFL005W YJL007CP47080 104 aa5.91□□□□□ -1.46
SEC4YFL005W FRA1Q07825 749 aa5.91□□□□□ -1.46
SEC4YFL005W SSN3P39073 555 aa5.9□□□□□ -1.46
SEC4YFL005W TDA6Q06466 467 aa5.9□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms