RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W BNR1P40450 1375 aa8.24□□□□□ -1.09
RPT3YDR394W XDJ1P39102 459 aa8.24□□□□□ -1.09
RPT3YDR394W PDR5P33302 1511 aaKnown RBP8.24□□□□□ -1.09
RPT3YDR394W TFB4Q12004 338 aa8.23□□□□□ -1.09
RPT3YDR394W PAF1P38351 445 aa8.22□□□□□ -1.09
RPT3YDR394W TRM3Q07527 1436 aa8.21□□□□□ -1.09
RPT3YDR394W PEX21P50091 288 aa8.21□□□□□ -1.1
RPT3YDR394W MAM3Q12296 706 aa8.21□□□□□ -1.1
RPT3YDR394W YRR1Q12172 810 aa8.2□□□□□ -1.1
RPT3YDR394W MVP1P40959 511 aaKnown RBP8.19□□□□□ -1.1
RPT3YDR394W SEC3P33332 1336 aaKnown RBP8.19□□□□□ -1.1
RPT3YDR394W IES2P40154 320 aa8.18□□□□□ -1.1
RPT3YDR394W TUM1Q08686 304 aaKnown RBP8.18□□□□□ -1.1
RPT3YDR394W RGR1P19263 1082 aa8.17□□□□□ -1.1
RPT3YDR394W SPB4P25808 606 aaPredicted RBP8.17□□□□□ -1.1
RPT3YDR394W DRS2P39524 1355 aa8.17□□□□□ -1.1
RPT3YDR394W RAV1P47104 1357 aa8.14□□□□□ -1.11
RPT3YDR394W YOR093CQ12275 1648 aa8.14□□□□□ -1.11
RPT3YDR394W PSE1P32337 1089 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W NUP42P49686 430 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W SEC7P11075 2009 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W NUD1P32336 851 aa8.12□□□□□ -1.11
RPT3YDR394W ENP1P38333 483 aaKnown RBP8.12□□□□□ -1.11
RPT3YDR394W STR2P47164 639 aa8.12□□□□□ -1.11
RPT3YDR394W RTC1Q08281 1341 aa8.11□□□□□ -1.11
RPT3YDR394W YPR109WQ06104 294 aa8.11□□□□□ -1.11
RPT3YDR394W ISM1P48526 1002 aa8.1□□□□□ -1.11
RPT3YDR394W BUD20Q08004 166 aaPredicted RBP8.1□□□□□ -1.11
RPT3YDR394W CHC1P22137 1653 aaKnown RBP8.1□□□□□ -1.11
RPT3YDR394W MHP1P43638 1398 aa8.09□□□□□ -1.12
RPT3YDR394W DOP1Q03921 1698 aa8.08□□□□□ -1.12
RPT3YDR394W TY3B-IQ7LHG5 1498 aaKnown RBP8.07□□□□□ -1.12
RPT3YDR394W DIT2P21595 489 aa8.07□□□□□ -1.12
RPT3YDR394W GYP1Q08484 637 aa8.07□□□□□ -1.12
RPT3YDR394W PDR11P40550 1411 aa8.06□□□□□ -1.12
RPT3YDR394W DPS1P04802 557 aaKnown RBP8.05□□□□□ -1.12
RPT3YDR394W SCT1P32784 759 aa8.05□□□□□ -1.12
RPT3YDR394W SPT7P35177 1332 aa8.04□□□□□ -1.12
RPT3YDR394W URN1Q06525 465 aaKnown RBP8.04□□□□□ -1.12
RPT3YDR394W VMR1P38735 1592 aa8.04□□□□□ -1.12
RPT3YDR394W IML1P47170 1584 aa8.04□□□□□ -1.12
RPT3YDR394W NUP188P52593 1655 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR4O74302 440 aa8.03□□□□□ -1.12
RPT3YDR394W PRT1P06103 763 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-HP0C2I4 478 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-AP0CX57 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-PR1P0CX58 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ORP0CX59 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-PR2P0CX60 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR5P0CX65 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ER2P0CX66 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-GR3P0CX67 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-LR1P0CX68 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-MR2P0CX69 440 aa8.03□□□□□ -1.12
RPT3YDR394W ESL2P36168 1195 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-JR2P47099 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR1Q03856 440 aa8.03□□□□□ -1.12
RPT3YDR394W SAS4Q04003 481 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ML1Q04706 440 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-BRQ12217 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-NL2Q12470 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-GR2Q12485 440 aa8.03□□□□□ -1.12
RPT3YDR394W SDH2P21801 266 aa8.02□□□□□ -1.13
RPT3YDR394W CLB5P30283 435 aa8.02□□□□□ -1.13
RPT3YDR394W NPL4P33755 580 aa8.02□□□□□ -1.13
RPT3YDR394W ITT1Q04638 464 aa8.02□□□□□ -1.13
RPT3YDR394W DNF2Q12675 1612 aa8.01□□□□□ -1.13
RPT3YDR394W SEC2P17065 759 aa8□□□□□ -1.13
RPT3YDR394W IPL1P38991 367 aa8□□□□□ -1.13
RPT3YDR394W TAF5P38129 798 aa7.99□□□□□ -1.13
RPT3YDR394W YLR419WQ06698 1435 aaKnown RBP7.98□□□□□ -1.13
RPT3YDR394W GCD11P32481 527 aaKnown RBP7.98□□□□□ -1.13
RPT3YDR394W ERF2Q06551 359 aa7.97□□□□□ -1.13
RPT3YDR394W RAS1P01119 309 aa7.96□□□□□ -1.14
RPT3YDR394W KEX2P13134 814 aa7.96□□□□□ -1.14
RPT3YDR394W TEA1P47988 759 aa7.96□□□□□ -1.14
RPT3YDR394W KIP3P53086 805 aaKnown RBP7.96□□□□□ -1.14
RPT3YDR394W BNI1P41832 1953 aa7.95□□□□□ -1.14
RPT3YDR394W ORC1P54784 914 aaPredicted RBP7.95□□□□□ -1.14
RPT3YDR394W NOP2P40991 618 aaKnown RBP7.94□□□□□ -1.14
RPT3YDR394W PDS5Q04264 1277 aa7.94□□□□□ -1.14
RPT3YDR394W HAP1P0CE41 1502 aa7.93□□□□□ -1.14
RPT3YDR394W AMS1P22855 1083 aa7.93□□□□□ -1.14
RPT3YDR394W TYS1P36421 394 aaKnown RBP7.93□□□□□ -1.14
RPT3YDR394W YAP3P38749 330 aa7.93□□□□□ -1.14
RPT3YDR394W YNR021WP53723 404 aaKnown RBP7.93□□□□□ -1.14
RPT3YDR394W NIS1P53939 407 aa7.93□□□□□ -1.14
RPT3YDR394W SIT4P20604 311 aa7.91□□□□□ -1.14
RPT3YDR394W SPE2P21182 396 aa7.91□□□□□ -1.14
RPT3YDR394W MRF1P30775 413 aaPredicted RBP7.91□□□□□ -1.14
RPT3YDR394W GLC3P32775 704 aa7.91□□□□□ -1.14
RPT3YDR394W NUP192P47054 1683 aa7.9□□□□□ -1.14
RPT3YDR394W RRN7P40992 514 aa7.9□□□□□ -1.14
RPT3YDR394W ALD4P46367 519 aaKnown RBP7.9□□□□□ -1.14
RPT3YDR394W SRC1Q03707 834 aa7.89□□□□□ -1.15
RPT3YDR394W YEL077CQ3E7X8 1277 aa7.89□□□□□ -1.15
RPT3YDR394W BCK1Q01389 1478 aa7.88□□□□□ -1.15
RPT3YDR394W NAP1P25293 417 aaKnown RBP7.88□□□□□ -1.15
RPT3YDR394W PRS1P32895 427 aaKnown RBP7.88□□□□□ -1.15
RPT3YDR394W RTF1P53064 558 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms