RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W BNR1P40450 1375 aa8.24□□□□□ -1.09
RPT3YDR394W XDJ1P39102 459 aa8.24□□□□□ -1.09
RPT3YDR394W PDR5P33302 1511 aaKnown RBP8.24□□□□□ -1.09
RPT3YDR394W TFB4Q12004 338 aa8.23□□□□□ -1.09
RPT3YDR394W PAF1P38351 445 aa8.22□□□□□ -1.09
RPT3YDR394W TRM3Q07527 1436 aa8.21□□□□□ -1.09
RPT3YDR394W PEX21P50091 288 aa8.21□□□□□ -1.1
RPT3YDR394W MAM3Q12296 706 aa8.21□□□□□ -1.1
RPT3YDR394W YRR1Q12172 810 aa8.2□□□□□ -1.1
RPT3YDR394W MVP1P40959 511 aaKnown RBP8.19□□□□□ -1.1
RPT3YDR394W SEC3P33332 1336 aaKnown RBP8.19□□□□□ -1.1
RPT3YDR394W IES2P40154 320 aa8.18□□□□□ -1.1
RPT3YDR394W TUM1Q08686 304 aaKnown RBP8.18□□□□□ -1.1
RPT3YDR394W RGR1P19263 1082 aa8.17□□□□□ -1.1
RPT3YDR394W SPB4P25808 606 aaPredicted RBP8.17□□□□□ -1.1
RPT3YDR394W DRS2P39524 1355 aa8.17□□□□□ -1.1
RPT3YDR394W RAV1P47104 1357 aa8.14□□□□□ -1.11
RPT3YDR394W YOR093CQ12275 1648 aa8.14□□□□□ -1.11
RPT3YDR394W PSE1P32337 1089 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W NUP42P49686 430 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W SEC7P11075 2009 aaKnown RBP8.13□□□□□ -1.11
RPT3YDR394W NUD1P32336 851 aa8.12□□□□□ -1.11
RPT3YDR394W ENP1P38333 483 aaKnown RBP8.12□□□□□ -1.11
RPT3YDR394W STR2P47164 639 aa8.12□□□□□ -1.11
RPT3YDR394W RTC1Q08281 1341 aa8.11□□□□□ -1.11
RPT3YDR394W YPR109WQ06104 294 aa8.11□□□□□ -1.11
RPT3YDR394W ISM1P48526 1002 aa8.1□□□□□ -1.11
RPT3YDR394W BUD20Q08004 166 aaPredicted RBP8.1□□□□□ -1.11
RPT3YDR394W CHC1P22137 1653 aaKnown RBP8.1□□□□□ -1.11
RPT3YDR394W MHP1P43638 1398 aa8.09□□□□□ -1.12
RPT3YDR394W DOP1Q03921 1698 aa8.08□□□□□ -1.12
RPT3YDR394W TY3B-IQ7LHG5 1498 aaKnown RBP8.07□□□□□ -1.12
RPT3YDR394W DIT2P21595 489 aa8.07□□□□□ -1.12
RPT3YDR394W GYP1Q08484 637 aa8.07□□□□□ -1.12
RPT3YDR394W PDR11P40550 1411 aa8.06□□□□□ -1.12
RPT3YDR394W DPS1P04802 557 aaKnown RBP8.05□□□□□ -1.12
RPT3YDR394W SCT1P32784 759 aa8.05□□□□□ -1.12
RPT3YDR394W SPT7P35177 1332 aa8.04□□□□□ -1.12
RPT3YDR394W URN1Q06525 465 aaKnown RBP8.04□□□□□ -1.12
RPT3YDR394W VMR1P38735 1592 aa8.04□□□□□ -1.12
RPT3YDR394W IML1P47170 1584 aa8.04□□□□□ -1.12
RPT3YDR394W NUP188P52593 1655 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR4O74302 440 aa8.03□□□□□ -1.12
RPT3YDR394W PRT1P06103 763 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-HP0C2I4 478 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-AP0CX57 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-PR1P0CX58 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ORP0CX59 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-PR2P0CX60 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR5P0CX65 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ER2P0CX66 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-GR3P0CX67 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-LR1P0CX68 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-MR2P0CX69 440 aa8.03□□□□□ -1.12
RPT3YDR394W ESL2P36168 1195 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-JR2P47099 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-DR1Q03856 440 aa8.03□□□□□ -1.12
RPT3YDR394W SAS4Q04003 481 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-ML1Q04706 440 aaKnown RBP8.03□□□□□ -1.12
RPT3YDR394W TY1A-BRQ12217 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-NL2Q12470 440 aa8.03□□□□□ -1.12
RPT3YDR394W TY1A-GR2Q12485 440 aa8.03□□□□□ -1.12
RPT3YDR394W SDH2P21801 266 aa8.02□□□□□ -1.13
RPT3YDR394W CLB5P30283 435 aa8.02□□□□□ -1.13
RPT3YDR394W NPL4P33755 580 aa8.02□□□□□ -1.13
RPT3YDR394W ITT1Q04638 464 aa8.02□□□□□ -1.13
RPT3YDR394W DNF2Q12675 1612 aa8.01□□□□□ -1.13
RPT3YDR394W SEC2P17065 759 aa8□□□□□ -1.13
RPT3YDR394W IPL1P38991 367 aa8□□□□□ -1.13
RPT3YDR394W TAF5P38129 798 aa7.99□□□□□ -1.13
RPT3YDR394W YLR419WQ06698 1435 aaKnown RBP7.98□□□□□ -1.13
RPT3YDR394W GCD11P32481 527 aaKnown RBP7.98□□□□□ -1.13
RPT3YDR394W ERF2Q06551 359 aa7.97□□□□□ -1.13
RPT3YDR394W RAS1P01119 309 aa7.96□□□□□ -1.14
RPT3YDR394W KEX2P13134 814 aa7.96□□□□□ -1.14
RPT3YDR394W TEA1P47988 759 aa7.96□□□□□ -1.14
RPT3YDR394W KIP3P53086 805 aaKnown RBP7.96□□□□□ -1.14
RPT3YDR394W BNI1P41832 1953 aa7.95□□□□□ -1.14
RPT3YDR394W ORC1P54784 914 aaPredicted RBP7.95□□□□□ -1.14
RPT3YDR394W NOP2P40991 618 aaKnown RBP7.94□□□□□ -1.14
RPT3YDR394W PDS5Q04264 1277 aa7.94□□□□□ -1.14
RPT3YDR394W HAP1P0CE41 1502 aa7.93□□□□□ -1.14
RPT3YDR394W AMS1P22855 1083 aa7.93□□□□□ -1.14
RPT3YDR394W TYS1P36421 394 aaKnown RBP7.93□□□□□ -1.14
RPT3YDR394W YAP3P38749 330 aa7.93□□□□□ -1.14
RPT3YDR394W YNR021WP53723 404 aaKnown RBP7.93□□□□□ -1.14
RPT3YDR394W NIS1P53939 407 aa7.93□□□□□ -1.14
RPT3YDR394W SIT4P20604 311 aa7.91□□□□□ -1.14
RPT3YDR394W SPE2P21182 396 aa7.91□□□□□ -1.14
RPT3YDR394W MRF1P30775 413 aaPredicted RBP7.91□□□□□ -1.14
RPT3YDR394W GLC3P32775 704 aa7.91□□□□□ -1.14
RPT3YDR394W NUP192P47054 1683 aa7.9□□□□□ -1.14
RPT3YDR394W RRN7P40992 514 aa7.9□□□□□ -1.14
RPT3YDR394W ALD4P46367 519 aaKnown RBP7.9□□□□□ -1.14
RPT3YDR394W SRC1Q03707 834 aa7.89□□□□□ -1.15
RPT3YDR394W YEL077CQ3E7X8 1277 aa7.89□□□□□ -1.15
RPT3YDR394W BCK1Q01389 1478 aa7.88□□□□□ -1.15
RPT3YDR394W NAP1P25293 417 aaKnown RBP7.88□□□□□ -1.15
RPT3YDR394W PRS1P32895 427 aaKnown RBP7.88□□□□□ -1.15
RPT3YDR394W RTF1P53064 558 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms