RNA–Protein interactions for RNA: YDR257C

RKM4, Transcript of Ribosomal lysine methyltransferase, yeastyeast

Gene RKM4, Length 1,485 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKM4YDR257C STE20Q03497 939 aaKnown RBP8.64□□□□□ -1.03
RKM4YDR257C TPD3P31383 635 aa8.64□□□□□ -1.03
RKM4YDR257C ISF1P32488 338 aa8.64□□□□□ -1.03
RKM4YDR257C FRA1Q07825 749 aa8.64□□□□□ -1.03
RKM4YDR257C NOB1Q08444 459 aaKnown RBP8.63□□□□□ -1.03
RKM4YDR257C ENV9Q08651 330 aa8.63□□□□□ -1.03
RKM4YDR257C ATG3P40344 310 aa8.62□□□□□ -1.03
RKM4YDR257C RPL34AP87262 121 aaPredicted RBP8.62□□□□□ -1.03
RKM4YDR257C RDS2P19541 446 aaKnown RBP8.61□□□□□ -1.03
RKM4YDR257C PEP12P32854 288 aa8.61□□□□□ -1.03
RKM4YDR257C TGL4P36165 910 aa8.61□□□□□ -1.03
RKM4YDR257C RRD1P40454 393 aaKnown RBP8.61□□□□□ -1.03
RKM4YDR257C PUP1P25043 261 aa8.6□□□□□ -1.03
RKM4YDR257C MRF1P30775 413 aaPredicted RBP8.6□□□□□ -1.03
RKM4YDR257C YPR084WQ06821 456 aa8.6□□□□□ -1.03
RKM4YDR257C MOD5P07884 428 aa8.58□□□□□ -1.04
RKM4YDR257C VAC17P25591 423 aa8.58□□□□□ -1.04
RKM4YDR257C KTR7P40504 517 aa8.56□□□□□ -1.04
RKM4YDR257C VRP1P37370 817 aa8.55□□□□□ -1.04
RKM4YDR257C SLX8P40072 274 aa8.55□□□□□ -1.04
RKM4YDR257C YML083CQ04526 418 aa8.55□□□□□ -1.04
RKM4YDR257C UTP13Q05946 817 aaKnown RBP8.55□□□□□ -1.04
RKM4YDR257C APL6P46682 809 aa8.53□□□□□ -1.04
RKM4YDR257C ECM23Q02710 187 aa8.52□□□□□ -1.05
RKM4YDR257C GAL2P13181 574 aa8.51□□□□□ -1.05
RKM4YDR257C SOH1P38633 127 aa8.51□□□□□ -1.05
RKM4YDR257C YML020WQ03722 664 aa8.51□□□□□ -1.05
RKM4YDR257C KIP2P28743 706 aa8.51□□□□□ -1.05
RKM4YDR257C CDC3P32457 520 aaKnown RBP8.51□□□□□ -1.05
RKM4YDR257C IXR1P33417 597 aa8.49□□□□□ -1.05
RKM4YDR257C PHO87P25360 923 aa8.47□□□□□ -1.05
RKM4YDR257C BDP1P46678 594 aa8.47□□□□□ -1.05
RKM4YDR257C SDH2P21801 266 aa8.46□□□□□ -1.05
RKM4YDR257C BCK2P33306 851 aa8.46□□□□□ -1.05
RKM4YDR257C UBX7P38349 436 aa8.46□□□□□ -1.05
RKM4YDR257C SYH1Q02875 849 aaKnown RBP8.46□□□□□ -1.05
RKM4YDR257C YEL077CQ3E7X8 1277 aa8.46□□□□□ -1.05
RKM4YDR257C HAP4P14064 554 aa8.45□□□□□ -1.06
RKM4YDR257C FRK1Q03002 865 aaPredicted RBP8.45□□□□□ -1.06
RKM4YDR257C ISR1Q06098 443 aaKnown RBP8.45□□□□□ -1.06
RKM4YDR257C PUS5Q06244 254 aa8.45□□□□□ -1.06
RKM4YDR257C NOP8Q08287 484 aaPredicted RBP8.45□□□□□ -1.06
RKM4YDR257C ATG20Q07528 640 aa8.44□□□□□ -1.06
RKM4YDR257C ITT1Q04638 464 aa8.43□□□□□ -1.06
RKM4YDR257C TSC13Q99190 310 aa8.43□□□□□ -1.06
RKM4YDR257C CST6P40535 587 aa8.42□□□□□ -1.06
RKM4YDR257C YFL034WP43564 1073 aa8.42□□□□□ -1.06
RKM4YDR257C HAL5P38970 855 aaKnown RBP8.41□□□□□ -1.06
RKM4YDR257C EMW1P42842 904 aaKnown RBP8.41□□□□□ -1.06
RKM4YDR257C ACS2P52910 683 aaKnown RBP8.41□□□□□ -1.06
RKM4YDR257C GAS4Q08271 471 aa8.41□□□□□ -1.06
RKM4YDR257C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.4□□□□□ -1.06not detected
RKM4YDR257C XDJ1P39102 459 aa8.39□□□□□ -1.07
RKM4YDR257C PUF6Q04373 656 aaKnown RBP8.39□□□□□ -1.07
RKM4YDR257C MIP1P15801 1254 aa8.38□□□□□ -1.07
RKM4YDR257C PDI1P17967 522 aaKnown RBP8.38□□□□□ -1.07
RKM4YDR257C APP1P53933 587 aa8.38□□□□□ -1.07
RKM4YDR257C SLD2P34252 453 aa8.38□□□□□ -1.07
RKM4YDR257C AIM9P40053 627 aaKnown RBP8.38□□□□□ -1.07
RKM4YDR257C ROM1P53046 1155 aa8.38□□□□□ -1.07
RKM4YDR257C HDA3Q06623 655 aa8.38□□□□□ -1.07
RKM4YDR257C HAT1Q12341 374 aa8.37□□□□□ -1.07
RKM4YDR257C SSF1P38789 453 aaPredicted RBP8.36□□□□□ -1.07
RKM4YDR257C MKS1P34072 584 aa8.35□□□□□ -1.07
RKM4YDR257C CWC15Q03772 175 aaKnown RBP8.35□□□□□ -1.07
RKM4YDR257C AMS1P22855 1083 aa8.34□□□□□ -1.07
RKM4YDR257C VAN1P23642 535 aa8.34□□□□□ -1.07
RKM4YDR257C FBP26P32604 452 aa8.34□□□□□ -1.07
RKM4YDR257C ISU1Q03020 165 aa8.34□□□□□ -1.07
RKM4YDR257C MRT4P33201 236 aaKnown RBP8.33□□□□□ -1.08
RKM4YDR257C HED1Q03937 162 aa8.33□□□□□ -1.08
RKM4YDR257C RPP2BP02400 110 aaKnown RBP8.32□□□□□ -1.08
RKM4YDR257C SPT2P06843 333 aaPredicted RBP8.32□□□□□ -1.08
RKM4YDR257C UTR2P32623 467 aa8.32□□□□□ -1.08
RKM4YDR257C NTH2P35172 780 aa8.32□□□□□ -1.08
RKM4YDR257C TRS33Q99394 268 aa8.32□□□□□ -1.08
RKM4YDR257C SRS2P12954 1174 aa8.3□□□□□ -1.08
RKM4YDR257C TPS3P38426 1054 aaKnown RBP8.3□□□□□ -1.08
RKM4YDR257C KAR5Q04746 504 aa8.3□□□□□ -1.08
RKM4YDR257C PUN1Q06991 263 aa8.3□□□□□ -1.08
RKM4YDR257C RPS6AP0CX37 236 aaKnown RBP8.29□□□□□ -1.08
RKM4YDR257C RPS6BP0CX38 236 aaPredicted RBP8.29□□□□□ -1.08
RKM4YDR257C TBS1P38114 1094 aa8.29□□□□□ -1.08
RKM4YDR257C YBL086CP38177 466 aa8.29□□□□□ -1.08
RKM4YDR257C PNP1Q05788 311 aa8.29□□□□□ -1.08
RKM4YDR257C CYT1P07143 309 aa8.28□□□□□ -1.08
RKM4YDR257C DAT1P13483 248 aaKnown RBP8.28□□□□□ -1.08
RKM4YDR257C UBP1P25037 809 aa8.28□□□□□ -1.08
RKM4YDR257C SWI5P08153 709 aa8.27□□□□□ -1.09
RKM4YDR257C STE6P12866 1290 aa8.27□□□□□ -1.09
RKM4YDR257C RTT106P40161 455 aa8.27□□□□□ -1.09
RKM4YDR257C YBL113CQ7M4S9 792 aa8.27□□□□□ -1.09
RKM4YDR257C CWH41P53008 833 aa8.26□□□□□ -1.09
RKM4YDR257C DFG5Q05031 458 aa8.26□□□□□ -1.09
RKM4YDR257C BDS1Q08347 646 aa8.26□□□□□ -1.09
RKM4YDR257C STM1P39015 273 aaKnown RBP8.25□□□□□ -1.09
RKM4YDR257C FUR4P05316 633 aaKnown RBP8.24□□□□□ -1.09
RKM4YDR257C ALD4P46367 519 aaKnown RBP8.24□□□□□ -1.09
RKM4YDR257C WTM2Q12206 467 aa8.24□□□□□ -1.09
RKM4YDR257C ERP5P38819 212 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 134.9 ms