RNA–Protein interactions for RNA: YDR143C

SAN1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene SAN1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAN1YDR143C CTF4Q01454 927 aa10.42□□□□□ -0.74
SAN1YDR143C INP54Q08227 384 aaKnown RBP10.42□□□□□ -0.74
SAN1YDR143C IMH1Q06704 911 aaKnown RBP10.42□□□□□ -0.74
SAN1YDR143C MAM1P40065 302 aa10.41□□□□□ -0.74
SAN1YDR143C NUP145P49687 1317 aa10.41□□□□□ -0.74
SAN1YDR143C YKL133CP36066 463 aa10.4□□□□□ -0.74
SAN1YDR143C ADE16P54113 591 aaKnown RBP10.4□□□□□ -0.74
SAN1YDR143C BMS1Q08965 1183 aaKnown RBP10.4□□□□□ -0.75
SAN1YDR143C MAK21Q12176 1025 aaKnown RBP10.4□□□□□ -0.75
SAN1YDR143C YRF1-3P0CX14 1859 aa10.39□□□□□ -0.75
SAN1YDR143C YRF1-7P0CX15 1859 aa10.39□□□□□ -0.75
SAN1YDR143C YRF1-6P53819 1859 aa10.39□□□□□ -0.75
SAN1YDR143C COQ4O13525 335 aa10.39□□□□□ -0.75
SAN1YDR143C FPR3P38911 411 aaKnown RBP10.39□□□□□ -0.75
SAN1YDR143C SRT1Q03175 343 aa10.39□□□□□ -0.75
SAN1YDR143C KCC4P25389 1037 aa10.38□□□□□ -0.75
SAN1YDR143C FRK1Q03002 865 aaPredicted RBP10.38□□□□□ -0.75
SAN1YDR143C MEC3Q02574 474 aa10.37□□□□□ -0.75
SAN1YDR143C TFA1P36100 482 aa10.37□□□□□ -0.75
SAN1YDR143C BUD27P43573 796 aaKnown RBP RIP-Chip data10.36□□□□□ -0.75not detected
SAN1YDR143C NSE3Q05541 303 aa10.36□□□□□ -0.75
SAN1YDR143C OSM1P21375 501 aaKnown RBP10.35□□□□□ -0.75
SAN1YDR143C UGA3P26370 528 aa10.35□□□□□ -0.75
SAN1YDR143C ALE1Q08548 619 aa10.35□□□□□ -0.75
SAN1YDR143C POL32P47110 350 aa10.35□□□□□ -0.75
SAN1YDR143C EDE1P34216 1381 aa10.34□□□□□ -0.75
SAN1YDR143C DOT5P40553 215 aa10.33□□□□□ -0.76
SAN1YDR143C ATG13Q06628 738 aa10.33□□□□□ -0.76
SAN1YDR143C TRP5P00931 707 aaKnown RBP10.32□□□□□ -0.76
SAN1YDR143C RAD4P14736 754 aa10.32□□□□□ -0.76
SAN1YDR143C PUF6Q04373 656 aaKnown RBP10.32□□□□□ -0.76
SAN1YDR143C ROM2P51862 1356 aaKnown RBP10.31□□□□□ -0.76
SAN1YDR143C COBP00163 385 aa10.31□□□□□ -0.76
SAN1YDR143C YIL055CP40523 627 aaKnown RBP10.31□□□□□ -0.76
SAN1YDR143C FOX2Q02207 900 aaKnown RBP10.31□□□□□ -0.76
SAN1YDR143C PRI1P10363 409 aa10.3□□□□□ -0.76
SAN1YDR143C CSI1Q04368 295 aa10.3□□□□□ -0.76
SAN1YDR143C YPP1P46951 817 aa10.3□□□□□ -0.76
SAN1YDR143C YBP2P53169 641 aa10.3□□□□□ -0.76
SAN1YDR143C YGR122WP53272 402 aa10.3□□□□□ -0.76
SAN1YDR143C ZDS2P54786 942 aa10.3□□□□□ -0.76
SAN1YDR143C YOL057WQ08225 711 aa10.3□□□□□ -0.76
SAN1YDR143C ILV3P39522 585 aaKnown RBP10.28□□□□□ -0.76
SAN1YDR143C LYS2P07702 1392 aa10.27□□□□□ -0.76
SAN1YDR143C RPC31P17890 251 aa10.27□□□□□ -0.77
SAN1YDR143C RAD24P32641 659 aa10.27□□□□□ -0.77
SAN1YDR143C RMT2Q03305 412 aa10.26□□□□□ -0.77
SAN1YDR143C MRP7P12687 371 aa10.26□□□□□ -0.77
SAN1YDR143C YKR075CP36155 307 aa10.26□□□□□ -0.77
SAN1YDR143C AAD16Q02895 342 aa10.26□□□□□ -0.77
SAN1YDR143C NOP8Q08287 484 aaPredicted RBP10.26□□□□□ -0.77
SAN1YDR143C TUM1Q08686 304 aaKnown RBP10.26□□□□□ -0.77
SAN1YDR143C YNG2P38806 282 aaKnown RBP10.24□□□□□ -0.77
SAN1YDR143C SWC3P31376 625 aa10.23□□□□□ -0.77
SAN1YDR143C YFR016CP43597 1233 aaKnown RBP10.23□□□□□ -0.77
SAN1YDR143C YDR306CQ06640 478 aa10.23□□□□□ -0.77
SAN1YDR143C SPO1P53541 631 aa10.23□□□□□ -0.77
SAN1YDR143C VPS64Q03944 604 aa10.23□□□□□ -0.77
SAN1YDR143C NOP53Q12080 455 aaKnown RBP10.23□□□□□ -0.77
SAN1YDR143C RPS19AP07280 144 aaKnown RBP10.22□□□□□ -0.77
SAN1YDR143C RPS19BP07281 144 aaPredicted RBP10.22□□□□□ -0.77
SAN1YDR143C RPN11P43588 306 aaKnown RBP10.22□□□□□ -0.77
SAN1YDR143C APL2P36000 726 aaPredicted RBP10.21□□□□□ -0.78
SAN1YDR143C NUP133P36161 1157 aa10.21□□□□□ -0.78
SAN1YDR143C LAM6Q08001 693 aa10.21□□□□□ -0.78
SAN1YDR143C RIM15P43565 1770 aa10.2□□□□□ -0.78
SAN1YDR143C SWI1P09547 1314 aa10.2□□□□□ -0.78
SAN1YDR143C GRX1P25373 110 aaKnown RBP10.19□□□□□ -0.78
SAN1YDR143C DNM1P54861 757 aa10.19□□□□□ -0.78
SAN1YDR143C CST6P40535 587 aa10.19□□□□□ -0.78
SAN1YDR143C BOI2P39969 1040 aa10.18□□□□□ -0.78
SAN1YDR143C PRP40P33203 583 aaKnown RBP10.17□□□□□ -0.78
SAN1YDR143C YJL181WP46987 611 aa10.17□□□□□ -0.78
SAN1YDR143C SSP2Q08646 371 aa10.17□□□□□ -0.78
SAN1YDR143C YMR074CQ04773 145 aa10.17□□□□□ -0.78
SAN1YDR143C NMD2P38798 1089 aaKnown RBP10.16□□□□□ -0.78
SAN1YDR143C NPR2P39923 615 aa10.15□□□□□ -0.78
SAN1YDR143C YPR204WQ08995 1032 aa10.15□□□□□ -0.78
SAN1YDR143C ARG8P18544 423 aa10.14□□□□□ -0.79
SAN1YDR143C GLN1P32288 370 aaKnown RBP10.14□□□□□ -0.79
SAN1YDR143C LPD1P09624 499 aaKnown RBP10.14□□□□□ -0.79
SAN1YDR143C TEA1P47988 759 aa10.14□□□□□ -0.79
SAN1YDR143C DCD1P06773 312 aa10.13□□□□□ -0.79
SAN1YDR143C YJR008WP47085 338 aa10.13□□□□□ -0.79
SAN1YDR143C YGL082WP53155 381 aa10.13□□□□□ -0.79
SAN1YDR143C PHM7Q12252 991 aa10.13□□□□□ -0.79
SAN1YDR143C MSB4Q12317 492 aa10.13□□□□□ -0.79
SAN1YDR143C GCD7P32502 381 aaPredicted RBP10.12□□□□□ -0.79
SAN1YDR143C PKH1Q03407 766 aa10.12□□□□□ -0.79
SAN1YDR143C NKP2Q06162 153 aa10.12□□□□□ -0.79
SAN1YDR143C GRE2Q12068 342 aaKnown RBP10.12□□□□□ -0.79
SAN1YDR143C SER1P33330 395 aaKnown RBP10.12□□□□□ -0.79
SAN1YDR143C RFC1P38630 861 aaKnown RBP10.12□□□□□ -0.79
SAN1YDR143C UBP12P39538 1254 aa10.11□□□□□ -0.79
SAN1YDR143C MDG1P53885 366 aa10.11□□□□□ -0.79
SAN1YDR143C FCP1Q03254 732 aa10.11□□□□□ -0.79
SAN1YDR143C HXT10P43581 546 aa10.1□□□□□ -0.79
SAN1YDR143C YLR271WQ06152 274 aa10.1□□□□□ -0.79
SAN1YDR143C BUD31P25337 157 aaPredicted RBP10.09□□□□□ -0.79
SAN1YDR143C BDP1P46678 594 aa10.09□□□□□ -0.79
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms