RNA–Protein interactions for RNA: YDR139C

RUB1, Transcript of Ubiquitin-like protein with similarity to mammalian NEDD8, yeastyeast

Gene RUB1, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUB1YDR139C RPA14P50106 137 aa6.82□□□□□ -1.32
RUB1YDR139C KXD1P53158 218 aa6.81□□□□□ -1.32
RUB1YDR139C ALR1Q08269 859 aa6.81□□□□□ -1.32
RUB1YDR139C MAK16P10962 306 aaPredicted RBP6.78□□□□□ -1.32
RUB1YDR139C YJL007CP47080 104 aa6.78□□□□□ -1.32
RUB1YDR139C YPR097WQ06839 1073 aa6.78□□□□□ -1.32
RUB1YDR139C PDC1P06169 563 aaKnown RBP6.77□□□□□ -1.33
RUB1YDR139C OPT2Q06593 877 aa6.77□□□□□ -1.33
RUB1YDR139C SPT5P27692 1063 aaKnown RBP6.76□□□□□ -1.33
RUB1YDR139C HXT10P43581 546 aa6.76□□□□□ -1.33
RUB1YDR139C TPD3P31383 635 aa6.75□□□□□ -1.33
RUB1YDR139C BIM1P40013 344 aa6.75□□□□□ -1.33
RUB1YDR139C BIO2P32451 375 aa6.74□□□□□ -1.33
RUB1YDR139C NAF1P53919 492 aaKnown RBP6.74□□□□□ -1.33
RUB1YDR139C RPL34BP40525 121 aaKnown RBP6.72□□□□□ -1.33
RUB1YDR139C RLF2Q12495 606 aa6.72□□□□□ -1.33
RUB1YDR139C ACO2P39533 789 aa6.71□□□□□ -1.34
RUB1YDR139C ATG32P40458 529 aa6.71□□□□□ -1.34
RUB1YDR139C YIR007WP40566 764 aa6.71□□□□□ -1.34
RUB1YDR139C PTK2P47116 818 aaKnown RBP6.71□□□□□ -1.34
RUB1YDR139C ITT1Q04638 464 aa6.71□□□□□ -1.34
RUB1YDR139C YNL108CP53929 270 aa6.7□□□□□ -1.34
RUB1YDR139C UGA3P26370 528 aa6.69□□□□□ -1.34
RUB1YDR139C TIF1P10081 395 aaKnown RBP6.68□□□□□ -1.34
RUB1YDR139C SUP45P12385 437 aaKnown RBP6.68□□□□□ -1.34
RUB1YDR139C TEC1P18412 486 aa6.68□□□□□ -1.34
RUB1YDR139C YDJ1P25491 409 aaKnown RBP6.68□□□□□ -1.34
RUB1YDR139C MSB3P48566 633 aaPredicted RBP6.68□□□□□ -1.34
RUB1YDR139C FIG4P42837 879 aa6.67□□□□□ -1.34
RUB1YDR139C HPF1Q05164 967 aa6.67□□□□□ -1.34
RUB1YDR139C VAC17P25591 423 aa6.66□□□□□ -1.34
RUB1YDR139C TRK2P28584 889 aa6.66□□□□□ -1.34
RUB1YDR139C YPP1P46951 817 aa6.66□□□□□ -1.34
RUB1YDR139C SYH1Q02875 849 aaKnown RBP6.66□□□□□ -1.34
RUB1YDR139C MTC5Q03897 1148 aa6.66□□□□□ -1.34
RUB1YDR139C ENO2P00925 437 aaKnown RBP6.64□□□□□ -1.35
RUB1YDR139C KIP2P28743 706 aa6.64□□□□□ -1.35
RUB1YDR139C GUT2P32191 649 aa6.64□□□□□ -1.35
RUB1YDR139C RTG2P32608 588 aaKnown RBP6.64□□□□□ -1.35
RUB1YDR139C MCM16Q12262 181 aa6.64□□□□□ -1.35
RUB1YDR139C IXR1P33417 597 aa6.63□□□□□ -1.35
RUB1YDR139C YGR035CP53222 116 aa6.63□□□□□ -1.35
RUB1YDR139C STE20Q03497 939 aaKnown RBP6.62□□□□□ -1.35
RUB1YDR139C YPR084WQ06821 456 aa6.62□□□□□ -1.35
RUB1YDR139C YPR204WQ08995 1032 aa6.62□□□□□ -1.35
RUB1YDR139C MRX12P47084 519 aa6.61□□□□□ -1.35
RUB1YDR139C RIM21P48565 533 aa6.61□□□□□ -1.35
RUB1YDR139C FRA1Q07825 749 aa6.61□□□□□ -1.35
RUB1YDR139C SRF1Q12516 437 aa6.61□□□□□ -1.35
RUB1YDR139C EMP47P43555 445 aa6.6□□□□□ -1.35
RUB1YDR139C TY1A-BLQ12266 440 aa6.6□□□□□ -1.35
RUB1YDR139C ISF1P32488 338 aa6.59□□□□□ -1.35
RUB1YDR139C ENO1P00924 437 aaKnown RBP6.58□□□□□ -1.36
RUB1YDR139C MRX10Q05648 414 aa6.58□□□□□ -1.36
RUB1YDR139C DLD1P32891 587 aa6.57□□□□□ -1.36
RUB1YDR139C ATG3P40344 310 aa6.57□□□□□ -1.36
RUB1YDR139C SIS2P36024 562 aa6.56□□□□□ -1.36
RUB1YDR139C SCW11P53189 542 aa6.55□□□□□ -1.36
RUB1YDR139C MDJ1P35191 511 aa6.54□□□□□ -1.36
RUB1YDR139C GLY1P37303 387 aaKnown RBP6.54□□□□□ -1.36
RUB1YDR139C MRT4P33201 236 aaKnown RBP6.53□□□□□ -1.36
RUB1YDR139C TTI1P36097 1038 aa6.53□□□□□ -1.36
RUB1YDR139C EMW1P42842 904 aaKnown RBP6.53□□□□□ -1.36
RUB1YDR139C NUP85P46673 744 aa6.53□□□□□ -1.36
RUB1YDR139C APL6P46682 809 aa6.53□□□□□ -1.36
RUB1YDR139C APP1P53933 587 aa6.53□□□□□ -1.36
RUB1YDR139C MIP1P15801 1254 aa6.52□□□□□ -1.37
RUB1YDR139C RDS2P19541 446 aaKnown RBP6.52□□□□□ -1.37
RUB1YDR139C UTP13Q05946 817 aaKnown RBP6.52□□□□□ -1.37
RUB1YDR139C YLR346CQ06139 101 aa6.52□□□□□ -1.37
RUB1YDR139C ATG20Q07528 640 aa6.51□□□□□ -1.37
RUB1YDR139C SSA4P22202 642 aaKnown RBP6.5□□□□□ -1.37
RUB1YDR139C CPS1P27614 576 aa6.5□□□□□ -1.37
RUB1YDR139C SOH1P38633 127 aa6.5□□□□□ -1.37
RUB1YDR139C PEP12P32854 288 aa6.49□□□□□ -1.37
RUB1YDR139C MKS1P34072 584 aa6.49□□□□□ -1.37
RUB1YDR139C RTT106P40161 455 aa6.49□□□□□ -1.37
RUB1YDR139C ISR1Q06098 443 aaKnown RBP6.48□□□□□ -1.37
RUB1YDR139C FBP26P32604 452 aa6.47□□□□□ -1.37
RUB1YDR139C YBL086CP38177 466 aa6.47□□□□□ -1.37
RUB1YDR139C TCB1Q12466 1186 aa6.47□□□□□ -1.37
RUB1YDR139C CCP1P00431 361 aa6.46□□□□□ -1.38
RUB1YDR139C KTR7P40504 517 aa6.46□□□□□ -1.38
RUB1YDR139C AAD14P42884 376 aa6.46□□□□□ -1.38
RUB1YDR139C LSB3P43603 459 aaKnown RBP6.46□□□□□ -1.38
RUB1YDR139C TGL4P36165 910 aa6.45□□□□□ -1.38
RUB1YDR139C ISU1Q03020 165 aa6.45□□□□□ -1.38
RUB1YDR139C HAL5P38970 855 aaKnown RBP6.44□□□□□ -1.38
RUB1YDR139C ROG3P43602 733 aa6.44□□□□□ -1.38
RUB1YDR139C YJR098CP47139 656 aa6.44□□□□□ -1.38
RUB1YDR139C SUB2Q07478 446 aaKnown RBP6.44□□□□□ -1.38
RUB1YDR139C RPP2BP02400 110 aaKnown RBP6.43□□□□□ -1.38
RUB1YDR139C DFG5Q05031 458 aa6.43□□□□□ -1.38
RUB1YDR139C STE6P12866 1290 aa6.42□□□□□ -1.38
RUB1YDR139C YFL034WP43564 1073 aa6.42□□□□□ -1.38
RUB1YDR139C BDS1Q08347 646 aa6.42□□□□□ -1.38
RUB1YDR139C SPT2P06843 333 aaPredicted RBP6.41□□□□□ -1.38
RUB1YDR139C PUP1P25043 261 aa6.41□□□□□ -1.38
RUB1YDR139C UTR2P32623 467 aa6.41□□□□□ -1.38
RUB1YDR139C LSC2P53312 427 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms