RNA–Protein interactions for RNA: YDR081C

PDC2, Transcript of Transcription factor for thiamine-regulated genes, yeast

Gene PDC2, Length 2,778 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDC2	YDR081C	RAS1	P01119	309 aa		4.34	□□□□□ -1.71
PDC2	YDR081C	ISF1	P32488	338 aa		4.34	□□□□□ -1.71
PDC2	YDR081C	YPR084W	Q06821	456 aa		4.34	□□□□□ -1.72
PDC2	YDR081C	PEP12	P32854	288 aa		4.33	□□□□□ -1.72
PDC2	YDR081C	PUP1	P25043	261 aa		4.33	□□□□□ -1.72
PDC2	YDR081C	GEF1	P37020	779 aa		4.33	□□□□□ -1.72
PDC2	YDR081C	FIG4	P42837	879 aa		4.33	□□□□□ -1.72
PDC2	YDR081C	YML083C	Q04526	418 aa		4.33	□□□□□ -1.72
PDC2	YDR081C	MOD5	P07884	428 aa		4.31	□□□□□ -1.72
PDC2	YDR081C	EMP47	P43555	445 aa		4.31	□□□□□ -1.72
PDC2	YDR081C	ALR1	Q08269	859 aa		4.31	□□□□□ -1.72
PDC2	YDR081C	KOG1	P38873	1557 aa		4.31	□□□□□ -1.72
PDC2	YDR081C	TEC1	P18412	486 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	TGL4	P36165	910 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	HXT10	P43581	546 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	YPP1	P46951	817 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	TPD3	P31383	635 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	RRD1	P40454	393 aa	Known RBP	4.3	□□□□□ -1.72
PDC2	YDR081C	FRA1	Q07825	749 aa		4.3	□□□□□ -1.72
PDC2	YDR081C	APL6	P46682	809 aa		4.29	□□□□□ -1.72
PDC2	YDR081C	SPT16	P32558	1035 aa	Known RBP	4.29	□□□□□ -1.72
PDC2	YDR081C	SIS2	P36024	562 aa		4.29	□□□□□ -1.72
PDC2	YDR081C	KXD1	P53158	218 aa		4.29	□□□□□ -1.72
PDC2	YDR081C	VAC17	P25591	423 aa		4.28	□□□□□ -1.72
PDC2	YDR081C	ITT1	Q04638	464 aa		4.28	□□□□□ -1.72
PDC2	YDR081C	GYP1	Q08484	637 aa		4.28	□□□□□ -1.72
PDC2	YDR081C	PAT1	P25644	796 aa	Known RBP	4.27	□□□□□ -1.73
PDC2	YDR081C	GUT2	P32191	649 aa		4.27	□□□□□ -1.73
PDC2	YDR081C	KTR7	P40504	517 aa		4.27	□□□□□ -1.73
PDC2	YDR081C	STE20	Q03497	939 aa	Known RBP	4.27	□□□□□ -1.73
PDC2	YDR081C	SAS4	Q04003	481 aa		4.27	□□□□□ -1.73
PDC2	YDR081C	YML020W	Q03722	664 aa		4.26	□□□□□ -1.73
PDC2	YDR081C	AMS1	P22855	1083 aa		4.26	□□□□□ -1.73
PDC2	YDR081C	SLX8	P40072	274 aa		4.25	□□□□□ -1.73
PDC2	YDR081C	ECM23	Q02710	187 aa		4.25	□□□□□ -1.73
PDC2	YDR081C	NOP8	Q08287	484 aa	Predicted RBP	4.25	□□□□□ -1.73
PDC2	YDR081C	MRX12	P47084	519 aa		4.25	□□□□□ -1.73
PDC2	YDR081C	ENV9	Q08651	330 aa		4.25	□□□□□ -1.73
PDC2	YDR081C	SOH1	P38633	127 aa		4.24	□□□□□ -1.73
PDC2	YDR081C	GAL2	P13181	574 aa		4.24	□□□□□ -1.73
PDC2	YDR081C	IXR1	P33417	597 aa		4.24	□□□□□ -1.73
PDC2	YDR081C	HAL5	P38970	855 aa	Known RBP	4.24	□□□□□ -1.73
PDC2	YDR081C	CST6	P40535	587 aa		4.24	□□□□□ -1.73
PDC2	YDR081C	BDP1	P46678	594 aa		4.23	□□□□□ -1.73
PDC2	YDR081C	ORC1	P54784	914 aa	Predicted RBP	4.23	□□□□□ -1.73
PDC2	YDR081C	RPL34A	P87262	121 aa	Predicted RBP	4.23	□□□□□ -1.73
PDC2	YDR081C	PUS5	Q06244	254 aa		4.23	□□□□□ -1.73
PDC2	YDR081C	UTP13	Q05946	817 aa	Known RBP	4.23	□□□□□ -1.73
PDC2	YDR081C	DNA2	P38859	1522 aa		4.22	□□□□□ -1.73
PDC2	YDR081C	UBX7	P38349	436 aa		4.21	□□□□□ -1.73
PDC2	YDR081C	TPS3	P38426	1054 aa	Known RBP	4.21	□□□□□ -1.73
PDC2	YDR081C	ACS2	P52910	683 aa	Known RBP	4.21	□□□□□ -1.73
PDC2	YDR081C	PHO87	P25360	923 aa		4.21	□□□□□ -1.74
PDC2	YDR081C	CDC3	P32457	520 aa	Known RBP	4.2	□□□□□ -1.74
PDC2	YDR081C	ATG3	P40344	310 aa		4.2	□□□□□ -1.74
PDC2	YDR081C	ROM1	P53046	1155 aa		4.2	□□□□□ -1.74
PDC2	YDR081C	ISR1	Q06098	443 aa	Known RBP	4.2	□□□□□ -1.74
PDC2	YDR081C	MRF1	P30775	413 aa	Predicted RBP	4.2	□□□□□ -1.74
PDC2	YDR081C	APP1	P53933	587 aa		4.19	□□□□□ -1.74
PDC2	YDR081C	FRK1	Q03002	865 aa	Predicted RBP	4.19	□□□□□ -1.74
PDC2	YDR081C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PDC2	YDR081C	EMW1	P42842	904 aa	Known RBP	4.19	□□□□□ -1.74
PDC2	YDR081C	CWC15	Q03772	175 aa	Known RBP	4.19	□□□□□ -1.74
PDC2	YDR081C	YEL077C	Q3E7X8	1277 aa		4.19	□□□□□ -1.74
PDC2	YDR081C	PDI1	P17967	522 aa	Known RBP	4.18	□□□□□ -1.74
PDC2	YDR081C	KIP2	P28743	706 aa		4.18	□□□□□ -1.74
PDC2	YDR081C	SSF1	P38789	453 aa	Predicted RBP	4.18	□□□□□ -1.74
PDC2	YDR081C	ATG20	Q07528	640 aa		4.18	□□□□□ -1.74
PDC2	YDR081C	MIP1	P15801	1254 aa		4.18	□□□□□ -1.74
PDC2	YDR081C	HDA3	Q06623	655 aa		4.18	□□□□□ -1.74
PDC2	YDR081C	TSC13	Q99190	310 aa		4.18	□□□□□ -1.74
PDC2	YDR081C	HAP4	P14064	554 aa		4.17	□□□□□ -1.74
PDC2	YDR081C	CLA4	P48562	842 aa		4.17	□□□□□ -1.74
PDC2	YDR081C	SYH1	Q02875	849 aa	Known RBP	4.17	□□□□□ -1.74
PDC2	YDR081C	HAT1	Q12341	374 aa		4.17	□□□□□ -1.74
PDC2	YDR081C	TRK1	P12685	1235 aa		4.17	□□□□□ -1.74
PDC2	YDR081C	AIM9	P40053	627 aa	Known RBP	4.16	□□□□□ -1.74
PDC2	YDR081C	AIR1	P40507	360 aa	Known RBP	4.16	□□□□□ -1.74
PDC2	YDR081C	MRT4	P33201	236 aa	Known RBP	4.16	□□□□□ -1.74
PDC2	YDR081C	YRB30	P53107	440 aa	Predicted RBP	4.15	□□□□□ -1.74
PDC2	YDR081C	SEN54	Q02825	467 aa	Predicted RBP	4.15	□□□□□ -1.74
PDC2	YDR081C	GAS4	Q08271	471 aa		4.15	□□□□□ -1.74
PDC2	YDR081C	SUV3	P32580	737 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	ISU1	Q03020	165 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	PUF6	Q04373	656 aa	Known RBP	4.14	□□□□□ -1.75
PDC2	YDR081C	FBP26	P32604	452 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	SPT2	P06843	333 aa	Predicted RBP	4.14	□□□□□ -1.75
PDC2	YDR081C	NTH2	P35172	780 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	YBL086C	P38177	466 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	BOL3	P39724	118 aa		4.14	□□□□□ -1.75
PDC2	YDR081C	TRL1	P09880	827 aa	Known RBP	4.13	□□□□□ -1.75
PDC2	YDR081C	MKS1	P34072	584 aa		4.13	□□□□□ -1.75
PDC2	YDR081C	ERP5	P38819	212 aa		4.13	□□□□□ -1.75
PDC2	YDR081C	SWI5	P08153	709 aa		4.12	□□□□□ -1.75
PDC2	YDR081C	RPS6A	P0CX37	236 aa	Known RBP	4.12	□□□□□ -1.75
PDC2	YDR081C	RPS6B	P0CX38	236 aa	Predicted RBP	4.12	□□□□□ -1.75
PDC2	YDR081C	STE6	P12866	1290 aa		4.12	□□□□□ -1.75
PDC2	YDR081C	UBP1	P25037	809 aa		4.12	□□□□□ -1.75
PDC2	YDR081C	YFL034W	P43564	1073 aa		4.12	□□□□□ -1.75
PDC2	YDR081C	HED1	Q03937	162 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms