RNA–Protein interactions for RNA: YDL195W

SEC31, Transcript of Component of the Sec13p-Sec31p complex of the COPII vesicle coat, yeast

Gene SEC31, Length 3,822 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC31	YDL195W	HO	P09932	586 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	RTG3	P38165	486 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	SET1	P38827	1080 aa	Known RBP	2.65	□□□□□ -1.99
SEC31	YDL195W	TFB3	Q03290	321 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	ROM2	P51862	1356 aa	Known RBP	2.65	□□□□□ -1.99
SEC31	YDL195W	PPH3	P32345	308 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	IES2	P40154	320 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	RTS3	P53289	263 aa		2.65	□□□□□ -1.99
SEC31	YDL195W	JIP5	Q06214	492 aa	Predicted RBP	2.64	□□□□□ -1.99
SEC31	YDL195W	SPE2	P21182	396 aa		2.64	□□□□□ -1.99
SEC31	YDL195W	RCR1	P38212	213 aa		2.64	□□□□□ -1.99
SEC31	YDL195W	SSA1	P10591	642 aa	Known RBP	2.63	□□□□□ -1.99
SEC31	YDL195W	UGA2	P38067	497 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	BRN1	P38170	754 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	RRT14	P40470	206 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	HAT1	Q12341	374 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	PRD1	P25375	712 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	KIP3	P53086	805 aa	Known RBP	2.63	□□□□□ -1.99
SEC31	YDL195W	ECM23	Q02710	187 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	LSP1	Q12230	341 aa	Known RBP	2.63	□□□□□ -1.99
SEC31	YDL195W	CDC16	P09798	840 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	SAP155	P43612	1002 aa		2.63	□□□□□ -1.99
SEC31	YDL195W	YLR326W	Q06170	240 aa	Known RBP	2.63	□□□□□ -1.99
SEC31	YDL195W	DIT2	P21595	489 aa		2.62	□□□□□ -1.99
SEC31	YDL195W	HGH1	P48362	394 aa	Known RBP	2.62	□□□□□ -1.99
SEC31	YDL195W	PPG1	P32838	368 aa		2.62	□□□□□ -1.99
SEC31	YDL195W	RRD1	P40454	393 aa	Known RBP	2.62	□□□□□ -1.99
SEC31	YDL195W	GLN1	P32288	370 aa	Known RBP	2.62	□□□□□ -1.99
SEC31	YDL195W	RRN6	P32786	894 aa		2.62	□□□□□ -1.99
SEC31	YDL195W	TAF5	P38129	798 aa		2.62	□□□□□ -1.99
SEC31	YDL195W	FLO1	P32768	1537 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	PXL1	P36166	706 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	MGA2	P40578	1113 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	ILV3	P39522	585 aa	Known RBP	2.61	□□□□□ -1.99
SEC31	YDL195W	BIM1	P40013	344 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	ATG32	P40458	529 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	HAP5	Q02516	242 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	PMD1	P32634	1753 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	GEF1	P37020	779 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	PAF1	P38351	445 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	SNF7	P39929	240 aa	Known RBP	2.61	□□□□□ -1.99
SEC31	YDL195W	AIM21	P40563	679 aa		2.61	□□□□□ -1.99
SEC31	YDL195W	KNS1	P32350	737 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC31	YDL195W	GCD7	P32502	381 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC31	YDL195W	YML083C	Q04526	418 aa		2.6	□□□□□ -1.99
SEC31	YDL195W	SUB2	Q07478	446 aa	Known RBP	2.6	□□□□□ -1.99
SEC31	YDL195W	PBS2	P08018	668 aa		2.6	□□□□□ -1.99
SEC31	YDL195W	YDR306C	Q06640	478 aa		2.6	□□□□□ -1.99
SEC31	YDL195W	HIM1	Q06674	414 aa		2.6	□□□□□ -1.99
SEC31	YDL195W	TYW1	Q08960	810 aa	Known RBP	2.6	□□□□□ -1.99
SEC31	YDL195W	MRM1	P25270	412 aa		2.59	□□□□□ -1.99
SEC31	YDL195W	ORC1	P54784	914 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC31	YDL195W	LAM6	Q08001	693 aa		2.59	□□□□□ -1.99
SEC31	YDL195W	RPS19A	P07280	144 aa	Known RBP	2.59	□□□□□ -1.99
SEC31	YDL195W	RPS19B	P07281	144 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC31	YDL195W	MPE1	P35728	441 aa	Known RBP	2.59	□□□□□ -1.99
SEC31	YDL195W	HYR1	P40581	163 aa	Known RBP	2.59	□□□□□ -1.99
SEC31	YDL195W	TSR4	P25040	408 aa		2.59	□□□□□ -2
SEC31	YDL195W	PRP40	P33203	583 aa	Known RBP	2.59	□□□□□ -2
SEC31	YDL195W	POL32	P47110	350 aa		2.59	□□□□□ -2
SEC31	YDL195W	RSM7	P47150	247 aa		2.59	□□□□□ -2
SEC31	YDL195W	TAF8	Q03750	510 aa		2.59	□□□□□ -2
SEC31	YDL195W	YMR074C	Q04773	145 aa		2.59	□□□□□ -2
SEC31	YDL195W	RTT109	Q07794	436 aa		2.59	□□□□□ -2
SEC31	YDL195W	TSR3	Q12094	313 aa	Known RBP	2.59	□□□□□ -2
SEC31	YDL195W	MAM3	Q12296	706 aa		2.59	□□□□□ -2
SEC31	YDL195W	MBR1	P23493	339 aa		2.58	□□□□□ -2
SEC31	YDL195W	RAM2	P29703	316 aa		2.58	□□□□□ -2
SEC31	YDL195W	NOT3	P06102	836 aa	Known RBP	2.58	□□□□□ -2
SEC31	YDL195W	PCT1	P13259	424 aa		2.58	□□□□□ -2
SEC31	YDL195W	ROX1	P25042	368 aa		2.58	□□□□□ -2
SEC31	YDL195W	PIL1	P53252	339 aa	Known RBP	2.58	□□□□□ -2
SEC31	YDL195W	APP1	P53933	587 aa		2.58	□□□□□ -2
SEC31	YDL195W	SLD2	P34252	453 aa		2.58	□□□□□ -2
SEC31	YDL195W	ALD2	P47771	506 aa		2.58	□□□□□ -2
SEC31	YDL195W	RIA1	P53893	1110 aa		2.58	□□□□□ -2
SEC31	YDL195W	YNL050C	P53952	270 aa		2.58	□□□□□ -2
SEC31	YDL195W	IMH1	Q06704	911 aa	Known RBP	2.58	□□□□□ -2
SEC31	YDL195W	RSF2	P46974	1380 aa		2.57	□□□□□ -2
SEC31	YDL195W	TRL1	P09880	827 aa	Known RBP	2.57	□□□□□ -2
SEC31	YDL195W	SNU71	P53207	620 aa	Known RBP	2.57	□□□□□ -2
SEC31	YDL195W	YNL108C	P53929	270 aa		2.57	□□□□□ -2
SEC31	YDL195W	YDL144C	Q07589	356 aa		2.57	□□□□□ -2
SEC31	YDL195W	RIM101	P33400	625 aa		2.57	□□□□□ -2
SEC31	YDL195W	YNR029C	P53729	429 aa	Known RBP	2.57	□□□□□ -2
SEC31	YDL195W	CAB1	Q04430	367 aa		2.57	□□□□□ -2
SEC31	YDL195W	YPR148C	Q06523	435 aa		2.57	□□□□□ -2
SEC31	YDL195W	SLN1	P39928	1220 aa	Predicted RBP	2.56	□□□□□ -2
SEC31	YDL195W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
SEC31	YDL195W	YFR016C	P43597	1233 aa	Known RBP	2.56	□□□□□ -2
SEC31	YDL195W	MTR4	P47047	1073 aa	Known RBP	2.56	□□□□□ -2
SEC31	YDL195W	ENT1	Q12518	454 aa		2.56	□□□□□ -2
SEC31	YDL195W	GRX4	P32642	244 aa		2.56	□□□□□ -2
SEC31	YDL195W	SCT1	P32784	759 aa		2.56	□□□□□ -2
SEC31	YDL195W	DSD1	P53095	428 aa		2.56	□□□□□ -2
SEC31	YDL195W	RAD50	P12753	1312 aa		2.56	□□□□□ -2
SEC31	YDL195W	NTH2	P35172	780 aa		2.56	□□□□□ -2
SEC31	YDL195W	MPP10	P47083	593 aa	Known RBP	2.56	□□□□□ -2
SEC31	YDL195W	PIB1	Q06651	286 aa		2.56	□□□□□ -2
SEC31	YDL195W	ENV9	Q08651	330 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms