RNA–Protein interactions for RNA: YBR283C

SSH1, Transcript of Subunit of the Ssh1 translocon complex, yeastyeast

Gene SSH1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH1YBR283C CPS1P27614 576 aa5.25□□□□□ -1.57
SSH1YBR283C GTT3P39996 337 aa5.25□□□□□ -1.57
SSH1YBR283C REF2P42073 533 aaPredicted RBP5.24□□□□□ -1.57
SSH1YBR283C CDC45Q08032 650 aa5.24□□□□□ -1.57
SSH1YBR283C MAK21Q12176 1025 aaKnown RBP5.24□□□□□ -1.57
SSH1YBR283C RPC31P17890 251 aa5.23□□□□□ -1.57
SSH1YBR283C CAB3P36076 571 aa5.23□□□□□ -1.57
SSH1YBR283C VPS27P40343 622 aaKnown RBP5.23□□□□□ -1.57
SSH1YBR283C CHZ1P40019 153 aaPredicted RBP5.22□□□□□ -1.57
SSH1YBR283C YNR021WP53723 404 aaKnown RBP5.22□□□□□ -1.57
SSH1YBR283C ENT1Q12518 454 aa5.22□□□□□ -1.57
SSH1YBR283C PTC3P34221 468 aaKnown RBP5.21□□□□□ -1.58
SSH1YBR283C EBP2P36049 427 aaKnown RBP5.21□□□□□ -1.58
SSH1YBR283C EDS1P38073 919 aa5.21□□□□□ -1.58
SSH1YBR283C MAM3Q12296 706 aa5.21□□□□□ -1.58
SSH1YBR283C RVB2Q12464 471 aaKnown RBP5.21□□□□□ -1.58
SSH1YBR283C TY4B-HP0C2J7 1802 aa5.21□□□□□ -1.58
SSH1YBR283C TY4B-JP47024 1803 aa5.21□□□□□ -1.58
SSH1YBR283C CLC1P17891 233 aa5.2□□□□□ -1.58
SSH1YBR283C PRP45P28004 379 aaPredicted RBP5.2□□□□□ -1.58
SSH1YBR283C SCT1P32784 759 aa5.2□□□□□ -1.58
SSH1YBR283C YIR014WP40570 242 aa5.2□□□□□ -1.58
SSH1YBR283C YRB30P53107 440 aaPredicted RBP5.2□□□□□ -1.58
SSH1YBR283C ENV9Q08651 330 aa5.2□□□□□ -1.58
SSH1YBR283C RRP5Q05022 1729 aaKnown RBP5.19□□□□□ -1.58
SSH1YBR283C FUN12P39730 1002 aaKnown RBP5.19□□□□□ -1.58
SSH1YBR283C PSK1P31374 1356 aa5.19□□□□□ -1.58
SSH1YBR283C RPS24AP0CX31 135 aaKnown RBP5.18□□□□□ -1.58
SSH1YBR283C RPS24BP0CX32 135 aaKnown RBP5.18□□□□□ -1.58
SSH1YBR283C HGH1P48362 394 aaKnown RBP5.18□□□□□ -1.58
SSH1YBR283C AIM7Q12156 149 aa5.18□□□□□ -1.58
SSH1YBR283C YML133CQ03099 1374 aa5.17□□□□□ -1.58
SSH1YBR283C YLL067CQ07888 1374 aa5.17□□□□□ -1.58
SSH1YBR283C YLL066CQ99208 1374 aa5.17□□□□□ -1.58
SSH1YBR283C COX6P00427 148 aa5.17□□□□□ -1.58
SSH1YBR283C VMA1P17255 1071 aaKnown RBP5.17□□□□□ -1.58
SSH1YBR283C PRP5P21372 849 aaPredicted RBP5.17□□□□□ -1.58
SSH1YBR283C CSE4P36012 229 aa5.17□□□□□ -1.58
SSH1YBR283C GLN1P32288 370 aaKnown RBP5.16□□□□□ -1.58
SSH1YBR283C RTG1P32607 177 aa5.16□□□□□ -1.58
SSH1YBR283C FPR3P38911 411 aaKnown RBP5.16□□□□□ -1.58
SSH1YBR283C YFR016CP43597 1233 aaKnown RBP5.16□□□□□ -1.58
SSH1YBR283C ATH1P48016 1211 aa5.16□□□□□ -1.58
SSH1YBR283C MSB3P48566 633 aaPredicted RBP5.16□□□□□ -1.58
SSH1YBR283C GRE2Q12068 342 aaKnown RBP5.16□□□□□ -1.58
SSH1YBR283C NCR1Q12200 1170 aa5.16□□□□□ -1.58
SSH1YBR283C SNF2P22082 1703 aa5.16□□□□□ -1.58
SSH1YBR283C ADE6P38972 1358 aaKnown RBP5.15□□□□□ -1.58
SSH1YBR283C LEU2P04173 364 aaPredicted RBP5.15□□□□□ -1.58
SSH1YBR283C GUT1P32190 709 aa5.15□□□□□ -1.58
SSH1YBR283C DMA2P53924 522 aa5.15□□□□□ -1.58
SSH1YBR283C IMH1Q06704 911 aaKnown RBP5.15□□□□□ -1.58
SSH1YBR283C YDL144CQ07589 356 aa5.15□□□□□ -1.58
SSH1YBR283C SNF7P39929 240 aaKnown RBP5.14□□□□□ -1.59
SSH1YBR283C IES2P40154 320 aa5.14□□□□□ -1.59
SSH1YBR283C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
SSH1YBR283C KIN1P13185 1064 aa5.13□□□□□ -1.59
SSH1YBR283C YEF3P16521 1044 aaKnown RBP5.13□□□□□ -1.59
SSH1YBR283C SUI2P20459 304 aaKnown RBP5.13□□□□□ -1.59
SSH1YBR283C EAF7P53911 425 aaKnown RBP5.13□□□□□ -1.59
SSH1YBR283C PIB1Q06651 286 aa5.13□□□□□ -1.59
SSH1YBR283C SAM3Q08986 587 aa5.13□□□□□ -1.59
SSH1YBR283C YIL177CP40434 1758 aa5.13□□□□□ -1.59
SSH1YBR283C YJL225CP40889 1758 aa5.13□□□□□ -1.59
SSH1YBR283C TRK1P12685 1235 aa5.13□□□□□ -1.59
SSH1YBR283C MTR4P47047 1073 aaKnown RBP5.13□□□□□ -1.59
SSH1YBR283C GAS4Q08271 471 aa5.13□□□□□ -1.59
SSH1YBR283C YRF1-2P40105 1681 aa5.12□□□□□ -1.59
SSH1YBR283C KIC1P38692 1080 aa5.12□□□□□ -1.59
SSH1YBR283C NUP42P49686 430 aaKnown RBP5.12□□□□□ -1.59
SSH1YBR283C ROX1P25042 368 aa5.11□□□□□ -1.59
SSH1YBR283C GLC3P32775 704 aa5.11□□□□□ -1.59
SSH1YBR283C PRP43P53131 767 aaKnown RBP5.11□□□□□ -1.59
SSH1YBR283C ATF2P53296 535 aa5.11□□□□□ -1.59
SSH1YBR283C SLM3Q12093 417 aa5.11□□□□□ -1.59
SSH1YBR283C DPS1P04802 557 aaKnown RBP5.1□□□□□ -1.59
SSH1YBR283C HIM1Q06674 414 aa5.1□□□□□ -1.59
SSH1YBR283C GYP5Q12344 894 aa5.1□□□□□ -1.59
SSH1YBR283C TCB1Q12466 1186 aa5.1□□□□□ -1.59
SSH1YBR283C URB1P34241 1764 aaKnown RBP5.09□□□□□ -1.59
SSH1YBR283C DIT2P21595 489 aa5.09□□□□□ -1.59
SSH1YBR283C MPP10P47083 593 aaKnown RBP5.09□□□□□ -1.59
SSH1YBR283C TCB2P48231 1178 aa5.09□□□□□ -1.59
SSH1YBR283C YMR074CQ04773 145 aa5.09□□□□□ -1.59
SSH1YBR283C XKS1P42826 600 aa5.08□□□□□ -1.6
SSH1YBR283C RRP46P53256 223 aaPredicted RBP5.08□□□□□ -1.6
SSH1YBR283C PDI1P17967 522 aaKnown RBP5.07□□□□□ -1.6
SSH1YBR283C UBP14P38237 781 aaKnown RBP5.07□□□□□ -1.6
SSH1YBR283C VHR2P40041 505 aa5.07□□□□□ -1.6
SSH1YBR283C DOT5P40553 215 aa5.07□□□□□ -1.6
SSH1YBR283C YGR273CP53329 174 aa5.07□□□□□ -1.6
SSH1YBR283C MSB4Q12317 492 aa5.07□□□□□ -1.6
SSH1YBR283C RLF2Q12495 606 aa5.07□□□□□ -1.6
SSH1YBR283C AUS1Q08409 1394 aa5.07□□□□□ -1.6
SSH1YBR283C FKS3Q04952 1785 aa5.07□□□□□ -1.6
SSH1YBR283C YRF1-3P0CX14 1859 aa5.07□□□□□ -1.6
SSH1YBR283C YRF1-7P0CX15 1859 aa5.07□□□□□ -1.6
SSH1YBR283C YRF1-6P53819 1859 aa5.07□□□□□ -1.6
SSH1YBR283C RSF2P46974 1380 aa5.07□□□□□ -1.6
SSH1YBR283C PCT1P13259 424 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms