RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C MRF1P30775 413 aaPredicted RBP5.47□□□□□ -1.53
SHG1YBR258C YPP1P46951 817 aa5.47□□□□□ -1.53
SHG1YBR258C YNL108CP53929 270 aa5.47□□□□□ -1.53
SHG1YBR258C MRX10Q05648 414 aa5.47□□□□□ -1.53
SHG1YBR258C HSL1P34244 1518 aa5.47□□□□□ -1.53
SHG1YBR258C ENO2P00925 437 aaKnown RBP5.46□□□□□ -1.54
SHG1YBR258C ERG12P07277 443 aa5.46□□□□□ -1.54
SHG1YBR258C YPR084WQ06821 456 aa5.46□□□□□ -1.54
SHG1YBR258C MCM16Q12262 181 aa5.46□□□□□ -1.54
SHG1YBR258C SIS2P36024 562 aa5.45□□□□□ -1.54
SHG1YBR258C XDJ1P39102 459 aa5.45□□□□□ -1.54
SHG1YBR258C FIG4P42837 879 aa5.45□□□□□ -1.54
SHG1YBR258C TEC1P18412 486 aa5.44□□□□□ -1.54
SHG1YBR258C VAC17P25591 423 aa5.44□□□□□ -1.54
SHG1YBR258C RTG2P32608 588 aaKnown RBP5.44□□□□□ -1.54
SHG1YBR258C MRX12P47084 519 aa5.44□□□□□ -1.54
SHG1YBR258C FRA1Q07825 749 aa5.44□□□□□ -1.54
SHG1YBR258C BNI1P41832 1953 aa5.44□□□□□ -1.54
SHG1YBR258C TTI1P36097 1038 aa5.43□□□□□ -1.54
SHG1YBR258C APL6P46682 809 aa5.43□□□□□ -1.54
SHG1YBR258C PEP1P32319 1579 aa5.42□□□□□ -1.54
SHG1YBR258C ENO1P00924 437 aaKnown RBP5.42□□□□□ -1.54
SHG1YBR258C YPR204WQ08995 1032 aa5.42□□□□□ -1.54
SHG1YBR258C RDS2P19541 446 aaKnown RBP5.41□□□□□ -1.54
SHG1YBR258C GUT2P32191 649 aa5.41□□□□□ -1.54
SHG1YBR258C PEP12P32854 288 aa5.41□□□□□ -1.54
SHG1YBR258C SUB2Q07478 446 aaKnown RBP5.4□□□□□ -1.54
SHG1YBR258C YEL077CQ3E7X8 1277 aa5.4□□□□□ -1.54
SHG1YBR258C SSA4P22202 642 aaKnown RBP5.39□□□□□ -1.55
SHG1YBR258C CST6P40535 587 aa5.39□□□□□ -1.55
SHG1YBR258C BDP1P46678 594 aa5.39□□□□□ -1.55
SHG1YBR258C UTP13Q05946 817 aaKnown RBP5.39□□□□□ -1.55
SHG1YBR258C AMS1P22855 1083 aa5.38□□□□□ -1.55
SHG1YBR258C EMP47P43555 445 aa5.38□□□□□ -1.55
SHG1YBR258C STE20Q03497 939 aaKnown RBP5.38□□□□□ -1.55
SHG1YBR258C ITT1Q04638 464 aa5.38□□□□□ -1.55
SHG1YBR258C TAF2P23255 1407 aa5.38□□□□□ -1.55
SHG1YBR258C ATG3P40344 310 aa5.37□□□□□ -1.55
SHG1YBR258C HIR3P47171 1648 aa5.36□□□□□ -1.55
SHG1YBR258C YCF1P39109 1515 aaKnown RBP5.35□□□□□ -1.55
SHG1YBR258C CPS1P27614 576 aa5.35□□□□□ -1.55
SHG1YBR258C ISF1P32488 338 aa5.35□□□□□ -1.55
SHG1YBR258C SYH1Q02875 849 aaKnown RBP5.35□□□□□ -1.55
SHG1YBR258C SSA1P10591 642 aaKnown RBP5.34□□□□□ -1.55
SHG1YBR258C MRT4P33201 236 aaKnown RBP5.34□□□□□ -1.55
SHG1YBR258C EMW1P42842 904 aaKnown RBP5.34□□□□□ -1.55
SHG1YBR258C PUP1P25043 261 aa5.33□□□□□ -1.56
SHG1YBR258C IXR1P33417 597 aa5.33□□□□□ -1.56
SHG1YBR258C FRK1Q03002 865 aaPredicted RBP5.33□□□□□ -1.56
SHG1YBR258C HED1Q03937 162 aa5.33□□□□□ -1.56
SHG1YBR258C PUS5Q06244 254 aa5.33□□□□□ -1.56
SHG1YBR258C MYO2P19524 1574 aaKnown RBP5.33□□□□□ -1.56
SHG1YBR258C TGL4P36165 910 aa5.32□□□□□ -1.56
SHG1YBR258C NOB1Q08444 459 aaKnown RBP5.32□□□□□ -1.56
SHG1YBR258C KIP2P28743 706 aa5.31□□□□□ -1.56
SHG1YBR258C LTE1P07866 1435 aa5.31□□□□□ -1.56
SHG1YBR258C GEF1P37020 779 aa5.3□□□□□ -1.56
SHG1YBR258C SOH1P38633 127 aa5.3□□□□□ -1.56
SHG1YBR258C ENV9Q08651 330 aa5.3□□□□□ -1.56
SHG1YBR258C IRC20Q06554 1556 aa5.29□□□□□ -1.56
SHG1YBR258C RAS1P01119 309 aa5.29□□□□□ -1.56
SHG1YBR258C GAL2P13181 574 aa5.29□□□□□ -1.56
SHG1YBR258C HAL5P38970 855 aaKnown RBP5.29□□□□□ -1.56
SHG1YBR258C RTT106P40161 455 aa5.29□□□□□ -1.56
SHG1YBR258C MMS1Q06211 1407 aa5.29□□□□□ -1.56
SHG1YBR258C CDC25P04821 1589 aa5.29□□□□□ -1.56
SHG1YBR258C YBL086CP38177 466 aa5.28□□□□□ -1.56
SHG1YBR258C ATG20Q07528 640 aa5.28□□□□□ -1.56
SHG1YBR258C DNF1P32660 1571 aa5.28□□□□□ -1.56
SHG1YBR258C RPA190P10964 1664 aaKnown RBP5.28□□□□□ -1.56
SHG1YBR258C SPT2P06843 333 aaPredicted RBP5.27□□□□□ -1.57
SHG1YBR258C PHO87P25360 923 aa5.27□□□□□ -1.57
SHG1YBR258C FBP26P32604 452 aa5.27□□□□□ -1.57
SHG1YBR258C ISR1Q06098 443 aaKnown RBP5.27□□□□□ -1.57
SHG1YBR258C CDC4P07834 779 aa5.26□□□□□ -1.57
SHG1YBR258C CLA4P48562 842 aa5.26□□□□□ -1.57
SHG1YBR258C YML083CQ04526 418 aa5.26□□□□□ -1.57
SHG1YBR258C MET32Q12041 191 aa5.26□□□□□ -1.57
SHG1YBR258C TSC13Q99190 310 aa5.26□□□□□ -1.57
SHG1YBR258C DPS1P04802 557 aaKnown RBP5.25□□□□□ -1.57
SHG1YBR258C STE6P12866 1290 aa5.25□□□□□ -1.57
SHG1YBR258C HAP4P14064 554 aa5.25□□□□□ -1.57
SHG1YBR258C MKS1P34072 584 aa5.25□□□□□ -1.57
SHG1YBR258C APP1P53933 587 aa5.25□□□□□ -1.57
SHG1YBR258C ISU1Q03020 165 aa5.25□□□□□ -1.57
SHG1YBR258C GAS4Q08271 471 aa5.25□□□□□ -1.57
SHG1YBR258C KTR7P40504 517 aa5.24□□□□□ -1.57
SHG1YBR258C YFL034WP43564 1073 aa5.24□□□□□ -1.57
SHG1YBR258C ACS2P52910 683 aaKnown RBP5.24□□□□□ -1.57
SHG1YBR258C HDA3Q06623 655 aa5.24□□□□□ -1.57
SHG1YBR258C AFT1P22149 690 aa5.23□□□□□ -1.57
SHG1YBR258C UBP1P25037 809 aa5.23□□□□□ -1.57
SHG1YBR258C MSB3P48566 633 aaPredicted RBP5.23□□□□□ -1.57
SHG1YBR258C ROM1P53046 1155 aa5.23□□□□□ -1.57
SHG1YBR258C ECM23Q02710 187 aa5.23□□□□□ -1.57
SHG1YBR258C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
SHG1YBR258C ATG2P53855 1592 aa5.23□□□□□ -1.57
SHG1YBR258C MET5P47169 1442 aa5.23□□□□□ -1.57
SHG1YBR258C AIM9P40053 627 aaKnown RBP5.22□□□□□ -1.57
SHG1YBR258C SLX8P40072 274 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms