RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	AAD14	P42884	376 aa		6.15	□□□□□ -1.42
CMD1	YBR109C	TAF7	Q05021	590 aa		6.15	□□□□□ -1.42
CMD1	YBR109C	SIT4	P20604	311 aa		6.14	□□□□□ -1.43
CMD1	YBR109C	IXR1	P33417	597 aa		6.14	□□□□□ -1.43
CMD1	YBR109C	YJR098C	P47139	656 aa		6.13	□□□□□ -1.43
CMD1	YBR109C	OSH7	P38755	437 aa		6.12	□□□□□ -1.43
CMD1	YBR109C	TCB1	Q12466	1186 aa		6.11	□□□□□ -1.43
CMD1	YBR109C	YFL066C	P43538	392 aa		6.09	□□□□□ -1.43
CMD1	YBR109C	ALR1	Q08269	859 aa		6.08	□□□□□ -1.44
CMD1	YBR109C	MAM3	Q12296	706 aa		6.08	□□□□□ -1.44
CMD1	YBR109C	DLD1	P32891	587 aa		6.07	□□□□□ -1.44
CMD1	YBR109C	RPA14	P50106	137 aa		6.07	□□□□□ -1.44
CMD1	YBR109C	THI72	Q08579	599 aa		6.07	□□□□□ -1.44
CMD1	YBR109C	SBP1	P10080	294 aa	Known RBP	6.06	□□□□□ -1.44
CMD1	YBR109C	YPR097W	Q06839	1073 aa		6.06	□□□□□ -1.44
CMD1	YBR109C	AI1	P03875	834 aa		6.05	□□□□□ -1.44
CMD1	YBR109C	IES2	P40154	320 aa		6.05	□□□□□ -1.44
CMD1	YBR109C	YNR021W	P53723	404 aa	Known RBP	6.05	□□□□□ -1.44
CMD1	YBR109C	YBL086C	P38177	466 aa		6.04	□□□□□ -1.44
CMD1	YBR109C	NUP42	P49686	430 aa	Known RBP	6.03	□□□□□ -1.44
CMD1	YBR109C	YPR053C	Q6Q5F3	151 aa		6.03	□□□□□ -1.44
CMD1	YBR109C	DIT2	P21595	489 aa		6.02	□□□□□ -1.45
CMD1	YBR109C	YDL206W	Q12424	762 aa		6.02	□□□□□ -1.45
CMD1	YBR109C	GLC3	P32775	704 aa		6	□□□□□ -1.45
CMD1	YBR109C	SLY41	P22215	453 aa		5.99	□□□□□ -1.45
CMD1	YBR109C	NIS1	P53939	407 aa		5.99	□□□□□ -1.45
CMD1	YBR109C	TBF1	Q02457	562 aa		5.98	□□□□□ -1.45
CMD1	YBR109C	KIN1	P13185	1064 aa		5.97	□□□□□ -1.45
CMD1	YBR109C	SKN7	P38889	622 aa		5.97	□□□□□ -1.45
CMD1	YBR109C	PUS6	P53294	404 aa		5.97	□□□□□ -1.45
CMD1	YBR109C	TEA1	P47988	759 aa		5.96	□□□□□ -1.46
CMD1	YBR109C	DMA2	P53924	522 aa		5.96	□□□□□ -1.46
CMD1	YBR109C	NAM8	Q00539	523 aa	Known RBP	5.96	□□□□□ -1.46
CMD1	YBR109C	AIM7	Q12156	149 aa		5.96	□□□□□ -1.46
CMD1	YBR109C	CDC19	P00549	500 aa	Known RBP	5.93	□□□□□ -1.46
CMD1	YBR109C	VAC17	P25591	423 aa		5.92	□□□□□ -1.46
CMD1	YBR109C	ATF2	P53296	535 aa		5.91	□□□□□ -1.46
CMD1	YBR109C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
CMD1	YBR109C	CUZ1	P53899	274 aa		5.89	□□□□□ -1.47
CMD1	YBR109C	TRM1	P15565	570 aa	Known RBP	5.88	□□□□□ -1.47
CMD1	YBR109C	EMW1	P42842	904 aa	Known RBP	5.88	□□□□□ -1.47
CMD1	YBR109C	FPK1	P53739	893 aa		5.88	□□□□□ -1.47
CMD1	YBR109C	YMR187C	Q03236	431 aa		5.88	□□□□□ -1.47
CMD1	YBR109C	CEM1	P39525	442 aa		5.87	□□□□□ -1.47
CMD1	YBR109C	TDA6	Q06466	467 aa		5.87	□□□□□ -1.47
CMD1	YBR109C	APP1	P53933	587 aa		5.86	□□□□□ -1.47
CMD1	YBR109C	GUA1	P38625	525 aa	Known RBP	5.85	□□□□□ -1.47
CMD1	YBR109C	SBE2	P42223	864 aa	Known RBP	5.85	□□□□□ -1.47
CMD1	YBR109C	ADE12	P80210	433 aa	Known RBP	5.85	□□□□□ -1.47
CMD1	YBR109C	YMR196W	Q04336	1088 aa		5.85	□□□□□ -1.47
CMD1	YBR109C	VTC4	P47075	721 aa		5.84	□□□□□ -1.47
CMD1	YBR109C	GLT1	Q12680	2145 aa	Known RBP	5.82	□□□□□ -1.48
CMD1	YBR109C	HPC2	Q01448	625 aa		5.79	□□□□□ -1.48
CMD1	YBR109C	ITT1	Q04638	464 aa		5.79	□□□□□ -1.48
CMD1	YBR109C	DFG5	Q05031	458 aa		5.79	□□□□□ -1.48
CMD1	YBR109C	MKS1	P34072	584 aa		5.78	□□□□□ -1.48
CMD1	YBR109C	MCX1	P38323	520 aa	Predicted RBP	5.78	□□□□□ -1.48
CMD1	YBR109C	SYT1	Q06836	1226 aa		5.78	□□□□□ -1.48
CMD1	YBR109C	CSN12	P47130	423 aa		5.76	□□□□□ -1.49
CMD1	YBR109C	HGH1	P48362	394 aa	Known RBP	5.76	□□□□□ -1.49
CMD1	YBR109C	YCK2	P23292	546 aa	Known RBP	5.75	□□□□□ -1.49
CMD1	YBR109C	SCJ1	P25303	377 aa		5.75	□□□□□ -1.49
CMD1	YBR109C	HST2	P53686	357 aa		5.75	□□□□□ -1.49
CMD1	YBR109C	TFB3	Q03290	321 aa		5.75	□□□□□ -1.49
CMD1	YBR109C	BDS1	Q08347	646 aa		5.75	□□□□□ -1.49
CMD1	YBR109C	SSA2	P10592	639 aa	Known RBP	5.74	□□□□□ -1.49
CMD1	YBR109C	DAL1	P32375	460 aa		5.74	□□□□□ -1.49
CMD1	YBR109C	AMN1	P38285	549 aa	Predicted RBP	5.74	□□□□□ -1.49
CMD1	YBR109C	RLF2	Q12495	606 aa		5.74	□□□□□ -1.49
CMD1	YBR109C	DIT1	P21623	536 aa		5.73	□□□□□ -1.49
CMD1	YBR109C	KTR1	P27810	393 aa	Known RBP	5.73	□□□□□ -1.49
CMD1	YBR109C	YNR014W	P53719	212 aa		5.73	□□□□□ -1.49
CMD1	YBR109C	IRC24	P40580	263 aa		5.72	□□□□□ -1.49
CMD1	YBR109C	YMR265C	Q03508	461 aa	Known RBP	5.72	□□□□□ -1.49
CMD1	YBR109C	YDR461C-A	Q2V2P7	80 aa		5.72	□□□□□ -1.49
CMD1	YBR109C	MAC1	P35192	417 aa		5.71	□□□□□ -1.5
CMD1	YBR109C	BRL1	P38770	471 aa		5.71	□□□□□ -1.5
CMD1	YBR109C	YDR215C	Q12240	137 aa		5.71	□□□□□ -1.5
CMD1	YBR109C	PKC1	P24583	1151 aa		5.7	□□□□□ -1.5
CMD1	YBR109C	MMP1	Q12372	583 aa		5.7	□□□□□ -1.5
CMD1	YBR109C	STE6	P12866	1290 aa		5.69	□□□□□ -1.5
CMD1	YBR109C	FBP26	P32604	452 aa		5.69	□□□□□ -1.5
CMD1	YBR109C	LSB6	P42951	607 aa		5.68	□□□□□ -1.5
CMD1	YBR109C	KRE33	P53914	1056 aa	Known RBP	5.68	□□□□□ -1.5
CMD1	YBR109C	GLN1	P32288	370 aa	Known RBP	5.67	□□□□□ -1.5
CMD1	YBR109C	UBP15	P50101	1230 aa		5.67	□□□□□ -1.5
CMD1	YBR109C	SLN1	P39928	1220 aa	Predicted RBP	5.66	□□□□□ -1.5
CMD1	YBR109C	MCA1	Q08601	432 aa		5.66	□□□□□ -1.5
CMD1	YBR109C	ESS1	P22696	170 aa		5.65	□□□□□ -1.5
CMD1	YBR109C	BOI2	P39969	1040 aa		5.64	□□□□□ -1.51
CMD1	YBR109C	PKH3	Q03306	898 aa	Predicted RBP	5.64	□□□□□ -1.51
CMD1	YBR109C	FIG4	P42837	879 aa		5.63	□□□□□ -1.51
CMD1	YBR109C	YPL034W	Q03083	165 aa		5.63	□□□□□ -1.51
CMD1	YBR109C	GPM1	P00950	247 aa	Known RBP	5.62	□□□□□ -1.51
CMD1	YBR109C	YJU3	P28321	313 aa		5.62	□□□□□ -1.51
CMD1	YBR109C	RSC30	P38781	883 aa		5.62	□□□□□ -1.51
CMD1	YBR109C	RAD59	Q12223	238 aa		5.62	□□□□□ -1.51
CMD1	YBR109C	BIM1	P40013	344 aa		5.61	□□□□□ -1.51
CMD1	YBR109C	YJL007C	P47080	104 aa		5.61	□□□□□ -1.51
CMD1	YBR109C	YBL036C	P38197	257 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms