RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 CCDC141Q6ZP82 1450 aa13.78□□□□□ -0.2
SAMMSON-218ENST00000641601 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.2
SAMMSON-218ENST00000641601 SAMD9LQ8IVG5 1584 aa13.77□□□□□ -0.2
SAMMSON-218ENST00000641601 MAST1Q9Y2H9 1570 aa13.77□□□□□ -0.2
SAMMSON-218ENST00000641601 UNC13BO14795 1591 aa13.76□□□□□ -0.21
SAMMSON-218ENST00000641601 TRPM1Q7Z4N2 1603 aa13.76□□□□□ -0.21
SAMMSON-218ENST00000641601 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
SAMMSON-218ENST00000641601 NUDCQ9Y266 331 aa13.76□□□□□ -0.21
SAMMSON-218ENST00000641601 FAM135AQ9P2D6 1515 aa13.75□□□□□ -0.21
SAMMSON-218ENST00000641601 MSH5O43196 834 aa13.75□□□□□ -0.21
SAMMSON-218ENST00000641601 RSPH4AQ5TD94 716 aa13.75□□□□□ -0.21
SAMMSON-218ENST00000641601 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
SAMMSON-218ENST00000641601 LAMC1P11047 1609 aa13.75□□□□□ -0.21
SAMMSON-218ENST00000641601 ERCC6L2Q5T890 1561 aa13.74□□□□□ -0.21
SAMMSON-218ENST00000641601 PNISRQ8TF01 805 aaKnown RBP13.74□□□□□ -0.21
SAMMSON-218ENST00000641601 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
SAMMSON-218ENST00000641601 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
SAMMSON-218ENST00000641601 PLXNC1O60486 1568 aa13.71□□□□□ -0.21
SAMMSON-218ENST00000641601 RALBP1Q15311 655 aa13.71□□□□□ -0.21
SAMMSON-218ENST00000641601 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.22
SAMMSON-218ENST00000641601 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 HNRNPMP52272 730 aaKnown RBP eCLIP13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 POLR3GLQ9BT43 218 aa13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 PRAG1Q86YV5 1406 aa13.7□□□□□ -0.22
SAMMSON-218ENST00000641601 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
SAMMSON-218ENST00000641601 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
SAMMSON-218ENST00000641601 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
SAMMSON-218ENST00000641601 EIF2AK4Q9P2K8 1649 aaKnown RBP13.68□□□□□ -0.22
SAMMSON-218ENST00000641601 DCAF11Q8TEB1 546 aa13.68□□□□□ -0.22
SAMMSON-218ENST00000641601 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
SAMMSON-218ENST00000641601 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
SAMMSON-218ENST00000641601 PLEKHH2Q8IVE3 1493 aa13.67□□□□□ -0.22
SAMMSON-218ENST00000641601 SYCP2Q9BX26 1530 aa13.67□□□□□ -0.22
SAMMSON-218ENST00000641601 TTC37Q6PGP7 1564 aa13.66□□□□□ -0.22
SAMMSON-218ENST00000641601 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
SAMMSON-218ENST00000641601 ATP10AO60312 1499 aa13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 ZMYM4Q5VZL5 1548 aa13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 PARD3Q8TEW0 1356 aa13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 MAGI2Q86UL8 1455 aa13.65□□□□□ -0.22
SAMMSON-218ENST00000641601 ARHGAP5Q13017 1502 aa13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 INSRP06213 1382 aa13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 ERICH6Q7L0X2 663 aa13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 A2MP01023 1474 aa13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
SAMMSON-218ENST00000641601 DUOX2Q9NRD8 1548 aa13.63□□□□□ -0.23
SAMMSON-218ENST00000641601 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
SAMMSON-218ENST00000641601 NLRP13Q86W25 1043 aa13.62□□□□□ -0.23
SAMMSON-218ENST00000641601 CCDC136Q96JN2 1154 aa13.62□□□□□ -0.23
SAMMSON-218ENST00000641601 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
SAMMSON-218ENST00000641601 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
SAMMSON-218ENST00000641601 PDE3BQ13370 1112 aa13.6□□□□□ -0.23
SAMMSON-218ENST00000641601 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
SAMMSON-218ENST00000641601 ERBINQ96RT1 1412 aa13.6□□□□□ -0.23
SAMMSON-218ENST00000641601 MYT1LQ9UL68 1186 aa13.6□□□□□ -0.23
SAMMSON-218ENST00000641601 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
SAMMSON-218ENST00000641601 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
SAMMSON-218ENST00000641601 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
SAMMSON-218ENST00000641601 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
SAMMSON-218ENST00000641601 NBPF1Q3BBV0 1214 aa13.55□□□□□ -0.24
SAMMSON-218ENST00000641601 TESK2Q96S53 571 aa13.55□□□□□ -0.24
SAMMSON-218ENST00000641601 IQGAP1P46940 1657 aa13.54□□□□□ -0.24
SAMMSON-218ENST00000641601 PLCH2O75038 1416 aa13.54□□□□□ -0.24
SAMMSON-218ENST00000641601 ABCC1P33527 1531 aa13.54□□□□□ -0.24
SAMMSON-218ENST00000641601 DISP3Q9P2K9 1392 aa13.54□□□□□ -0.24
SAMMSON-218ENST00000641601 RCAN3Q9UKA8 241 aa13.53□□□□□ -0.24
SAMMSON-218ENST00000641601 MADDQ8WXG6 1647 aa13.53□□□□□ -0.24
SAMMSON-218ENST00000641601 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
SAMMSON-218ENST00000641601 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
SAMMSON-218ENST00000641601 ZCCHC11Q5TAX3 1644 aaKnown RBP13.52□□□□□ -0.24
SAMMSON-218ENST00000641601 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.24
SAMMSON-218ENST00000641601 CEP152O94986 1710 aa13.52□□□□□ -0.25
SAMMSON-218ENST00000641601 SPHKAPQ2M3C7 1700 aa13.52□□□□□ -0.25
SAMMSON-218ENST00000641601 NOP58Q9Y2X3 529 aaKnown RBP13.52□□□□□ -0.25
SAMMSON-218ENST00000641601 TMF1P82094 1093 aa13.51□□□□□ -0.25
SAMMSON-218ENST00000641601 ARAP3Q8WWN8 1544 aa13.51□□□□□ -0.25
SAMMSON-218ENST00000641601 PLPPR3Q6T4P5 718 aa13.5□□□□□ -0.25
SAMMSON-218ENST00000641601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.25
SAMMSON-218ENST00000641601 TRPM2O94759 1503 aa13.5□□□□□ -0.25
SAMMSON-218ENST00000641601 DEPDC5O75140 1603 aa13.5□□□□□ -0.25
SAMMSON-218ENST00000641601 STAC3Q96MF2 364 aa13.49□□□□□ -0.25
SAMMSON-218ENST00000641601 ANP32AP39687 249 aaKnown RBP13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 BCL11AQ9H165 835 aa13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 PANK3Q9H999 370 aa13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 RTEL1-TNFRSF6BF6WH68 1400 aa13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 SYNMO15061 1565 aa13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 EFCAB2Q5VUJ9 269 aa13.48□□□□□ -0.25
SAMMSON-218ENST00000641601 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 NEURL4Q96JN8 1562 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 SCAPERQ9BY12 1400 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 EXOC6Q8TAG9 804 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 IPO9Q96P70 1041 aaKnown RBP13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 TET3O43151 1660 aa13.47□□□□□ -0.25
SAMMSON-218ENST00000641601 SENP3-EIF4A1A0A087X0R7 540 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms