RNA–Protein interactions for RNA: ENST00000640791.1

SCN2A-218, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,169 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-218ENST00000640791 TONSLQ96HA7 1378 aa2.59□□□□□ -1.99
SCN2A-218ENST00000640791 NPATQ14207 1427 aa2.59□□□□□ -1.99
SCN2A-218ENST00000640791 GOLGA6L22H0YM25 854 aa2.59□□□□□ -1.99
SCN2A-218ENST00000640791 EFCAB5A4FU69 1503 aa2.59□□□□□ -1.99
SCN2A-218ENST00000640791 DIP2AQ14689 1571 aa2.59□□□□□ -1.99
SCN2A-218ENST00000640791 ATP1B4Q9UN42 357 aaPredicted RBP2.59□□□□□ -1.99
SCN2A-218ENST00000640791 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.59□□□□□ -2
SCN2A-218ENST00000640791 DIP2CQ9Y2E4 1556 aa2.59□□□□□ -2
SCN2A-218ENST00000640791 GOLGA6L6A8MZA4 724 aa2.59□□□□□ -2
SCN2A-218ENST00000640791 PTPN23Q9H3S7 1636 aa2.59□□□□□ -2
SCN2A-218ENST00000640791 CANXP27824 592 aaKnown RBP2.58□□□□□ -2
SCN2A-218ENST00000640791 CUL7Q14999 1698 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 KIF21BO75037 1637 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 TNNT2P45379 298 aaPredicted RBP2.58□□□□□ -2
SCN2A-218ENST00000640791 TRIM52Q96A61 297 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 PNNQ9H307 717 aaKnown RBP2.58□□□□□ -2
SCN2A-218ENST00000640791 RYR3Q15413 4870 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 BCL9LQ86UU0 1499 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 NCOA3Q9Y6Q9 1424 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 KDM4FA0A1W2PPD8 638 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 NGEFQ8N5V2 710 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 CHMP4CQ96CF2 233 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 CD109Q6YHK3 1445 aa2.58□□□□□ -2
SCN2A-218ENST00000640791 CFAP43Q8NDM7 1665 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 PLCH2O75038 1416 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 OSCARQ8IYS5 282 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 TRPM1Q7Z4N2 1603 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.57□□□□□ -2
SCN2A-218ENST00000640791 AAMPQ13685 434 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 HNRNPUL2Q1KMD3 747 aaKnown RBP2.57□□□□□ -2
SCN2A-218ENST00000640791 ANO8Q9HCE9 1232 aaPredicted RBP2.57□□□□□ -2
SCN2A-218ENST00000640791 KDM5AP29375 1690 aaKnown RBP2.57□□□□□ -2
SCN2A-218ENST00000640791 BCL9O00512 1426 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 NCOA1Q15788 1441 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 STAC3Q96MF2 364 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 ARHGAP35Q9NRY4 1499 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 ABCC1P33527 1531 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 NRDCO43847 1150 aa2.57□□□□□ -2
SCN2A-218ENST00000640791 SSH2Q76I76 1423 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
SCN2A-218ENST00000640791 MYO5CQ9NQX4 1742 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 WWC1Q8IX03 1113 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 CFAP53Q96M91 514 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 MYH16Q9H6N6 1097 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 KAT6AQ92794 2004 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 CASC1Q6TDU7 716 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 IL27Q8NEV9 243 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 HMCN2Q8NDA2 5059 aa2.56□□□□□ -2
SCN2A-218ENST00000640791 ROCK2O75116 1388 aaKnown RBP2.56□□□□□ -2
SCN2A-218ENST00000640791 POLR1AO95602 1720 aaPredicted RBP2.56□□□□□ -2
SCN2A-218ENST00000640791 FAM50AQ14320 339 aaKnown RBP2.55□□□□□ -2
SCN2A-218ENST00000640791 HDAC5Q9UQL6 1122 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 CACNA1FO60840 1977 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 KCPQ6ZWJ8 1503 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 DEPDC5O75140 1603 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 TDRD9Q8NDG6 1382 aaKnown RBP2.55□□□□□ -2
SCN2A-218ENST00000640791 CEP290O15078 2479 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 PPP4R2Q9NY27 417 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 PDE3BQ13370 1112 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 GTF3C3Q9Y5Q9 886 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 HTATSF1O43719 755 aaKnown RBP2.55□□□□□ -2
SCN2A-218ENST00000640791 AKAP11Q9UKA4 1901 aa2.55□□□□□ -2
SCN2A-218ENST00000640791 CCDC88AQ3V6T2 1871 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 ZFYVE16Q7Z3T8 1539 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 PHF23Q9BUL5 403 aaPredicted RBP2.54□□□□□ -2
SCN2A-218ENST00000640791 PTPRMP28827 1452 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 FOXD1Q16676 465 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 PREX1Q8TCU6 1659 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 RNF17Q9BXT8 1623 aaKnown RBP2.54□□□□□ -2
SCN2A-218ENST00000640791 ADGRB1O14514 1584 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 DHX8Q14562 1220 aaKnown RBP2.54□□□□□ -2
SCN2A-218ENST00000640791 EHMT2Q96KQ7 1210 aa2.54□□□□□ -2
SCN2A-218ENST00000640791 WDR43Q15061 677 aaKnown RBP eCLIP2.54□□□□□ -2
SCN2A-218ENST00000640791 NPM1P06748 294 aaKnown RBP eCLIP2.54□□□□□ -2
SCN2A-218ENST00000640791 CDK11BP21127 795 aaKnown RBP2.54□□□□□ -2
SCN2A-218ENST00000640791 CHD2O14647 1828 aaKnown RBP2.54□□□□□ -2
SCN2A-218ENST00000640791 SYCP2Q9BX26 1530 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 EIF4G2P78344 907 aaKnown RBP eCLIP2.53□□□□□ -2
SCN2A-218ENST00000640791 CALD1Q05682 793 aaKnown RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 RANGAP1P46060 587 aaPredicted RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 LCE2DQ5TA82 110 aaPredicted RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 HDGFP51858 240 aaKnown RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 LAS1LQ9Y4W2 734 aaKnown RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 KTN1Q86UP2 1357 aaKnown RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 VPS8Q8N3P4 1428 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 RSPH4AQ5TD94 716 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 NUDCQ9Y266 331 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 EIF3AQ14152 1382 aaKnown RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 PLEKHH2Q8IVE3 1493 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 TSPY4P0CV99 314 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 TSPY10P0CW01 314 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 TRHP20396 242 aaPredicted RBP2.53□□□□□ -2
SCN2A-218ENST00000640791 CCNB3Q8WWL7 1395 aa2.53□□□□□ -2
SCN2A-218ENST00000640791 ZNF142P52746 1687 aaPredicted RBP2.53□□□□□ -2.01
SCN2A-218ENST00000640791 ADAMTS13Q76LX8 1427 aa2.53□□□□□ -2.01
SCN2A-218ENST00000640791 PRKCSHP14314 528 aaPredicted RBP2.53□□□□□ -2.01
SCN2A-218ENST00000640791 CSPP1Q1MSJ5 1256 aa2.53□□□□□ -2.01
SCN2A-218ENST00000640791 ARHGEF5Q12774 1597 aa2.52□□□□□ -2.01
SCN2A-218ENST00000640791 FAT4Q6V0I7 4981 aa2.52□□□□□ -2.01
SCN2A-218ENST00000640791 BAZ2BQ9UIF8 2168 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms