RNA–Protein interactions for RNA: ENST00000640099.1

NECAP1-224, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,313 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-224ENST00000640099 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
NECAP1-224ENST00000640099 PPP4R2Q9NY27 417 aa10.38□□□□□ -0.75
NECAP1-224ENST00000640099 RALGAPBQ86X10 1494 aa10.37□□□□□ -0.75
NECAP1-224ENST00000640099 KDM5CP41229 1560 aa10.37□□□□□ -0.75
NECAP1-224ENST00000640099 PNISRQ8TF01 805 aaKnown RBP10.37□□□□□ -0.75
NECAP1-224ENST00000640099 CDC42BPBQ9Y5S2 1711 aa10.37□□□□□ -0.75
NECAP1-224ENST00000640099 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
NECAP1-224ENST00000640099 EFCAB2Q5VUJ9 269 aa10.36□□□□□ -0.75
NECAP1-224ENST00000640099 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.36□□□□□ -0.75
NECAP1-224ENST00000640099 UHRF1BP1Q6BDS2 1440 aa10.36□□□□□ -0.75
NECAP1-224ENST00000640099 ARHGEF12Q9NZN5 1544 aa10.35□□□□□ -0.75
NECAP1-224ENST00000640099 PLA2R1Q13018 1463 aa10.35□□□□□ -0.75
NECAP1-224ENST00000640099 TRAPPC8Q9Y2L5 1435 aa10.34□□□□□ -0.75
NECAP1-224ENST00000640099 NUDCQ9Y266 331 aa10.34□□□□□ -0.75
NECAP1-224ENST00000640099 PREX2Q70Z35 1606 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 PANK3Q9H999 370 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 ARHGEF5Q12774 1597 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
NECAP1-224ENST00000640099 ANP32EQ9BTT0 268 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 PRAG1Q86YV5 1406 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 DISP3Q9P2K9 1392 aa10.33□□□□□ -0.76
NECAP1-224ENST00000640099 MYBBP1AQ9BQG0 1328 aaKnown RBP10.32□□□□□ -0.76
NECAP1-224ENST00000640099 A2MP01023 1474 aa10.32□□□□□ -0.76
NECAP1-224ENST00000640099 ARID4BQ4LE39 1312 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-224ENST00000640099 ABCC2Q92887 1545 aa10.31□□□□□ -0.76
NECAP1-224ENST00000640099 KDM5DQ9BY66 1539 aa10.31□□□□□ -0.76
NECAP1-224ENST00000640099 MSH5O43196 834 aa10.31□□□□□ -0.76
NECAP1-224ENST00000640099 KIF3BO15066 747 aa10.31□□□□□ -0.76
NECAP1-224ENST00000640099 CCDC136Q96JN2 1154 aa10.3□□□□□ -0.76
NECAP1-224ENST00000640099 RALBP1Q15311 655 aa10.3□□□□□ -0.76
NECAP1-224ENST00000640099 TESK2Q96S53 571 aa10.3□□□□□ -0.76
NECAP1-224ENST00000640099 KTN1Q86UP2 1357 aaKnown RBP10.3□□□□□ -0.76
NECAP1-224ENST00000640099 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
NECAP1-224ENST00000640099 PLCH2O75038 1416 aa10.29□□□□□ -0.76
NECAP1-224ENST00000640099 CHGAP10645 457 aaKnown RBP10.29□□□□□ -0.76
NECAP1-224ENST00000640099 POLR1AO95602 1720 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-224ENST00000640099 TMF1P82094 1093 aa10.28□□□□□ -0.76
NECAP1-224ENST00000640099 SMG6Q86US8 1419 aaKnown RBP10.28□□□□□ -0.76
NECAP1-224ENST00000640099 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-224ENST00000640099 NLRP13Q86W25 1043 aa10.28□□□□□ -0.76
NECAP1-224ENST00000640099 MYT1Q01538 1121 aa10.27□□□□□ -0.76
NECAP1-224ENST00000640099 BRD4O60885 1362 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-224ENST00000640099 PLIN1O60240 522 aa10.26□□□□□ -0.77
NECAP1-224ENST00000640099 ERBINQ96RT1 1412 aa10.26□□□□□ -0.77
NECAP1-224ENST00000640099 ERICH6BQ5W0A0 696 aa10.26□□□□□ -0.77
NECAP1-224ENST00000640099 MYO5CQ9NQX4 1742 aa10.26□□□□□ -0.77
NECAP1-224ENST00000640099 SCAPERQ9BY12 1400 aa10.26□□□□□ -0.77
NECAP1-224ENST00000640099 ERICH6Q7L0X2 663 aa10.25□□□□□ -0.77
NECAP1-224ENST00000640099 ZCCHC11Q5TAX3 1644 aaKnown RBP10.25□□□□□ -0.77
NECAP1-224ENST00000640099 SHROOM2Q13796 1616 aa10.25□□□□□ -0.77
NECAP1-224ENST00000640099 DUOX2Q9NRD8 1548 aa10.25□□□□□ -0.77
NECAP1-224ENST00000640099 EXOC6Q8TAG9 804 aa10.25□□□□□ -0.77
NECAP1-224ENST00000640099 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
NECAP1-224ENST00000640099 CFAP70Q5T0N1 1121 aa10.24□□□□□ -0.77
NECAP1-224ENST00000640099 RCAN3Q9UKA8 241 aa10.23□□□□□ -0.77
NECAP1-224ENST00000640099 KNSTRNQ9Y448 316 aa10.23□□□□□ -0.77
NECAP1-224ENST00000640099 LRPPRCP42704 1394 aaKnown RBP10.23□□□□□ -0.77
NECAP1-224ENST00000640099 NUTM2DQ5VT03 806 aaPredicted RBP10.23□□□□□ -0.77
NECAP1-224ENST00000640099 PARD3Q8TEW0 1356 aa10.23□□□□□ -0.77
NECAP1-224ENST00000640099 UNC13BO14795 1591 aa10.23□□□□□ -0.77
NECAP1-224ENST00000640099 GGT6Q6P531 493 aa10.22□□□□□ -0.77
NECAP1-224ENST00000640099 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
NECAP1-224ENST00000640099 GPRASP1Q5JY77 1395 aa10.22□□□□□ -0.77
NECAP1-224ENST00000640099 COL17A1Q9UMD9 1497 aaPredicted RBP10.22□□□□□ -0.77
NECAP1-224ENST00000640099 RRP1P56182 461 aaKnown RBP10.22□□□□□ -0.77
NECAP1-224ENST00000640099 SKAP1Q86WV1 359 aa10.21□□□□□ -0.77
NECAP1-224ENST00000640099 MAST1Q9Y2H9 1570 aa10.21□□□□□ -0.78
NECAP1-224ENST00000640099 ABCC1P33527 1531 aa10.21□□□□□ -0.78
NECAP1-224ENST00000640099 CCDC146Q8IYE0 955 aa10.21□□□□□ -0.78
NECAP1-224ENST00000640099 IQGAP3Q86VI3 1631 aa10.21□□□□□ -0.78
NECAP1-224ENST00000640099 ADGRF5Q8IZF2 1346 aa10.2□□□□□ -0.78
NECAP1-224ENST00000640099 FANCAO15360 1455 aa10.2□□□□□ -0.78
NECAP1-224ENST00000640099 PLXNC1O60486 1568 aa10.2□□□□□ -0.78
NECAP1-224ENST00000640099 TNNT2P45379 298 aaPredicted RBP10.2□□□□□ -0.78
NECAP1-224ENST00000640099 WDR43Q15061 677 aaKnown RBP eCLIP10.19□□□□□ -0.78
NECAP1-224ENST00000640099 UGGT1Q9NYU2 1555 aa10.19□□□□□ -0.78
NECAP1-224ENST00000640099 RNF123Q5XPI4 1314 aa10.19□□□□□ -0.78
NECAP1-224ENST00000640099 KANK1Q14678 1352 aa10.19□□□□□ -0.78
NECAP1-224ENST00000640099 ATP10AO60312 1499 aa10.19□□□□□ -0.78
NECAP1-224ENST00000640099 PPP2R1AP30153 589 aa10.18□□□□□ -0.78
NECAP1-224ENST00000640099 NPM2Q86SE8 214 aaKnown RBP10.18□□□□□ -0.78
NECAP1-224ENST00000640099 CLASP1Q7Z460 1538 aa10.18□□□□□ -0.78
NECAP1-224ENST00000640099 NPM1P06748 294 aaKnown RBP eCLIP10.18□□□□□ -0.78
NECAP1-224ENST00000640099 PRDM15P57071 1507 aaPredicted RBP10.18□□□□□ -0.78
NECAP1-224ENST00000640099 ADGRL1O94910 1474 aa10.18□□□□□ -0.78
NECAP1-224ENST00000640099 MAGI2Q86UL8 1455 aa10.18□□□□□ -0.78
NECAP1-224ENST00000640099 TRAK1Q9UPV9 953 aa10.17□□□□□ -0.78
NECAP1-224ENST00000640099 FANCIQ9NVI1 1328 aa10.17□□□□□ -0.78
NECAP1-224ENST00000640099 WDR7Q9Y4E6 1490 aa10.17□□□□□ -0.78
NECAP1-224ENST00000640099 TMEM132EQ6IEE7 984 aa10.17□□□□□ -0.78
NECAP1-224ENST00000640099 ASXL2Q76L83 1435 aa10.16□□□□□ -0.78
NECAP1-224ENST00000640099 AMER1Q5JTC6 1135 aaPredicted RBP10.16□□□□□ -0.78
NECAP1-224ENST00000640099 C20orf194Q5TEA3 1177 aa10.16□□□□□ -0.78
NECAP1-224ENST00000640099 E9PCH4 1651 aa10.16□□□□□ -0.78
NECAP1-224ENST00000640099 ZFYVE16Q7Z3T8 1539 aa10.16□□□□□ -0.78
NECAP1-224ENST00000640099 UHRF1BP1LA0JNW5 1464 aa10.16□□□□□ -0.78
NECAP1-224ENST00000640099 SAFB2Q14151 953 aaKnown RBP eCLIP10.15□□□□□ -0.78
NECAP1-224ENST00000640099 CRBNQ96SW2 442 aa10.15□□□□□ -0.78
NECAP1-224ENST00000640099 RAPGEF3O95398 923 aa10.15□□□□□ -0.79
NECAP1-224ENST00000640099 PAK3O75914 559 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms