RNA–Protein interactions for RNA: ENST00000640021.1

NOTCH2-208, Transcript of notch 2, humanhuman

TSL 5

Gene NOTCH2, Length 2,058 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH2-208ENST00000640021 CHD1O14646 1710 aa16.73■□□□□ 0.27
NOTCH2-208ENST00000640021 ARHGAP5Q13017 1502 aa16.72■□□□□ 0.27
NOTCH2-208ENST00000640021 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
NOTCH2-208ENST00000640021 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
NOTCH2-208ENST00000640021 UNC13BO14795 1591 aa16.72■□□□□ 0.27
NOTCH2-208ENST00000640021 RALBP1Q15311 655 aa16.71■□□□□ 0.27
NOTCH2-208ENST00000640021 SYCP2Q9BX26 1530 aa16.71■□□□□ 0.27
NOTCH2-208ENST00000640021 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
NOTCH2-208ENST00000640021 PNISRQ8TF01 805 aaKnown RBP16.71■□□□□ 0.27
NOTCH2-208ENST00000640021 SHROOM2Q13796 1616 aa16.71■□□□□ 0.26
NOTCH2-208ENST00000640021 FANCIQ9NVI1 1328 aa16.7■□□□□ 0.26
NOTCH2-208ENST00000640021 TRPM1Q7Z4N2 1603 aa16.7■□□□□ 0.26
NOTCH2-208ENST00000640021 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
NOTCH2-208ENST00000640021 E9PCH4 1651 aa16.7■□□□□ 0.26
NOTCH2-208ENST00000640021 MYBBP1AQ9BQG0 1328 aaKnown RBP16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 PLXNC1O60486 1568 aa16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 TTC37Q6PGP7 1564 aa16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
NOTCH2-208ENST00000640021 B4GALNT3Q6L9W6 998 aa16.66■□□□□ 0.26
NOTCH2-208ENST00000640021 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
NOTCH2-208ENST00000640021 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
NOTCH2-208ENST00000640021 LAMC1P11047 1609 aa16.65■□□□□ 0.26
NOTCH2-208ENST00000640021 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.26
NOTCH2-208ENST00000640021 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
NOTCH2-208ENST00000640021 DUOX2Q9NRD8 1548 aa16.64■□□□□ 0.25
NOTCH2-208ENST00000640021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
NOTCH2-208ENST00000640021 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
NOTCH2-208ENST00000640021 EIF2AK4Q9P2K8 1649 aaKnown RBP16.63■□□□□ 0.25
NOTCH2-208ENST00000640021 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
NOTCH2-208ENST00000640021 PLA2R1Q13018 1463 aa16.62■□□□□ 0.25
NOTCH2-208ENST00000640021 ERBINQ96RT1 1412 aa16.61■□□□□ 0.25
NOTCH2-208ENST00000640021 ATP10AO60312 1499 aa16.61■□□□□ 0.25
NOTCH2-208ENST00000640021 A2MP01023 1474 aa16.61■□□□□ 0.25
NOTCH2-208ENST00000640021 WASHC2CQ9Y4E1 1318 aa16.6■□□□□ 0.25
NOTCH2-208ENST00000640021 NLRP13Q86W25 1043 aa16.6■□□□□ 0.25
NOTCH2-208ENST00000640021 PRDM15P57071 1507 aaPredicted RBP16.59■□□□□ 0.25
NOTCH2-208ENST00000640021 MAGI2Q86UL8 1455 aa16.59■□□□□ 0.25
NOTCH2-208ENST00000640021 PLCH2O75038 1416 aa16.58■□□□□ 0.24
NOTCH2-208ENST00000640021 PARD3Q8TEW0 1356 aa16.58■□□□□ 0.24
NOTCH2-208ENST00000640021 MSH5O43196 834 aa16.58■□□□□ 0.24
NOTCH2-208ENST00000640021 NBPF1Q3BBV0 1214 aa16.58■□□□□ 0.24
NOTCH2-208ENST00000640021 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
NOTCH2-208ENST00000640021 COL17A1Q9UMD9 1497 aaPredicted RBP16.57■□□□□ 0.24
NOTCH2-208ENST00000640021 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
NOTCH2-208ENST00000640021 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
NOTCH2-208ENST00000640021 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
NOTCH2-208ENST00000640021 PER1O15534 1290 aaPredicted RBP16.55■□□□□ 0.24
NOTCH2-208ENST00000640021 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
NOTCH2-208ENST00000640021 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
NOTCH2-208ENST00000640021 TMF1P82094 1093 aa16.54■□□□□ 0.24
NOTCH2-208ENST00000640021 UHRF1BP1LA0JNW5 1464 aa16.53■□□□□ 0.24
NOTCH2-208ENST00000640021 TESK2Q96S53 571 aa16.52■□□□□ 0.24
NOTCH2-208ENST00000640021 ABCC1P33527 1531 aa16.52■□□□□ 0.24
NOTCH2-208ENST00000640021 INSRP06213 1382 aa16.51■□□□□ 0.23
NOTCH2-208ENST00000640021 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
NOTCH2-208ENST00000640021 RNF17Q9BXT8 1623 aaKnown RBP16.5■□□□□ 0.23
NOTCH2-208ENST00000640021 ZMYM4Q5VZL5 1548 aa16.5■□□□□ 0.23
NOTCH2-208ENST00000640021 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
NOTCH2-208ENST00000640021 STAC3Q96MF2 364 aa16.49■□□□□ 0.23
NOTCH2-208ENST00000640021 RTEL1-TNFRSF6BF6WH68 1400 aa16.48■□□□□ 0.23
NOTCH2-208ENST00000640021 PANK3Q9H999 370 aa16.48■□□□□ 0.23
NOTCH2-208ENST00000640021 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
NOTCH2-208ENST00000640021 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
NOTCH2-208ENST00000640021 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
NOTCH2-208ENST00000640021 SPAG9O60271 1321 aaKnown RBP16.47■□□□□ 0.23
NOTCH2-208ENST00000640021 TRAPPC8Q9Y2L5 1435 aa16.47■□□□□ 0.23
NOTCH2-208ENST00000640021 CC2D1BQ5T0F9 858 aaKnown RBP16.46■□□□□ 0.23
NOTCH2-208ENST00000640021 CLASP1Q7Z460 1538 aa16.46■□□□□ 0.23
NOTCH2-208ENST00000640021 CEP152O94986 1710 aa16.45■□□□□ 0.22
NOTCH2-208ENST00000640021 TRPM2O94759 1503 aa16.44■□□□□ 0.22
NOTCH2-208ENST00000640021 MADDQ8WXG6 1647 aa16.44■□□□□ 0.22
NOTCH2-208ENST00000640021 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
NOTCH2-208ENST00000640021 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
NOTCH2-208ENST00000640021 BLMP54132 1417 aaPredicted RBP16.43■□□□□ 0.22
NOTCH2-208ENST00000640021 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
NOTCH2-208ENST00000640021 SALL2Q9Y467 1007 aaPredicted RBP16.42■□□□□ 0.22
NOTCH2-208ENST00000640021 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
NOTCH2-208ENST00000640021 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
NOTCH2-208ENST00000640021 PTPRTO14522 1441 aa16.41■□□□□ 0.22
NOTCH2-208ENST00000640021 KANK1Q14678 1352 aa16.4■□□□□ 0.22
NOTCH2-208ENST00000640021 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
NOTCH2-208ENST00000640021 TET3O43151 1660 aa16.4■□□□□ 0.22
NOTCH2-208ENST00000640021 KNSTRNQ9Y448 316 aa16.39■□□□□ 0.21
NOTCH2-208ENST00000640021 AFAP1Q8N556 730 aa16.39■□□□□ 0.21
NOTCH2-208ENST00000640021 SCAF11Q99590 1463 aaKnown RBP16.39■□□□□ 0.21
NOTCH2-208ENST00000640021 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
NOTCH2-208ENST00000640021 WDR7Q9Y4E6 1490 aa16.38■□□□□ 0.21
NOTCH2-208ENST00000640021 CLTCL1P53675 1640 aa16.37■□□□□ 0.21
NOTCH2-208ENST00000640021 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
NOTCH2-208ENST00000640021 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
NOTCH2-208ENST00000640021 SYNMO15061 1565 aa16.37■□□□□ 0.21
NOTCH2-208ENST00000640021 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
NOTCH2-208ENST00000640021 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
NOTCH2-208ENST00000640021 ATP7AQ04656 1500 aa16.36■□□□□ 0.21
NOTCH2-208ENST00000640021 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
NOTCH2-208ENST00000640021 CDCA7LQ96GN5 454 aa16.35■□□□□ 0.21
NOTCH2-208ENST00000640021 NOP58Q9Y2X3 529 aaKnown RBP16.35■□□□□ 0.21
NOTCH2-208ENST00000640021 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms